Search Results for "code analysis"
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Showing 38 open source projects for "code analysis"
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Gonum
Set of numeric libraries for the Go programming language
...Gonum contains libraries for matrices and linear algebra; statistics, probability distributions, and sampling; tools for function differentiation, integration, and optimization; network creation and analysis; and more. We encourage you to get started with Go and Gonum if you are tired of sluggish performance, and fighting C and vectorization, and also if you are struggling with managing programs as they grow larger. Get Gonum if you want code to be fully transparent, and want the ability to read the source code you use. It is useful if you’d like a compiler to catch mistakes early, but hate fighting linker and unintelligible compile errors. -
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MCM-ICM
Mathematical Contest resources
...The contents skew toward MATLAB and LaTeX, reflecting the tools most winning teams use to build models and typeset their reports; you’ll typically see complete write-ups alongside code that implements optimization, simulation, statistical analysis, or other modeling pipelines. -
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Uranie
Uranie is CEA's uncertainty analysis platform, based on ROOT
Uranie is a sensitivity and uncertainty analysis plateform based on the ROOT framework (http://root.cern.ch) . It is developed at CEA, the French Atomic Energy Commission (http://www.cea.fr). It provides various tools for: - data analysis - sampling - statistical modeling - optimisation - sensitivity analysis - uncertainty analysis - running code on high performance computers - etc. -
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The continuous medial representation is a method for object representation and shape analysis. Hosted on Sourceforge are the source code for routines that fit medial models to anatomical objects.
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sequoia-dap
SEQUOIA ocean data assimilation platform (a SIROCCO suite tool)
...*Please note that due to frequent updates the code is only available via the svn repository. Please get in touch with us to obtain access.* -
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CSI-Math-Notation-PostfixInfix
Perl Lib Math Notation
* Introduction: - This Module is a Library based Perl code. - The library provide: - Convert INFIX expressions to POSTFIX; - Convert POSTFIX expressions to INFIX and; - Perform POSTFIX context validations. - Context validation can be implemented in item selection routines or data context validation, when it is possible to identify data to be selected or ignored in some data analysis process -
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MAGeCK
Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout
Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens technology. For instructions and documentations, please refer to the wiki page. MAGeCK is developed by Wei Li and Han Xu from Dr. Xiaole Shirley Liu's lab at Dana-Farber Cancer Institute/Harvard School of Public Health, and is maintained by Wei Li lab at Children's National Medical Center. We thank the support... -
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lpsolve
Mixed Integer Linear Programming (MILP) solver.
Mixed Integer Linear Programming (MILP) solver lp_solve solves pure linear, (mixed) integer/binary, semi-cont and special ordered sets (SOS) models.lp_solve is written in ANSI C and can be compiled on many different platforms like Linux and WINDOWS This project is moved to github: https://lp-solve.github.io/ -
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smib is one of the smallest and simplest computer algebra system in the world, but simple does not mean simplistic. Using smib you can explore many branches of mathematics (e.g. number theory, algebra, calculus, numerical analysis, differential geometry, probability and stochastic calculus) and also some physics (e.g. electromagnetism and quantum mechanics).. By simple you can understand easy to program (smib is a dynamically typed language, with strong affinity to recursivity, programs are often short and powerful and maybe useful for teaching), and also easy to modify (source code is free, written in C language, and based on notions of stacks and lists). ...
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Accord.NET Framework
Scientific computing, machine learning and computer vision for .NET
The Accord.NET Framework provides machine learning, mathematics, statistics, computer vision, computer audition, and several scientific computing related methods and techniques to .NET. The project is compatible with the .NET Framework. NET Standard, .NET Core, and Mono. -
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A Matlab software routine to perform Principal Component Analysis using Covariance, Correlation or Comedian as the criterion. Though, initially developed for experiments related to fretting wear but can be effectively used to interpret experimental data from any field. The attached files contain source code as well as a sample MATLAB (.mat) data file of 13 variables. It could be replaced to the data file of your choice.
