Search Results for "software" - Page 5
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Showing 274 open source projects for "software"
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lpACLib
An Open-Source Library for Low-Power Approximate Computing Modules
The “lpACLib” library contains the VHDL description of accurate and approximate versions of several arithmetic modules (like adders and multiplier of different bit-widths) and accelerators. Moreover, it also provides the corresponding software behavioral models/implementations developed in C and MATLAB to enable quality characterization. Besides our novel designs, it also contains implementations for several state-of-the-art arithmetic modules and their approximate versions. This open-source library facilitates research and development in approximate computing at higher abstraction levels, and to facilitate reproducible research and comparisons. ... -
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MATLAB Schemer
Apply and save color schemes in MATLAB with ease
MATLAB Schemer is a utility that makes it simple to import, apply, and export color scheme themes for MATLAB’s user interface and editor. It enables transferring customized themes between MATLAB installations or sharing color schemes among users. This MATLAB package makes it easy to change the color scheme (a.k.a. theme) of the MATLAB display and GUI. Color schemes can be easily imported by running schemer_import at the MATLAB command prompt, without needing any inputs. This will open a GUI... -
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This project houses software to analyze data acquired from electrophysiology experiments. Currently, we have an Octave/MATLAB program to analyze electroneurogram traces of coupled oscillators, and a Perl library for the analysis of voltage trace data
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Mass-based dissimilarity
A data dependent dissimilarity measure based on mass estimation.
...The presentation video in KDD 2016 is published on https://youtu.be/eotD_-SuEoo . Since this software is licensed under the Gnu General Public license GPLv3, any derivative work must be licensed under the GPL as well. This software is free only for non-commercial use. For commercial projects, it is possible to obtain a commercial license through the Commercial Services of Federation University Australia. Please email the first author of the original paper tingkm@nju.edu.cn for any inquiries about this software. -
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CRFasRNN
Semantic image segmentation method described in the ICCV 2015 paper
...Our work allows computers to recognize objects in images, what is distinctive about our work is that we also recover the 2D outline of objects. Currently we have trained this model to recognize 20 classes. This software allows you to test our algorithm on your own images – have a try and see if you can fool it, if you get some good examples you can send them to us. CRF-RNN has been developed as a custom Caffe layer named MultiStageMeanfieldLayer. Usage of this layer in the model definition prototxt file looks the following. Check the matlab-scripts or the python-scripts folder for more detailed examples. -
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Waterloo
Java-based scientific graphics
Java-based scientific graphics with support for Java, Groovy, MATLAB, Python, the R statistical environment, Scala and SciLab. -
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MS2Browser
LC-MS/MS data browser designed for siderophore analysis
...Some of the functionality and use of MS2Browser is described as part as an open-access book chapter: http://www.intechopen.com/books/applications-from-engineering-with-matlab-concepts/small-molecule-lc-ms-ms-fragmentation-data-analysis-and-application-to-siderophore-identification A siderophore structural database assembled for this project can be found alongside the MS2Browser software (.cfw format to be used with ChemBioFinder(TM) ). NOTE: The program is written for personal use to assist siderophore analysis using high-resolution LC-MS/MS data. Please contact me if you have any questions about its use, bugs, etc. -
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Toastpp
Forward and inverse modelling in optical tomography
Toast++ is a C++ software package for modelling light transport in scattering media using the finite element method. It allows 3D reconstruction of absorption and scattering distributions inside an object from boundary measurements of light transmission, using steady state, time domain or frequency domain information. Matlab and Python bindings exist for ease of use and fast prototyping. -
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cbsPlot
A Matlab standalone application for Coherent Back Scattering analysis
This software will be extremely useful for researchers involved in the analysis of data in coherent back scattering experiments to characterize optical media such as random structures, light harvesting materials and random laser media. Specific features in this program enables easy, fast and reliable evaluation of the mean free path of light in random media along with error estimation. -
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ChelomEx
Isotope assisted discovery of metal chelating agents from LC-MS data
...A built-in graphical user interface and compound library aid in the efficient evaluation of the results. If you use ChelomEx for your research, please cite our Analytical Chemistry paper that describes the software (http://dx.doi.org/10.1021/ac503000e). To comment, send bug reports or suggestions for additional features to be implemented in future versions please send me a message. The current version ChelomEx 1.2 from 06 January 2016 includes the following changes to the original version (ChelomEx 1.0): - function to filter discovered isotope patterns after the first analysis step (isotope pattern search), accessible in the Isotope Pattern toolbar (v1.2) - updates for compatibility with MatLab versions after 2014b (v1.2) - siderophore database update (v1.1) - can now also analyze negative mode data (v1.1) - bug fixes (v1.1) -
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RAFTS3
Rapid Alignment Free Tool for Sequences Similarity Search
...RAFTS3 is a new alternative for fast comparison of protein sequences, genome annotation and biological data mining. Preprint: http://dx.doi.org/10.1101/055269 Precomputed databases evaluated on paper are available for download at http://www.bioinfo.ufpr.br/software/rafts3 -
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CAHST
Canopy height Statistic extraction from terrestrial laser scanner data
The software is made for generating canopy height statistics of terrestrial laser scanning (TLS) data. It is written in Matlab and compiled for standalone usage in Version 2013b 64 Bit on Windows. For running it, MS Excel and the Matlab MCR 2013b (available for free at http://ch.mathworks.com/products/compiler/mcr/) must be installed on the computer. -
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FieldTrip
The MATLAB software toolbox for MEG and EEG analysis
FieldTrip is the Matlab toolbox for EEG and MEG data. It includes algorithms for simple and advanced analysis, such as importing, preprocessing, time-frequency analysis, source reconstruction, statistical testing and connectivity analysis. -
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Spatio-Kemporal kriging
Spatio-Kemporal forecast
The Spatio-temporal Kriging is a small software for kriging. The main function of this software including: 1. This software have both Chinese and English speech interfaces; 2. Supports three kinds of time data format(day,month and year; 3. Analysis of basic statistics and normal distribution inspection; 4. Spatio-temporal Semi-variance Calculating; 5. Spatio-temporal model curvefitting of both separable and non-separable models; 6. -
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GeoPDEs
A package for Isogeometric Analysis in Octave and Matlab
GeoPDEs is a suite of software tools for research on Isogeometric Analysis of PDEs. GeoPDEs is free software implemented in Octave and fully compatible with Matlab. GeoPDEs is no longer developed at SF, and has moved to GitHub. Please visit http://rafavzqz.github.io/geopdes/ The mailing list will remain active. Releases up to 2.0.4 can be found here. From version 2.1.0 onward, see https://github.com/rafavzqz/geopdes -
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lasYmat provides a set of Matlab routines for reading and writing LAS files. LAS is a world wide Oil & Gas industry standard for distribution of Well Log data.
