Search Results for "semi-autometic measurement tool"
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Showing 107 open source projects for "semi-autometic measurement tool"
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1
FastQC
A quality control analysis tool for high throughput sequencing data
FastQC is a quality control analysis tool designed to spot potential problems in high throughput sequencing datasets. Its goal is to provide a simple way by which to check the quality of raw sequence data coming from high throughput sequencing pipelines. It does this by running a modular set of analyses on one or more raw sequence files in fastq or bam format. It then produces a report summarizing the results, and highlighting any areas where the library may appear unusual. This should... -
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dev-sidecar
dev-sidecar Git release
The developer sidecar, named service-sidecar from service-mesh, means an auxiliary sidecar tool (hereinafter referred to as ds) for developers to proxy HTTP requests to some domestic acceleration channels through local proxy. Intelligently resolve the best domain name IP address according to network conditions to obtain the best network speed. Solve the problem that some websites and libraries are inaccessible or slow. It is recommended that if you encounter a slow-opening foreign website, you... -
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OpenWPM
A web privacy measurement framework
OpenWPM is a web privacy measurement framework that makes it easy to collect data for privacy studies on a scale of thousands to millions of websites. OpenWPM is built on top of Firefox, with automation provided by Selenium. It includes several hooks for data collection. Check out the instrumentation section below for more details. OpenWPM is tested on Ubuntu 18.04 via TravisCI and is commonly used via the docker container that this repo builds, which is also based on Ubuntu. Although we don't... -
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Nebula libp2p DHT
A libp2p DHT crawler, monitor, and measurement tool
A libp2p DHT crawler and monitor that tracks the liveness of peers. The crawler connects to DHT bootstrap peers and then recursively follows all entries in their k-buckets until all peers have been visited. The crawler supports the IPFS, Filecoin, Polkadot, Kusama, Rococo, Westend networks and more. The crawler can store its results as JSON documents or in a postgres database - the --dry-run flag prevents it from doing either. Nebula will print a summary of the crawl at the end instead. A... -
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CellTypist
A tool for semi-automatic cell type classification, harmonization
CellTypist is an automated tool for cell type classification, harmonization, and integration. Classification, transfer cell type labels from the reference to query dataset. Harmonization, match and harmonize cell types defined by independent datasets. integration, integrate cell and cell types with supervision from harmonization. CellTypist recapitulates cell type structure and biology of independent datasets. Regularised linear models with Stochastic Gradient Descent provide a fast... -
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Synth
The Declarative Data Generator
Synth is an open-source data-as-code tool that provides a simple CLI workflow for generating consistent data in a scalable way. Use Synth to generate correct, anonymized data that looks and quacks like production. Generate test data fixtures for your development, testing, and continuous integration. Generate data that tells the story you want to tell. Specify constraints, relations, and all your semantics. Seed development and environments and CI. Anonymize sensitive production data. Create... -
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Gwyddion
Scanning probe microscopy data visualisation and analysis
A data visualization and processing tool for scanning probe microscopy (SPM, i.e. AFM, STM, MFM, SNOM/NSOM, ...) and profilometry data, useful also for general image and 2D data analysis. -
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GMAT
General Mission Analysis Tool
The General Mission Analysis Tool (GMAT) is an open-source tool for space mission design and navigation. GMAT is developed by a team of NASA, private industry, and public and private contributors. The GMAT development team is pleased to announce the release of GMAT version R2022a. For a complete list of new features, compatibility changes, and bug fixes, see the R2022a Release Notes in the Users Guide. -
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MATO (KaryoType)
MATO: Measurement and Analysis TOol
Current tools for morphology and cytotaxonomy measurements face challenges in providing consistent results and compatibility with statistical analysis. MATO (Measurement and Analysis Tools), an upgraded version of our previous KaryoType software, is introduced to address these shortcomings. MATO improves chromosome measurements and karyotype analysis through the incorporation of size-based Karyotyping and a novel grouping algorithm. This tool accommodates a wide variety of morphometric... -
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QUAST
Quality Assessment Tool for Genome Assemblies
... analysis results in summary tables (in plain text, tab-separated, and LaTeX formats) and colorful plots. The tool also produces web-based reports condensing all information in one easy-to-navigate file. QUAST and its three follow-up papers (MetaQUAST, Icarus, QUAST-LG) papers were published in Bioinformatics; the last paper (WebQUAST) is out in Nucl Acid Research. -
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GeigerLog
Python program for Geiger counters and Environmental Sensors
GeigerLog is a combination of data logger, presenter, and analyzer, and now released as version 1.5.0 ! Based on Python (Version 3), it runs on Linux, Windows, Macs, Raspberry Pi, and other. Supports HiDPI screens. GeigerLog is WiFi enabled for servers and clients; it can be monitored by SmartPhone. Initially developed for Geiger counters, it is now a more universal tool, which equally well handles data like temperature, air-pressure, humidity, CO2. Continues to support GQ... -
