Search Results for "ontologies"
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Showing 128 open source projects for "ontologies"
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Common Core Ontologies
The Common Core Ontology Repository
The Common Core Ontologies (CCO) comprise twelve ontologies that are designed to represent and integrate taxonomies of generic classes and relations across all domains of interest. CCO is a mid-level extension of Basic Formal Ontology (BFO), an upper-level ontology framework widely used to structure and integrate ontologies in the biomedical domain (Arp, et al., 2015). BFO aims to represent the most generic categories of entity and the most generic types of relations that hold between them... -
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API Platform Core
The server component of API Platform, hypermedia and GraphQL APIs
API Platform Core is an easy-to-use and powerful system to create hypermedia-driven REST and GraphQL APIs. It is a component of the API Platform framework and it can be integrated with the Symfony framework using the bundle distributed with the library. It natively supports popular open formats including JSON for Linked Data (JSON-LD), Hydra Core Vocabulary, OpenAPI v2 (formerly Swagger) and v3, HAL and Problem Details. Build a working and fully-featured CRUD API in minutes. Leverage the... -
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API Platform
Create REST and GraphQL APIs, scaffold Jamstack webapps
... environment and the deployment mechanism leverage Docker, Kubernetes and Helm. Generate a PHP data model from the RDF vocabularies and ontologies. Let the ORM create the related tables. Enjoy a beautiful administration interface built with React without writing a line of code. Scaffold a Next.js, Nuxt.js, Vuetify, Quasar, React, Vue.js or React Native app, tweak it to fit your needs. -
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Eddy
An editor for the specification of Graphol ontologies
Eddy is a graphical editor for the specification and visualization of Graphol ontologies. Eddy features a design environment specifically thought out for generating Graphol ontologies through ad-hoc functionalities. Drawing features allow designers to comfortably edit ontologies in a central viewport area, while two lateral docking areas contains specifically-tailored widgets for editing, navigating and inspecting open diagrams. Eddy is equipped with design-time syntax validation... -
Save time, money and your sanity. Deluxe Payment Exchange+ (DPX+) is our integrated payments solution that streamlines and automates your accounts payable (AP) disbursements. DPX+ ensures secure payments and offers suppliers alternate ways to receive funds, including mailed checks, ACH, virtual credit cards, debit cards, or eCheck payments. By simply integrating with your existing accounting software like QuickBooks®, you’ll implement efficient payment solutions for AP with ease—without costly development fees or untimely delays.
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Mimosa is a modeling and simulation platform, covering the process from building conceptual models to running the simulations. The specification uses ontologies and an extensible set of formalisms for the dynamics. The simulation kernel is based on DEVS.
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simpleowlapi
A light-weight wrapper for the OWLAPI
simpleOWLAPI is a light-weight wrapper for the OWLAPI that enables faster programmatic development of OWL ontologies with more concise code using the power of the Manchester OWL Syntax and related parsers. The wrapper does not make use of all the features of the more powerful OWLAPI. Rather, it is designed specifically for rapid and concise ontology construction in workflows involving semantic data engineering. It can also be used in contexts such as educational and demonstration settings... -
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TemaTres: controlled vocabulary server
Manage, Publish and Share Ontologies, Taxonomies, Thesauri, Glossaries
Web application for management formal representations of knowledge, thesauri, taxonomies and multilingual vocabularies / Aplicación para la gestión de representaciones formales del conocimiento, tesauros, taxonomías, vocabularios multilingües. For the latest version of code: https://github.com/tematres/TemaTres-Vocabulary-Server -
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obo An umbrella organization for ontologies and structured shared controlled vocabularies for use across all biological and biomedical domains
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Venn is a secure workspace for remote work that isolates and protects work from any personal use on the same computer. Work lives in a secure local enclave that is company controlled, where all data is encrypted and access is managed. Within the enclave – visually indicated by the Blue Border around these applications – business activity is walled off from anything that happens on the personal side. As a result, work and personal uses can now safely coexist on the same computer.
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The presented tool, called ONTOOL, allows for creating UML class diagrams on the basis of the selected OWL domain ontologies, and verifying if the diagrams are compliant with the ontologies. ONTOOL additionally allows for normalizing any syntactically correct and consistent ontology expressed in OWL. ONTOOL has been tested with a number of test cases, and empirically evaluated through conducting an experiment. The tool has been implemented as a proof of concept of the methods proposed...
