Open Source Java Machine Learning Software
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Java Machine Learning Software
View 446 business solutionsBrowse free open source Java Machine Learning Software and projects below. Use the toggles on the left to filter open source Java Machine Learning Software by OS, license, language, programming language, and project status.
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Weka
Machine learning software to solve data mining problems
Weka is a collection of machine learning algorithms for solving real-world data mining problems. It is written in Java and runs on almost any platform. The algorithms can either be applied directly to a dataset or called from your own Java code. -
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MIT Deep Learning Book
MIT Deep Learning Book in PDF format by Ian Goodfellow
The Deep Learning textbook is a resource intended to help students and practitioners enter the field of machine learning in general and deep learning in particular. The online version of the book is now complete and will remain available online for free. MIT Deep Learning Book in PDF format (complete and parts) by Ian Goodfellow, Yoshua Bengio and Aaron Courville. An MIT Press book Ian Goodfellow and Yoshua Bengio and Aaron Courville. Written by three experts in the field, Deep Learning is the only comprehensive book on the subject. This is not available as PDF download. So, I have taken the prints of the HTML content and bound them into a flawless PDF version of the book, as suggested by the website itself. Printing seems to work best printing directly from the browser, using Chrome. Other browsers do not work as well. -
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GROBID
A machine learning software for extracting information
GROBID is a machine learning library for extracting, parsing, and re-structuring raw documents such as PDF into structured XML/TEI encoded documents with a particular focus on technical and scientific publications. First developments started in 2008 as a hobby. In 2011 the tool has been made available in open source. Work on GROBID has been steady as a side project since the beginning and is expected to continue as such. Header extraction and parsing from article in PDF format. The extraction here covers the usual bibliographical information (e.g. title, abstract, authors, affiliations, keywords, etc.). References extraction and parsing from articles in PDF format, around .87 F1-score against on an independent PubMed Central set of 1943 PDF containing 90,125 references, and around .89 on a similar bioRxiv set of 2000 PDF (using the Deep Learning citation model). All the usual publication metadata are covered (including DOI, PMID, etc.). -
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Neuroph is lightweight Java Neural Network Framework which can be used to develop common neural network architectures. Small number of basic classes which correspond to basic NN concepts, and GUI editor makes it easy to learn and use.
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UnBBayes
Framework & GUI for Bayes Nets and other probabilistic models.
UnBBayes is a probabilistic network framework written in Java. It has both a GUI and an API with inference, sampling, learning and evaluation. It supports Bayesian networks, influence diagrams, MSBN, OOBN, HBN, MEBN/PR-OWL, PRM, structure, parameter and incremental learning. Please, visit our wiki (https://sourceforge.net/p/unbbayes/wiki/Home/) for more information. Check out the license section (https://sourceforge.net/p/unbbayes/wiki/License/) for our licensing policy. -
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BagaturChess
Java Chess Engine
This is UCI Chess Engine writen in Java. Since version 1.4 (inclusive) the project was moved to https://github.com/bagaturchess/Bagatur -
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Smile
Statistical machine intelligence and learning engine
Smile is a fast and comprehensive machine learning engine. With advanced data structures and algorithms, Smile delivers the state-of-art performance. Compared to this third-party benchmark, Smile outperforms R, Python, Spark, H2O, xgboost significantly. Smile is a couple of times faster than the closest competitor. The memory usage is also very efficient. If we can train advanced machine learning models on a PC, why buy a cluster? Write applications quickly in Java, Scala, or any JVM languages. Data scientists and developers can speak the same language now! Smile provides hundreds advanced algorithms with clean interface. Scala API also offers high-level operators that make it easy to build machine learning apps. And you can use it interactively from the shell, embedded in Scala. The most complete machine learning engine. Smile covers every aspect of machine learning. -
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exchange-core
Ultra-fast matching engine written in Java based on LMAX Disruptor
Exchange-core is an open-source market exchange core based on LMAX Disruptor, Eclipse Collections (ex. Goldman Sachs GS Collections), Real Logic Agrona, OpenHFT Chronicle-Wire, LZ4 Java, and Adaptive Radix Trees. Designed for high scalability and pauseless 24/7 operation under high-load conditions and providing low-latency responses. Single order book configuration is capable to process 5M operations per second on 10-years old hardware (Intel® Xeon® X5690) with moderate latency degradation. HFT optimized. Priority is a limit-order-move operation mean latency (currently ~0.5µs). Cancel operation takes ~0.7µs, placing new order ~1.0µs. Disk journaling and journal replay support, state snapshots (serialization) and restore operations, LZ4 compression. Lock-free and contention-free order matching and risk control algorithms. Matching engine and risk control operations are atomic and deterministic. -
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Clustering Variation looks for a good subset of attributes in order to improve the classification accuracy of supervised learning techniques in classification problems with a huge number of attributes involved. It first creates a ranking of attributes based on the Variation value, then divide into two groups, last using Verification method to select the best group.
