Search Results for "packages"
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Showing 39 open source projects for "packages"
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Gonum
Set of numeric libraries for the Go programming language
Gonum is a set of numeric libraries for the Go programming language. It contains libraries for matrices, statistics, optimization, and more. Gonum is a set of packages designed to make writing numerical and scientific algorithms productive, performant, and scalable. Gonum contains libraries for matrices and linear algebra; statistics, probability distributions, and sampling; tools for function differentiation, integration, and optimization; network creation and analysis; and more. We encourage you to get started with Go and Gonum if you are tired of sluggish performance, and fighting C and vectorization, and also if you are struggling with managing programs as they grow larger. ... -
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R packages (maintained by YJLEE)
R packages for PK/PD modeling , BE/BA, drug stability, ivivc, etc.
These R packages are developed for data analysis of PK/PD modeling & simulation, bioequivalence/bioavailability (BE/BA), drug stability, in-vitro and in-vivo correlation (ivivc), as well as therapeutic drug monitoring (TDM). -
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PyTorch Geometric
Geometric deep learning extension library for PyTorch
...In addition, it consists of an easy-to-use mini-batch loader for many small and single giant graphs, a large number of common benchmark datasets (based on simple interfaces to create your own), and helpful transforms, both for learning on arbitrary graphs as well as on 3D meshes or point clouds. We have outsourced a lot of functionality of PyTorch Geometric to other packages, which needs to be additionally installed. These packages come with their own CPU and GPU kernel implementations based on C++/CUDA extensions. We do not recommend installation as root user on your system python. Please setup an Anaconda/Miniconda environment or create a Docker image. We provide pip wheels for all major OS/PyTorch/CUDA combinations. -
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JuMP
Modeling language for Mathematical Optimization
JuMP is a modeling language and collection of supporting packages for mathematical optimization in Julia. JuMP makes it easy to formulate and solve a range of problem classes, including linear programs, integer programs, conic programs, semidefinite programs, and constrained nonlinear programs. JuMP is used to solve large-scale inventory routing problems at Renault, schedule trains at Thales Inc., plan power grid expansion at PSR, and route school buses. -
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Hecke.jl
Computational algebraic number theory
Hecke is a software package for algebraic number theory maintained by Claus Fieker, Tommy Hofmann and Carlo Sircana. It is written in julia and is based on the computer algebra packages Nemo and AbstractAlgebra. Hecke is part of the OSCAR project and the development is supported by the Deutsche Forschungsgemeinschaft DFG within the Collaborative Research Center TRR 195. -
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Integrals.jl
A common interface for quadrature and numerical integration
Integrals.jl is an instantiation of the SciML common IntegralProblem interface for the common numerical integration packages of Julia, including both those based upon quadrature as well as Monte-Carlo approaches. By using Integrals.jl, you get a single predictable interface where many of the arguments are standardized throughout the various integrator libraries. This can be useful for benchmarking or for library implementations since libraries that internally use a quadrature can easily accept an integration method as an argument. -
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SciPy
SciPy library main repository
This is the main repository for the SciPy library, one of the core packages that make up the SciPy stack. SciPy is an open source software used in the fields of mathematics, science, and engineering, with modules for statistics, optimization, integration, linear algebra, signal and image processing, and many more. The SciPy library contains many of the user-friendly and efficient numerical routines, including those for numerical integration, interpolation, and optimization. ... -
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broom
Convert statistical analysis objects from R into tidy format
broom is part of the tidymodels ecosystem that converts statistical model outputs (e.g. from lm, glm, t.test, lme4, etc.) into tidy tibbles — standardized data frames — using functions tidy(), glance(), and augment(). These are easier to manipulate, visualize, and report programmatically. -
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DifferentialEquations.jl
Multi-language suite for high-performance solvers of equations
...At the same time, it wraps the classic C/Fortran methods, making it easy to switch over to them whenever necessary. Solving differential equations with different methods from different languages and packages can be done by changing one line of code, allowing for easy benchmarking to ensure you are using the fastest method possible. -
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Swift Numerics
Advanced mathematical types and functions for Swift
Swift Numerics is a foundational library that extends the Swift standard library with essential numerical protocols, types, and functions needed for scientific and systems programming. It defines generic abstractions over real and complex numbers so algorithms can be written once and work across concrete floating-point types. The package includes RealModule utilities and a full Complex type with the expected arithmetic and transcendental functions, bridging a long-standing gap for numerics... -
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statsmodels
Statsmodels, statistical modeling and econometrics in Python
statsmodels is a Python module that provides classes and functions for the estimation of many different statistical models, as well as for conducting statistical tests, and statistical data exploration. An extensive list of result statistics are available for each estimator. The results are tested against existing statistical packages to ensure that they are correct. The package is released under the open source Modified BSD (3-clause) license. Generalized linear models with support for all of the one-parameter exponential family distributions. Markov switching models (MSAR), also known as Hidden Markov Models (HMM). Vector autoregressive models, VAR and structural VAR. ... -
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OrdinaryDiffEq.jl
High performance ordinary differential equation (ODE)
...At the same time, it wraps the classic C/Fortran methods, making it easy to switch over to them whenever necessary. Solving differential equations with different methods from different languages and packages can be done by changing one line of code, allowing for easy benchmarking to ensure you are using the fastest method possible. -
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Mathpaqs
A collection of mathematical packages in pure Ada
Various mathematical packages including algebra, finite elements, random variables, probability dependency models, unlimited integers. Pure Ada, fully portable. More information on... http://mathpaqs.sf.net Alire crate: https://alire.ada.dev/crates/mathpaqs Mirror: https://github.com/zertovitch/mathpaqs -
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stkpp
C++ Statistical ToolKit
STK++ (http://www.stkpp.org) is a versatile, fast, reliable and elegant collection of C++ classes for statistics, clustering, linear algebra, arrays (with an Eigen-like API), regression, dimension reduction, etc. Some functionalities provided by the library are available in the R environment as R functions (http://cran.at.r-project.org/web/packages/rtkore/index.html). At a convenience, we propose the source packages on sourceforge. The library offers a dense set of (mostly) template classes in C++ and is suitable for projects ranging from small one-off projects to complete data mining application suites. -
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LMath library
Math library for Free Pascal and Lazarus.
