Showing 2540 open source projects for "structure"

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  • 1

    virHap

    A Software package for Inferring the haplotype structure of a mixed vi

    PhyVar is an open-source software package for viral quasi-species reconstruction, which makes use of a novel phyloprobabilistic approach to infer the sub clonal composition and evolutionary history of a viral population from NGS data. The program aims to characterize and quantify the composition, the abundance and the evolutionary path of the underlying viral population within a given host by analyzing Next Generation Sequencing data. The program takes as input the collection of reads...
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  • 2
    Provide a simple way of creating models for molecular dynamics simulation. Especially for LAMMPS.
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  • 3

    DicomViewer

    Sofware to read dicom files.

    DicomViewer is a small software that allow user to classify dicom files in a tree structure and display it in a rendering area. It allow also to adjust costrast/brightness.
    Downloads: 0 This Week
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  • 4
    molmol

    molmol

    MOLMOL is a molecular analysis and display program

    MOLMOL was part of a collaboration project between BRUKER/Spectrospin and Prof. Wüthrich at ETH Zürich. MOLMOL is a molecular graphics program for displaying, analyzing, and manipulating the three-dimensional structure of molecules, with special emphasis on biological macromolecules. The program has features that make it particularly useful for the study of protein or DNA structures determined by NMR. See the Wiki Home page for more details about the current MOLMOL Enhancement Project 2013. http://sourceforge.net/p/molmol/wiki/Home/ See the Wiki Beta Testing page for details about the current Beta testing procedure. ...
    Downloads: 7 This Week
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  • 5
    snippetsource

    snippetsource

    Portable source code librarian

    Snippetsource is a simple yet powerful repository to store code snippets or any other text content. SQLite is used as the database backend which makes fast indexed lookups possible.
    Downloads: 0 This Week
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  • 6

    Database to CSV

    "Database to CSV" project stores/loads data between database and CSVs

    "Database to CSV" allows to back-up data from database(Oracle, MySQL, SQL Server) in the form of CSV files. Each table data is stored in a separate CSV file. It also allows to load data from CSV files into the database. Program can be run from UI or from command line. There's one more advanced feature which allows merging of data from CSV file to Database. It is only available from command line. (It will take foreign keys and unique keys into consideration and then try to insert...
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  • 7

    data2bin

    Create structured binary files from XML data.

    Need to create binary files with data for Your program, game etc.? Tired of using hex-editor and editing the file manually with the risk of structure-mismatches? Too lazy to reedit complete file after changing structure members order or size? "data2bin" is a utility that takes: 1. Your structures description (you can use integers of different sizes and endiannesses, null-terminated text strings, fixed-size binary strings, structures, arrays...) 2. Your data in a XML file written down according to defined structure. ... and produces final binary file. ...
    Downloads: 9 This Week
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  • 8
    KochCurve

    KochCurve

    This small library implements a data structure for Koch curves.

    This small library implements the Koch curve, snowflake and anti-snowflake like a Shape to be used like any other Java shape. You can test the library by compiling the test applet in Files.
    Downloads: 0 This Week
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  • 9

    Systems Glycobiology

    Glycosylation Network Analysis Toolbox (GNAT)

    ...The original GNAT package (file GNAT.zip) provides functions for reading, writing, manipulation, visualization and simulation of glycan structures and glycosylation reaction networks (citation [1]). The second version of this software (GNATv2beta.zip) upgrades the original GNAT program with additional features that are geared towards incorporating glycan-structure experimental data into the simulation environment. For information about GNAT installation and usage, please see the GettingStarted.pdf file enclosed in the package. To cite GNAT: [1] Gang Liu, Apurv Puri and Sriram Neelamegham, Glycosylation Network Analysis Toolbox (GNAT): a MATLAB based environment for systems glycobiology, Bioinformatics 2013 29: 404-406
    Downloads: 0 This Week
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  • 10