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aslm
aslm - a slightly modified asl-module
...Portions of the code rely heavily on (or are copied from) SPM (http://www.fil.ion.ucl.ac.uk/spm), marsbar (http://marsbar.sourceforge.net, Matthew Brett et al.), and GIFT (Group ICA of fMRI Toolbox v.1.3, http://mialab.mrn.org/software/gift/ )which are also released under the GNU public licence. The ASL subtraction-routine is originally from H.Y. Rao & J.J. Wang, @CFN, UPenn Med, 07/2004. -
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Matlab software for analysis of skin conductance data (SC; viz., electrodermal activity, EDA; galvanic skin response, GSR). Data decomposition and scientific analysis based on deconvolution approach. Various functions via GUI or batch-mode.
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AEO-Light 1.1
Version 1.1 is no longer supported.
Version 1.1 is no longer supported. Please see the new version at https://usc-imi.github.io/aeo-light/ Description for 1.1 continues below: AEO-Light 1.1 is an open-source software application that takes a digital scan of motion picture film with optical sound tracks and directly reproduces the audio, producing as a result a synchronized sound film file. Funded by a grant from the National Endowment for the Humanities and by the University of South Carolina. -
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IBEX_MDA
An open infrastructure software to facilitate radiomics research.
...The latest stand-alone version can be downloaded at http://bit.ly/IBEX_MDAnderson The latest source-code version can be downloaded at http://bit.ly/IBEXSrc_MDAnderson IBEX (imaging biomarker explorer) is an open infrastructure software platform that flexibly supports common radiomics workflow tasks such as multimodality image data import and review, development of feature extraction algorithms, model validation, and consistent data sharing among multiple institutions. IBEX software package was developed using the MATLAB and C/C++ programming languages. The software architecture deploys the modern model-view-controller, unit testing, and function handle programming concepts to isolate each quantitative imaging analysis task, to validate if their relevant data and algorithms are fit for use, and to plug in new modules. -
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mlUnit
MATLAB unit test framework
mlUnit is a unit testing framework for the MATLAB .m language. It considers the patterns of the xUnit family, include assertions, test cases and suites as well as the fixture. In contrast to MATLAB's own unit test framework: * mlUnit output jUnit compatible XML reports * mlUnit is compatible with Your MATLAB (not just R2013b), down to at least R2006b * mlUnit offers specialised assert functions, e.g. assert_empty, assert_warning, and many more. slUnit is a unit testing framework for... -
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ControllerTester
An automated controller testing tool
Copyright 2014 Alvin Stanescu, Software Engineering Chair @ Technische Universitaet Munchen Licensed under the Apache License, Version 2.0. Please refer to https://github.com/AlvinStanescu/ControllerTester/blob/master/README.md for further details. -
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detectIR
Detection of Perfect and Imperfect Inverted Repeats
detectIR - a MATLAB-based tool for detecting perfect and imperfect inverted repeats in genomes. [1] Who are we? Please visit website: http://bioinfolab.miamioh.edu [2] How to cite detectIR? Ye C, Ji G, Li L, Liang C (2014) detectIR: A Novel Program for Detecting Perfect and Imperfect Inverted Repeats Using Complex Numbers and Vector Calculation. PLoS ONE 9(11): e113349. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0113349 [3] detectIR user manual... -
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SCRalyze
A matlab environment for model-based psychophysiology
SCRalyze is a powerful tool for model-based analysis of psychophysiological signals, using linear convolution models and dynamic causal modelling. A flexible import interface and many utilities make this software a standalone tool. IMPORTANT: As of 04.11.2019, the official code repository for PsPM (formerly SCRalyze) has been moved to https://github.com/bachlab/PsPM . In order to check the latest releases, discussion and bug reports, please refer to our new repository. Although this website will maintained to provide further releases, there will be no active development on the SVN repository. ... -
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ApproxAdderLib
Library of Approximate Adders
We provide MATLAB and Verilog Models of GeAr, and previously proposed adders (ACA-I, ETAII, ACA-II and GDA) at http://sourceforge.net/projects/approxadderlib/ GeAr is a low latency Generic Accuracy Configurable Adder that provides a higher number of potential configurations compared to state-of-the-art approximate adders, thus enabling a high degree of flexibility and trade-off between performance and output quality. These MATALB and Verilog models can allow software programmer as well as hardware designers to evaluate their code and design. To the best of our knowledge, this is the first open-source library of approximate adders that facilitates reproducible comparisons and further research and development in this direction across various layers of design abstraction. This work is a result of collaborative effort between Chair for Embedded Systems (CES) at Karlsruhe Institute of Technology (KIT), Germany and Vision Image and Signal Processing (VISpro) Lab at SEECS-NUST, Pakistan.