...LMath provides routines and demo programs for numerical analysis, including mathematical functions, probabilities, matrices, optimization, linear and nonlinear equations, integration, Fast Fourier Transform, random numbers, curve fitting, statistics and graphics. It is organized s set of lazarus packages which makes it easily extensible and helps to include only really needed features in your project. -
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Euler Math Toolbox
Numerical and Symbolic Math Tool
Euler is a powerful all-in-one numerical software and includes Maxima for seamless symbolic computations. Euler supports Latex for math display, Povray for photo-realistic 3D scenes, Python, Matplotlib and C for scripting, and contains a full programming language. Features include libraries for numerical algorithms, optimization, plotting in 2D and 3D, graphics export, a complete help system, tutorials and examples. Euler runs in Windows natively, or in Linux via Wine. It is completely... -
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TXM
Unicode XML TEI text analysis platform
...rubrique61&lang=en TXM offers a comprehensive range of analysis tools (concordances, collocate search, frequency lists, etc.) based on the powerfull CQP full text search engine (http://cwb.sourceforge.net) and a range of statistical functions (factorial analysis, classification, cooccurrency analysis, etc.) based on R packages (http://www.r-project.org). Read the scientific background at the Textométrie project web site http://textometrie.ens-lyon.fr/?lang=en. Read a full description at the TEI Tools wiki http://wiki.tei-c.org/index.php/TXM. -
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DimensionalAnalysis
Performs dimensional analysis from cells in a spreadsheet.
...Use the names in the formulas, not the cell addresses. To use the Dimension Analysis tool, select and copy the cells, then paste them into the tool’s input text box. Requires Python 3 plus SymPy and mpmath packages. http://www.sympy.org http://mpmath.org/ -
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JCycles
[frozen] A library for computing cycles in graphs or in Java code.
[This project is frozen, but has an offspring with more features: https://github.com/jeffhain/jadecy ] JCycles provides treatments to compute cycles, or just strongly connected components, in directed graphs in general, or in classes or packages dependencies graphs parsed from class files (major version <= 51, else does best effort). It uses Tarjan's algorithm for SCCs, and Johnson's for cycles, with continuations instead of recursion, which allows to handle large graphs (< Integer.MAX_VALUE vertices). Requires Java 5 or later. -
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JSci - A science API for Java
A science API for Java
JSci is a set of open source Java packages. The aim is to encapsulate scientific methods/principles in the most natural way possible. As such they should greatly aid the development of scientific based software. -
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GENIE (GEne-geNe IntEraction)
GPU based Parallel Gene-Gene Interaction Analysis
...Most of the latest Central Processing Units (CPUs) have multiple cores, whereas Graphics Processing Units (GPUs) also have hundreds of cores and have been recently used to implement faster scientific software. However, currently there are no genetic analysis software packages that allow users to fully utilize the computing power of these multi-core devices for genetic interaction analysis for binary traits. Here we present a novel software package GENIE, which utilizes the power of multiple GPU or CPU processor cores to parallelize the interaction analysis. Citation: Chikkagoudar, S., Wang, K., & Li, M. (2011). ... -
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EnvStats
An R Package for Environmental Statistics
...EnvStats brings the major environmental statistical methods found in the literature and regulatory guidance documents into one statistical package, along with an extensive hypertext help system that explains what these methods do, how to use these methods, and where to find them in the environmental statistics literature. Also included are numerous built-in data sets from regulatory guidance documents and the environmental statistics literature. EnvStats combined with other R packages (e.g., for spatial analysis) provides the environmental scientist, statistician, researcher, and technician with tools to “get the job done!” -
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Javafastcomplex
Javafastcomplex has both mutable and immutable complex numbers
Javafastcomplex is a fast complex number package for Java. Most existing complex number packages implement only immutable complex numbers, which is easy to understand given that immutable objects lead to more understandable code. Mutable complex numbers would avoid garbage-collection penalty and therefore be faster in calculations. Javafastcomplex implements both mutable and immutable complex numbers, and has a common interface for both, allowing users to write functions that can take either a mutable or an immutable complex number as an argument. ... -
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latexdiff is a Perl script, which compares two latex files and marks up significant differences between them (i.e. a diff for latex files). Various options are available for visual markup using standard latex packages such as "color.sty".
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Matheval is a library designed for evaluating mathematical expressions. My inspiriation for creating matheval comes from such packages as Maple or Mathematica. I wanted to be able to do some of those sorts of things from within Euphoria.