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This project contains weka packages of neural networks algorithms implementations like Learning Vector Quantizer (LVQ) and Self-organizing Maps (SOM). For more information about weka, please visit http://www.cs.waikato.ac.nz/~ml/weka/
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MEKA
A Multi-label Extension to Weka
Multi-label classifiers and evaluation procedures using the Weka machine learning framework. -
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MODLEM
rule-based, WEKA compatible, Machine Learning algorithm
This project is a WEKA (Waikato Environment for Knowledge Analysis) compatible implementation of MODLEM - a Machine Learning algorithm which induces minimum set of rules. These rules can be adopted as a classifier (in terms of ML). It is a sequential covering algorithm, which was invented to cope with numeric data without discretization. Actually the nominal and numeric attributes are treated in the same way: attribute's space is being searched to find the best rule condition during rule induction. In result numeric attribute's conditions are more precise and closely describe the class. This algorithm contains some aspects of Rough Set Theory: the class definition can be described accordingly to its lower or upper approximation. For more information, see: Stefanowski, Jerzy. The rough set based rule induction technique for classification problems. In: Proc. 6th European Congress on Intelligent Techniques and Soft Computing, vol. 1. Aachen, 1998. s. 109-113. -
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sgmweka
Weka wrapper for the SGM toolkit for text classification and modeling.
Weka wrapper for the SGM toolkit for text classification and modeling. Provides Sparse Generative Models for scalable and accurate text classification and modeling for use in high-speed and large-scale text mining. Has lower time complexity of classification than comparable software due to inference based on sparse model representation and use of an inverted index. The provided .zip file is in the Weka package format, giving access to text classification. Other functions are usable through either Java command-line commands or class inclusion into Java projects. -
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AminePlatform
Amine is a Multi-Layer Platform for the dev. of Intelligent Systems
Amine is an Artificial Intelligence Multi-Layer Java Open Source Platform dedicated to the development of various kinds of Intelligent Systems and Agents (Knowledge-Based, Ontology-Based, Conceptual Graph -CG- Based, NLP, Reasoning and Learning, Natural Language Processing, etc.). Ontology, KB can be created and manipulated with various processes. CG theory is used as the main knowledge representation language. Amine provides two languages: PROLOG+CG which extends PROLOG with CG and Amine modules, and SYNERGY which is a visual activation/propagation based language. CGs are considered by SYNERGY as activable/executable graphs. See for more detail: //amine-platform.sourceforge.net/ -
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Scene is a computer vision framework that performs background subtraction and object tracking, using two traditional algorithms and three more recent algorithms based on neural networks and fuzzy classification rules. For each detected object, Scene sends TUIO messages to one or several client applications. The present release features GPU accelerated versions of all the background subtraction methods and morphological post processing of the object blobs with dilation and erosion filters, implemented in OpenCL. The framework was mainly designed as a toolkit for the rapid development of interactive art projects that explore dynamics of complex environments. The Scene GUI runs and compiles under Windows, Linux, and MacOS X, and is available in both 32 bit and 64 bit versions.
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jMIR
Music research software
jMIR is an open-source software suite implemented in Java for use in music information retrieval (MIR) research. It can be used to study music in the form of audio recordings, symbolic encodings and lyrical transcriptions, and can also mine cultural information from the Internet. It also includes tools for managing and profiling large music collections and for checking audio for production errors. jMIR includes software for extracting features, applying machine learning algorithms, applying heuristic error error checkers, mining metadata and analyzing metadata. -
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ADAMS
ADAMS is a workflow engine for building complex knowledge workflows.
