Search Results for "python scripts" - Page 9
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Showing 483 open source projects for "python scripts"
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DualTranscriptDiscovery
Transcript-discovery approach for gene feature delimitation by RNA-seq
This project contains Python scripts usable for a dual transcript-discovery approach that improves the delimitation of gene features from RNA-seq data in the chicken model. Documentation: http://bio.biologists.org/content/biolopen/suppl/2018/01/17/bio.028498.DC1/BIO028498supp.pdf Citation: Orgeur M., Martens M., Börno S. T., Timmermann B., Duprez D. and Stricker S. (2018). A dual transcript-discovery approach to improve the delimitation of gene features from RNA-seq data in the chicken... -
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Tutorial: https://roderickvella.wordpress.com/2017/01/04/control-a-separate-running-script-from-a-web-server-python-rpi/
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A performance and usability focused Linux distribution based on 64-bit Debian testing. It is the successor to illume OS. To use the live ISO image, login to "root" with the password "antorca".
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instabot
Cool Instagram scripts, bots and API wrapper. Written in Python.
Instagram automation tool: liking, following, uploading and more. -
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IAPP
Scripts and programs (e. g. CaTE) for work in IAPP
Scripts for evaluation and whole programs for measurements from work in "Institut für Angewandte Photophysik (www.iapp.de). The main work was "CaTE - Calcium Test Evaluation" (see Files). -
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Pyo Synth
A GUI to help with pyo synthesizer scripts manipulation.
Pyo Synth is an open source application that makes the manipulation of pyo scripts easier by letting you control it with a midi keyboard. The interface allows you to setup every control on your keyboard and link them to parameters in your script during runtime. It is also possible to save your progress directly in the pyo script. See manual for more explanation on features. -
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libinclude
It is a shell library to import other shell scripts as libraries.
... in python. To ensure the usability of the libraries across different OS and/or software configurations, libinclude provides some features to be utilized in the libraries. One can define dependencies with 3ed party programs, which will be checked while importing and returns a meaningful error message if not met. To adopt the library to different environments, conditional comments provide the possibility to include code blocks depending on defined conditions, or run code on file inclusion. -
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gui2exe
Front End to pack your python scripts into cross platform executables
This is a frontend mainly for cx_freeze support to the other options will be droped in next release so consider them deprecated. This is a continuation of the original project of same name. -
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Avogadro
An intuitive molecular editor and visualization tool
Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science and related areas. It offers a flexible rendering framework and a powerful plugin architecture. -
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HZDR
Scripts and programs (e. g. THz-Shaker) for work in HZDR
Scripts for evaluation and whole programs for measurements from work in Helmholtz-Zentrum Dresden Rossendorf (www.hzdr.de). One main project was the THz-Shaker (incl. THz-LiveCam and THz-Viewer) as complete new measurement framework. See Code (https://sourceforge.net/p/hzdr/code/) for files. A special thing is the wrapped CsAPI for GaGe CompuScope cards (e. g. Octopus) into Python: https://sourceforge.net/p/hzdr/code/HEAD/tree/thzshaker/device/scope/csapi.py An example of usage can... -
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SCons gnuplot tool
SCons tool to cooperate with gnuplot program
SCons is a make replacement providing a range of enhanced features such as automated dependency generation and built in compilation cache support. SCons rule sets are Python scripts so as well as the features it provides itself SCons allows you to use the full power of Python to control compilation. This package is an extension (tool) to SCons, which enables "compilation" of gnuplot scripts in SCons-based projects. The intended audience include (but is not limited to) authors/publishers... -
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jumpy
A scripting plugin for PS3 Media Server / Universal Media Server
Jumpy is a general purpose framework for scripts in python and other languages to plug into PS3 Media Server / Universal Media Server. Included is a set of python scripts to run xbmc addons. -
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Notepad3
Light-weight Scintilla-based text editor with syntax highlighting
Notepad3 is a fast and light-weight Scintilla-based text editor with syntax highlighting. Notepad3 is an excellent replacement for the default Windows text editor. Notepad3 offers many extra features over Notepad. It has a small memory footprint, but is powerful enough to handle most programming jobs. -
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HyperSQL is like a doxygen plus javadoc for SQL, hypermapping SQL views, packages, procedures, and functions to HTML source code listings and showing all code locations where these are used.
