Search Results for "gnu" - Page 8
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Showing 474 open source projects for "gnu"
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The EasyDIAg toolbox allows the calculation of inter-rater agreement timed-event sequential data taking into account errors of commission and ommision.
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mcompartments
A Matlab/GNU Octave package for dynamic box models
A Matlab/GNU Octave package for dynamic box models with any number of species and compartments. Box models are useful to study the dynamics of chemicals within systems that can be described by different compartments (e.g. environmental systems). -
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PRIN-3D (PRoto-code for Internal flows modeled by Navier-Stokes equations in 3-Dimensions) is a CFD code written in MATLAB, with turbulent and reactive capabilities.
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gnumex
Compile matlab mex files with gcc on Windows Platforms
Gnumex is a package that allows Matlab mex and engine files written in C, C++, Fortran 77 or Fortran 95 to be compiled with MinGW (or Cygwin) MS Windows versions of gcc, gfortran or g95. NOTE: Newer versions of Matlab now natively support Mingw, negating the need for this package. -
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MIST
A MATLAB toolbox to simulate optical systems
Modal Interferometer Simulation Tool (MIST) is a MATLAB toolbox that can simulate arbitrary resonant optical systems in the paraxial beam approximation. It allows the user to define any optical setup (composed typically of laser sources, mirrors, lenses, electro-optical modulators and detectors) and to compute the static laser field at any point. It uses a Hermite-Gauss modal decomposition to simulate diffraction limited optics. This tool is being developed mainly for simulation of large... -
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Elastic network models (ENMs) have been shown to generate the dominant functional equilibrium motions of biomolecules quickly and efficiently. MAVEN simplifies ENM generation, allows for diverse models to be used, and facilitates useful analyses.
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PlaTypUS
Plasmodium Typing Utility Software
The goal of PlaTypUS is to establish a unified Plasmodium whole genome analysis tool, that aligns short read sequences in an agreed upon manner, with many quality control steps, and calls both SNVs and CNVs in a community agreed standard way. We also seek to provide this analysis in a stand-alone graphic user interface so that labs around the world can analyze their own whole genome sequencing data, rather than relying on outside institutes. -
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Software for automated acquisition and analysis of paleomagnetic and rock magnetic data using the RAPID System.
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RIPE (Regulatory network Inference from joint Perturbation and Expression data) is a novel three-step method that integrates both perturbation data and steady state gene expression data in order to estimate a regulatory network. The ripe package is written in R, with additional functionality provided by a MATLAB executable file. The executable file uses a runtime engine called the MATLAB Compiler Runtime (MCR). The executable for different architectures is distributed on this site together...
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md-toolbox
MATLAB development tools
Functions and utilities are provided that are frequently used in MATLAB applications: handling of variable input (varargin), database handling, parsing m-files for specific tags It contains also an automated SVN-watcher / build system. -
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Visualization and clustering analysis of X-Ray diffraction data from combinatorial thin film libraries.
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OpenNEC is an open-source program based on the NEC2 core. NEC2 is a method-of-moments simulation and analysis tool for antennas and conductive structures such as metal towers. The current goal of the project is to recode the NEC2 core from ForTran into Octave and Matlab for cross platform use as a simulation and analysis tool with the powerful graphics and mathematical capabilities of those programs.
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pymatlab
A pythonic interface to MATLAB
This package lets Python users interface and communicate with MATLAB from Python. Pymatlab makes it easier for users to integrate a project with a large MATLAB codebase into python scripts by using MATLAB scripts as a part of the python program. The basic functionality of this package is to send data from Python to MATLAB's workspace to be able to run Matlab function on the data. After processing you retrieve back data to... -
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Utility to create and use a SRS database for pyroshock. Integrate search function to find the best SRS inside the whole database.
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FluxModules
Module Computation for Metabolic Networks
Genome Scale Metabolic Networks are complex systems, Modules help to break them down and hence ease understanding and algorithmic complexity. FluxModules is a toolbox with code for module detection and module visualization. -
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A Matlab based project for tracking cell nuclei in 3D space over time from live imaging data. (Sample images and lineage data are available under "Files".)
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illustrative_progs
collection of illustrative programs:small games, simulators: C, Matlab
a collection of small and medium-sized simulation programs that I made explicitely for dydactic and/or documentation purposes. Browse the files, don't click on widnload because there are multiple zips!! All are related to rigidbody dynamics used to make vehicle simulators in the simplest way. Other types of programs may figure too: Snake or Tetris in C for showing the C programming style opted for the other, more specific programs. Possibly this is a link for supplying material to some... -
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MATLABStarter
Dynamically creates MATLAB path and updates code repositories
A startup function for MATLAB that dynamically adds MATLAB m files, Java folders and .jar archives in user-defined folders and optionally updates any subversion or git working copies found. -
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avimmir
(audio, video, image) Multimedia Multimodal Information Retrieval
audio classification; speaker segmentation; speaker clustering; speaker recognition; spoken document retrieval; image retrieval; video retrieval; etc. -
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mVision library is a set of functions related with computer vision programmed in Matlab. Also include a couple of GUIs for test visually the functions.
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MCTIMME
Microbial Counts Trajectories Infinite Mixture Model Engine
MCTIMME is a nonparametric Bayesian computational framework for analyzing microbial time-series data.The current implementation is in Matlab. -
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