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Easy Machine Learning is a general-purpose dataflow-based system
Machine learning algorithms have become the key components in many big data applications. However, the full potential of machine learning is still far from being realized because using machine learning algorithms is hard, especially on distributed platforms such as Hadoop and Spark. The key barriers come from not only the implementation of the algorithms themselves but also the processing for applying them to real applications which often involve multiple steps and different algorithms. Our...
GNAT recognizes gene names in text and maps them to NCBI Entrez Gene
GNAT is a BioNLP/text mining tool to recognize and identify gene/protein names in natural language text. It will detect mentions of genes in text, such as PubMed/Medline abstracts, and disambiguate them to remove false positives and map them to the correct entry in the NCBI Entrez Gene database by gene ID.
March 2017: We started to upload GNAT output on Medline. See files/results/medline/.