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SpliceSim is a collection of Python scripts designed for realistic simulation of RNA-seq reads for in silico differential AS studies. For software support and information on their distribution licenses, please proceed to: https://github.com/mingjiewong/SpliceSim
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AppSec Labs Advanced Packet Editor
Advanced Packet Editor (APE) is an open source packet editor
Advanced Packet Editor (APE) is an open source packet editor for viewing and editing TCP and HTTP communication. APE can attach itself to a process to get intercept communication between a server and a client APE uses filters, both external (using python scripts) and internal for automatically substituting text on the fly or simply injecting/editing request and responses. APE is easy to use and configure! The advanced packet editor is based on the original Packet Editor (http... -
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Smart-Card-Library-pyGlobalPlatform
A free opensource globalplatform library for java card and smartcard.
pyGlobalPlatform is a free open source GlobalPlatform library that can be used to JavaCard and other smartcards. You can use it to write python scripts for card resource management of GlobalPlatform cards. You can use 'pip' to install this smart card library. For more Details, you can visit -
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SNMP v1/v2c/v3 engine and apps written in pure-Python. Project moved to GitHub: https://github.com/etingof/pysnmp
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Python Embed C++
Embed C++ in Python source code, dynamically compile and access data
Moved to http://github.com/ftrias/pyembedc Python module to embed C/C++ code within Python source code and scripts. Automatically compile and dynamically link the code. Transparently allow native access to python data from C code and vice versa. Module provides all the "glue" to dynamically convert data types, arrays and structures. -
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PortOpt
A portfolio-optimizer using Markowitz(1952) mean-variance model
PortOpt [Portfolio Optimizer] is a C++ program (with Python binding) implementing the Markowitz(1952) mean-variance model with agent's linear indifference curves toward risk in order to find the optimal assets portfolio under risk. You have to provide PortOpt (in text files or - if you use the api - using your own code) the variance/covariance matrix of the assets, their average returns and the agent risk preference. It returns the vector of assets' shares that composes the optimal... -
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Explore InSAR data and more
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Django Autocomplete Light
A fresh approach to autocomplete implementations
A fresh approach to autocomplete implementations, specially for Django. Python 2.7, 3.4, Django 2.0+ support (Django 1.11 (LTS), is supported until django-autocomplete-light-3.2.10), Django (multiple) choice support, Django (multiple) model choice support, Django generic foreign key support (through django-querysetsequence), Django generic many to many relation support (through django-generic-m2m and django-gm2m). Multiple widget support: select2.js, easy to add more. Creating choices... -
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Network of Information
Information Centric Networking using the NetInf paradigm.
This project hosts code and information for various packages implementing or using the Network of Information paradigm. The software provides implementations of the NI naming scheme (draft-farrell-decade-ni) and other NetInf features (such as convergence layers, forwarding, caching) in different languages, including C, Clojure, Java, PHP, Python, and Ruby. It also contains additional tools such as patches to curl and wget and shells scripts for web server support. -
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Examples for KLayout
A set of example macros for KLayout (klayout.de)
KLayout is a free open source layout editor. Examples for KLayout (E4K) is a set of scripts that run on KLayout to showcase KLayout's functionality or to teach KLayout scripting in the Ruby language. Try it out! (KLayout also offers Python scripting, though this is not yet part of E4K.) Another similar project is The Red Toolbox (a.k.a. TRT; http://sourceforge.net/p/theredtoolbox). TRT is intended to be a toolbox of useful macros that you would actually use during layout, while E4K... -
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ChIP-RNA-seqPRO
ChIP-RNA-sequencing-processing (ChIP-RNA-seqPRO)
ChIP-RNA-seqPRO: A strategy for identifying regions of epigenetic deregulation associated with aberrant transcript splicing and RNA-editing sites. Runnable python scripts packaged together with customized annotation libraries, demo data input and README guide. 9/26 : v1.1 Updated MAIN_IV to debug error thrown by python pandas no longer supporting 'subset'. This code will no longer be actively maintained/updated here. A cloud-based resource for comparative analysis of epigenetic, sequence...