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OLiA
OWL/DL ontologies for linguistic annotations
MOVED TO https://github.com/acoli-repo/olia. The Ontologies of Linguistic Annotations (OLiA) provide an OWL/DL taxonomy of data categories as a reference for linguistic annotation (OLiA Reference Model), plus OWL/DL models for a large number of annotation schemes (OLiA Annotation Models) and their relationship to reference data categories (OLiA Linking Models). The OLiA Reference Model itself is linked to community-maintained repositories such as GOLD (http://linguistics-ontology.org... -
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UFO-Cytoscape
Ontology-based semantic similarity calculation and visualization
Motivation: Biomedical ontologies have been growing quickly and proven to be useful in many biomedical applications. The use of this data is mainly based on semantic similarity calculation between ontology terms and between annotated biomedical entities. Many semantic similarity measures have been proposed for such calculation. Results: A number of tools have been developed on different platforms for ontology visualization and semantic similarity calculation. However, these tools have... -
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DODDLE-OWL
a Domain Ontology rapiD DeveLopment Environment – OWL extension
DODDLE-OWL is a domain ontology development tool for the Semantic Web. DODDLE-OWL makes reuse of existing ontologies and supports the semi-automatic construction of taxonomic and other relationships in domain ontologies from documents. -
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jCOLIBRI: an object-oriented framework in Java for building Case-Based Reasoning (CBR) systems. Supports Textual-CBR, Knowledge Intensive CBR with Description Logics reasoning through Ontologies, Web interfaces, evaluation of the generated applications,
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Prolog+CG is a Java implementation of Prolog with extensions implementing a subset of the Conceptual Graph (CG) theory of John Sowa. CGs are first-class datatypes on a par with terms. Object oriented extensions are also included.
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Information Extraction from Arabic Text
Java based framework for extraction information from Arabic text
This project presents a model a for extracting information from Arabic text. The project executables include three Java based modules that can be used to implement a rule-based information extraction process from Arabic text. These modules are: 1-A module for annotating a selected Arabic text file using a custom morpho-syntactic Part-of-Speech tagging scheme. 2-A module that can be used along with Protégé for establishing Ontology Web Language (OWL) based ontologies based... -
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FLOG4SWS-v2
Semantic matcher for web services and goals using Flora-2
This project implements a logical inference based matcher for semantic web services specified using a subset of the Flora-2 language in conformance with WSMO. Sample web service and goal specifications are provided. A generator of goals and web service specifications for use in benchmarking the matcher is also available. -
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SW-DLP: Developing ontoLogy by Profiling
a tool for easing the ontologies editing and evolution (Semantic Web)
The DLP tool was ideated and developed by: Dr. Luca Mazzola, MsC. Patrick Kapahnke, and PD Dr. Matthias Klusch at the German Research Center for Artificial Intelligence DFKI GmbH (http://www.dfki.de ) in Saarbrücken, Germany. Copyright: DFKI, 2017, licence GLP see https://www.gnu.org/licenses/gpl-3.0.en.html For bug reports, technical problems and feature requests please contact: Luca Mazzola: luca.mazzola@dfki.de or mazzola.luca@gmail.com Patrick Kapahnke: patrick.kapahnke@dfki.de -
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OWL Machine Learning
Machine learning algorithm using OWL
Feature construction and selection are two key factors in the field of Machine Learning (ML). Usually, these are very time-consuming and complex tasks because the features have to be manually crafted. The features are aggregated, combined or split to create features from raw data. This project makes use of ontologies to automatically generate features for the ML algorithms. The features are generated by combining the concepts and relationships that are already in the knowledge base, expressed... -
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EFO
The Experimental Factor Ontology describing experimental variables
*** Please note this repository is now deprecated as of January 2018. All EFO development and source code has been moved to https://github.com/EBISPOT/efo *** The Experimental Factor Ontology (EFO) available from http://www.ebi.ac.uk/efo is an application focused ontology modeling the experimental factors in ArrayExpress and constructing mappings to multiple existing domain specific ontologies. To submit new terms, features or report bugs please submit a ticket at the following: http... -
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Authors: Shahin Mehdipour Ataee & Zeki Bayram Eastern Mediterranean University Our choreography engine takes as input semantic web service specifications written in the Flora-2 dialect of F-logic. Furthermore, we prove the equivalence of ASMs (evolving algebras) and evolving ontologies in the sense that one can simulate the other, a first in literature. Finally, we present a visual editor which facilitates the design and deployment of our F-logic based web service and goal specifications.
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eddy
An editor for the specification of Graphol ontologies
Eddy is a graphical editor for the specification and visualization of Graphol ontologies. Eddy features a design environment specifically thought out for generating Graphol ontologies through ad-hoc functionalities. Drawing features allow designers to comfortably edit ontologies in a central viewport area, while two lateral docking areas contains specifically-tailored widgets for editing, navigating and inspecting open diagrams. Eddy is equipped with design-time syntax validation... -
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Ontology Evaluation/LD Principles
Evaluate Ontology according to Linked data principles
The ultimate goal of building an ontology is sharing and reuse. To ensure the achievement of these objectives, it must meet the criteria set by Tim Berners-Lee as lined data principles: all ontology elements must be identified with URIs, these URIs must be dereferenceable, the ontology language must be semantically correct and ontologies should be linked together (via common URIs). These principles are based on the underlying web and semantic web technologies, such as URIs, HTTP... -
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Discriminative Language Editor
Discriminative language editor based on ontologies
Text editor in Java that is able to detect discriminative expressions while the user is typing. When the internal ontology-based analyzer detects a potential discriminative expression the user is advised by underscoring the related words in the text. A descriptive message about the issue is also shown to the user when the cursor is placed over the potential discriminative expression.