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Ship Lock Scheduling
Scheduling lockages at ship locks with several parallel lock chambers
This Java software includes algorithms of combinatorical optimization for the NP-hard offline ship lock scheduling problem. Solutions and performed computations can be displayed graphically. Besides, there is a framework for generating test instances and running these in parallel, as well as R/JGR code for statistical evaluation. Some tools for estimating the quality of calculated solutions will be further improved. Initially the software was developed within a project of TU Berlin regarding... -
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OCaml interface to FFTW3 -- the Fastest Fourier Transform in the West! (http://www.fftw.org/). The code is developed at https://github.com/Chris00/fftw-ocaml
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A More Accurate Fourier Transform
Computes Accurate Fourier Transform via Explicit Integration not FFT
...Fast Fourier transform (FFT) methods offer speed advantages over evaluation of explicit integrals (EI) that define Fourier transforms. It has been shown recently that EI methods can be more accurate than FFT methods (Courtney and Courtney, A More Accurate Fourier Transform) for scientific data analysis and that EI methods can be implemented in reasonable times with modern computing power. This project makes the source code (and command line Windows executable) developed in that study openly available for scientific and engineering uses. -
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DEAPathways
Differential Expression Analysis for Pathways
This project contains the source code associated with the PLoS Computational Biology publication: "Differential Expression Analysis for Pathways". The paper text can be found here: http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1002967 -
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wmtsa-python
Discrete wavelet methods for time series analysis using python
Several python libraries implement discrete wavelet transforms. However, none of them, or at least none that I know, is aimed at scientific use. This library aims at filling this gap, in particular considering discrete wavelet transform as described by Percival and Walden. This module started as translation of the wmtsa Matlab toolbox (http://www.atmos.washington.edu/~wmtsa/), so most naming conventions and most of the code structure follows their choices. The code uses a mix of python and... -
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A collection of code, bundled into a single R package, to perform several aspects of data management, image pre-processing, data analysis and statistical inference related to the quantitative analysis of dynamic contrast-enhanced MRI (DCE-MRI).
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TIDES
Taylor series Integrator for Differential Equations
Taylor series Integrator for Differential EquationS. This software is developed by Profs. A. Abad, R. Barrio, F. Blesa and M. Rodriguez, (GME, University of Zaragoza, Spain). It consists on a C (Fortran) library, libTIDES, and a Mathematica package, MathTIDES. (MathTIDES requires Mathematica version >= 7.0) . Basic references: * A. Abad, R. Barrio, F. Blesa, M. Rodriguez, 2012. Algorithm 924: TIDES, a Taylor series Integrator for Differential EquationS, ACM TOMS. 39, no. 1, art. 5.... -
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JCycles
[frozen] A library for computing cycles in graphs or in Java code.
[This project is frozen, but has an offspring with more features: https://github.com/jeffhain/jadecy ] JCycles provides treatments to compute cycles, or just strongly connected components, in directed graphs in general, or in classes or packages dependencies graphs parsed from class files (major version <= 51, else does best effort). It uses Tarjan's algorithm for SCCs, and Johnson's for cycles, with continuations instead of recursion, which allows to handle large graphs (<... -
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GridPACK is a community-developed open-source collection of code for use in power systems research, analysis, and operation.
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This utility, lingen, implements evolution of native machine code via linear genetic programming. The assembly level code uses a subset of assembly language which manipulates and performs calculations using the floating point unit (FPU) of the CPU.
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The fast2armc program translates source code of a counter automata model for FAST(er) tool to the ARMC prolog syntax.
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ShiVaSmiles
A slick interface to see various scale analysis algorithms in action.
...The main website is built as a wiki gathering info and examples on the various implemented algorithms. The combination of the application and its wiki intend to constitute a nice little pedagogic toolkit for multiscale analysis. Feel free to contribute code or wiki content ! -
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A program for exploring complex functions, much like the now out-dated f(z). Domain colored plots of complex functions. Click evaluate. Uses reflection so you can code almost anything for your formula. All java. Please help.