ADAMS is a flexible workflow engine aimed at quickly building and maintaining data-driven, reactive workflows, easily integrated into business processes. Instead of placing operators on a canvas and manually connecting them, a tree structure and flow control operators determine how data is processed (sequentially/parallel). This allows rapid development and easy maintenance of large workflows, with hundreds or thousands of operators. Operators include machine learning (WEKA, MOA, MEKA) and image processing (ImageJ, JAI, BoofCV, LIRE and Gnuplot). R available using Rserve. WEKA webservice allows other frameworks to use WEKA models. Fast prototyping with Groovy and Jython. Read/write support for various databases and spreadsheet applications. -
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GUAJE FUZZY
Free software for generating understandable and accurate fuzzy systems
GUAJE stands for Generating Understandable and Accurate fuzzy models in a Java Environment. Thus, it is a free software tool (licensed under GPL-v3) with the aim of supporting the design of interpretable and accurate fuzzy systems by means of combining several preexisting open source tools, taking profit from the main advantages of all of them. It is a user-friendly portable tool designed and developed in order to make easier knowledge extraction and representation for fuzzy systems, paying special attention to interpretability issues. GUAJE lets the user define expert variables and rules, but also provide supervised and fully automatic learning capabilities. Both types of knowledge, expert and induced, are integrated under the expert supervision, ensuring interpretability, simplicity and consistency of the knowledge base along the whole process. Notice that, GUAJE is is an upgraded version of the free software called KBCT (Knowledge Base Configuration Tool). -
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Moara is a biological text mining tool and consists of a Java library and some auxiliary MySQL databases for gene/protein training and extraction of mentions and its further normalization and disambiguation.
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openModeller is a complete C++ framework for species potential distribution modelling. The project also includes a graphical user interface, a web service interface and an API for Python.
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Drug Extraction
Drug name extraction
Drug name recognition and normalisation/grounding to DrugBank ids and standard names. Package provides 2 taggers: 1. DrugTagger - CRF-based with DrugBank presence feature (see feature set for details). 2. DrugnameGazetteer - gazetteer/dictionary-based. Dictionary created from DrugBank.ca database. Both taggers include grounding/normalisation to DrugBank ids and standard names. Feature set: Word, Word-1, Word+1, Word-1_Word, Word_Word+1, DrugBankPresence, POS DrugBankPresence feature indicates the presence of the drug name in the DrugBank. Using CONLL-Evaluation: processed 32065 tokens with 3656 phrases; found: 3251 phrases; correct: 2786. accuracy: 95.25%; precision: 85.70%; recall: 76.20%; FB1: 80.67 Using GATE Corpus Benchmark: Strict: P: 0.65 R: 0.73 F1: 0.69 Lenient: P: 0.74 R: 0.84 F1: 0.78 The details of how to reproduce evaluation, see README. To use standalone version for tagging download DrugExtractionStandalone.tar.gz from Files. -
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EpochX is an open source genetic programming framework, specifically for analysing the properties of evolutionary automatic programming. It supports 3 popular representations - Strongly-Typed GP, Context-Free Grammar GP and Grammatical Evolution.
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GNAT
GNAT recognizes gene names in text and maps them to NCBI Entrez Gene
GNAT is a BioNLP/text mining tool to recognize and identify gene/protein names in natural language text. It will detect mentions of genes in text, such as PubMed/Medline abstracts, and disambiguate them to remove false positives and map them to the correct entry in the NCBI Entrez Gene database by gene ID. March 2017: We started to upload GNAT output on Medline. See files/results/medline/. -
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HW SOM
SOM - Self-Organizing Maps of Teuvo Kohonen
It's a "Hello World" implementation of SOM (Self-Organizing Map) of Teuvo Kohonen, otherwise called as the Kohonen map or Kohonen artificial neural networks. -
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JCLAL
A Java Class Library for Active Learning
JCLAL is a general purpose framework developed in Java for the active learning research area. JCLAL framework is open source software and it is distributed under the GNU general public license. It is constructed with a high-level software environment, with a strong object oriented design and use of design patterns, which allow to the developers reuse, modify and extend the framework. If you want to refer to JCLAL in a publication, please cite the following JMLR paper. The full citation is: Oscar Reyes, Eduardo Pérez, María del Carmen Rodríguez-Hernández, Habib M. Fardoun, Sebastián Ventura. JCLAL: A Java Framework for Active Learning. Journal of Machine Learning Research, 17(95):1-5, 2016.