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Open Beam Profiler
Profiling and analysis of laser beams with ImageJ
This open-source software enables profiling and analysis of laser beams. It can be used with a variety of cameras supported by ImageJ and Micro-Manager, or images from any other source. It provides all common analysis methods like D4Sigma, knife-edge, as well as fitting of Hermite-Gauss and super-Gauss functions. -
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Kisekae UltraKiss
Kisekae UltraKiss is a full featured integrated development environmen
... FKiSS5 enhanced capabilities. These features enable Kisekae game and application development. UltraKiss includes an integrated palette color editor tool, an image editor tool, an integrated audio and video player, and an archive manager that packages LHA, ZIP, and JAR archive files. It also provides a full featured FKiSS programming language trace and debugging tool. UltraKiss has been designed to provide improved developer support so that it is easy to create new KiSS applications. -
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SAFEDC
semi-analytical finite element dispersion calculator of guided wave
... can be output, and GW in the laminate can be caluclated. 3. Circumenferential and longitudinal GW in Isotropic hollow cylinder. 4. Circumenferential and longitudinal GW in Anisotropic hollow cylinder. 5. GW in General section. users can import STL file to SAFEDC, to calcuate GW in general waveguide. A paper named "Modelling guided waves in acoustoelastic and complex waveguides : From SAFE theory to an open-source code tool" is published for the reference on the SAFE theory. -
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MeaProcess
Measurement and Automation Framework + Tool
MeaProcess is a simple and graphical based Measurement and Automation framework and Tool. Support programming with IEC 6-1131.3 ST. Runtime available for Windows, embedded RT-Linux and other realtime OS. -
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Crossref Author Check
Web app to cross-check publication/authorship against CrossRef
This tool retrieves CrossRef information on article type, authorship, print date, subject area, etc. for publications specified by DOI and/or PubMed IDs (max. 100). The tool also tallies the order of authorship for a specified author. -
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Loudspeaker Design Calculations Toolkit
LDCT is a cross-platform tool for common speaker design calculations.
LDCT is an open source, cross-platform application containing many calculations commonly used in loudspeaker design. -
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Orbit Determination Toolbox (ODTBX)
Advanced mission simulation and analysis tool
The Orbit Determination Toolbox (ODTBX) is developed by the Navigation & Mission Design branch at NASA Goddard Space Flight Center as an advanced mission simulation and analysis tool used for concept exploration, proposal, early design phase, and/or rapid design center environments. ODTBX functions and utilities are combined in a flexible architecture that allows for modular development of navigation algorithms and simulations. The core ODTBX functionality is realized through a set... -
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Kieker
Software Monitoring Framework
Kieker is a framework for continuous monitoring and dynamic analysis of distributed software systems. Being designed for continuous operation, it induces only a low overhead. The TraceAnalysis tool allows to analyze and visualize trace information. -
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freesrs
python library for shock response spectrum (SRS) analysis.
.... an acceleration. freesrs calculates the shock response spectrum (SRS) and is a small library with Python and Fortran files. The Fortran files consist of • SmallwoodFilter.f and • GenShockTimeHistories.f They are linked to Python by using the comfortable f2py tool. Latest version is 2.1.0, including now the ability to perform a full install via setup.py. Library (.pyd) and executable have -
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RSSceSim
RSSceSim - Reputation System Scenario Simulator
RSSceSim is a simple and easy to extend simulation tool for reputation models that can be used for testing, comparing and benchmarking reputation system metrics under specific scenarios. -
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Skippity
Test and measurement automation for electronics, physics and more
GET INVOLVED - see General Discussion Skippity is a versatile script-based automation controller for test and measurement instrumentation. It’s ideal for use on the test bench or for automating experiments in the lab. Skippity doesn't rely on instrument specific vendor drivers so it can communicate with both legacy and current commercial instruments and also with devices you've designed and built yourself. Once you've told Skippity about your instruments and their commands using simple... -
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MoPAC
The Modular Pipeline for the Analysis of CRISPR screens
To facilitate the comparison of gene essentialities in two or more cell samples, we propose MoPAC (Modular Pipeline for Analysis of CRISPR screens), a Shiny-driven interactive tool for differential essentiality analysis in CRISPR/Cas9 screens. For installation and usage instructions please refer to the wiki page. -
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Wind Path Visualization tool (WPV) is a simple model for tracking wind trajectories using measurement data (wind direction, wind speed, gas concentration) at a actual location. It has the following features.
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LaueTools
open source python packages for X-ray MicroLaue Diffraction analysis
LaueTools is an open-source project for white beam Laue x-ray microdiffraction data analysis including tools in image processing, peaks searching & indexing, crystal structure solving (orientation & strain) and data & grain mapping visualisation. Python 3 Code and new features are now at: https://gitlab.esrf.fr/micha/lauetools