    Simplicial

    A C++ framework for simplicial meshes of arbitrary dimension

    Simplicial provides a framework to work with simplicial meshes of arbitrary dimension. The data structure is "layered" so that any sort of homogeneous mesh can be represented. A specialized structure allows the representation of meshes with explicit adjacency information between top simplexes. Also, a further specialized structure allows the representation of so-called "liquidus" hypersurfaces that describe the behaviour of multi-component materials.
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  • 11

    cvsba

    OpenCV wrapper for sba library

    ...The main features are: - Based on sba-1.6, one of the most popular and robust bundle adjustment implementation, which is extensively used and tested by the community - sba installation is not needed since it is included in cvsba - New CMake structure which makes the library compilation, installation and linkage easier - Similar interface than Bundle Adjustment implementation on cv::LevMarqSparse::bundleAdjust() - Include examples to test the library on synthetically generated data - GPL licence
    Downloads: 0 This Week
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  • 12
    school Managment portal

    school Managment portal

    A comprehensive School Managment Application

    ...Developed with modern technology with the highest level of ethical standards and robust enough to accommodate the Nigerian, British and American curriculum. Updates and upgrades will be developed in cognizance with the structure of the previous version in line with technological advancements to allow easy implementation.
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  • 13
    SiteDriver

    SiteDriver

    CMS SiteDriver - content manager system

    CMS SiteDriver - Content Management System With SiteDriver possible to create almost any site, from corporate websites to online stores.  
    Downloads: 0 This Week
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  • 14
    Mollino

    Mollino

    Not your usual Architectural Modeler

    ...I think there's place for an open software that doesn't work like the existing. It will be simple in its tools and processes, and will have infinite capabilities. This will be possible by defining a logical structure. As I am an architect, and I know very little about programming, and wouldn't reach even in 10 years the necessary level to be able to write anything useful for this type of software, my part will be to bring ideas and coherence to this project. If you want to know some more : - go to the blog https://sourceforge.net/p/mollino/blog/ - write me a message ;) I speak french, german, english and italian. ...
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  • 15
    Guardian Frontend

    Guardian Frontend

    The Guardian DotCom

    This repository hosts a major part of The Guardian’s web application stack, historically the Play Framework–based code that serves the newspaper’s content at scale. It orchestrates rendering of articles, live blogs, and interactive pieces while integrating advertising, analytics, identity, and paywall-adjacent features. The codebase coordinates with upstream content APIs, image services, and media platforms to compose pages dynamically with caching and edge-friendly layouts. Operationally,...
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  • 16
    LCD TFT 240 320 hx8347a SSD1289 sdcard

    LCD TFT 240 320 hx8347a SSD1289 sdcard

    Lcd TFT 320*240 with touchscreen and SdCard

    Sample code for hx8347-A and SSD1289 for 8bits MCU ( begin with Freescale MCU 9s08aw60 with codewarrior V10.x and now Coldfire V1) , print text , draw line , box , circle, scrolling, get coordinates of touchpanel , read BMP file and FATlite drivers from Freescale revised ( FAT16 ). Tested on 9s08aw60 demoboard : http://www.freescale.com/webapp/sps/site/prod_summary.jsp?code=DEMO9S08AW60E&fr=g New release with Coldfire V1 Flexis MCF51AC256A (32bits) pins to pins compatible with 9s08aw60
    Downloads: 0 This Week
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  • 17

    SmartWAV Windows PC Interface

    SmartWAV Windows PC Interface

    This is the official SmartWAV Windows PC Interface, for use with the USB-UART SX, this interface simulates all the commands in software and hardware of the SmartWAV, its an excellent tool to learn fast the commands structure.
    Downloads: 0 This Week
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  • 18

    Web-based Visual Query Designer

    Web-based Visual Query Designer is a tool for generating SQL queries.

    Web-based Visual Query Designer is a tool for generating SQL queries. Currently, it is designed for MySQL only. Do checkout the demo from the project's website. [Note: Only SELECT queries, without GROUP BY (aggregation), can be designed.]
    Downloads: 0 This Week
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  • 19

    Qudaich

    Performs local sequence alignment for NGS data

    ...These the datasets generally have hundreds of thousand sequences or more, and so, the input database should contain large number of sequences. Qudaich is flexible and its algorithmic structure imposes no restriction on the absolute limit of the acceptable read length, but the current version of qudaich allow read length <2000 bp. Qudaich can be used to align DNA, translated DNA and protein sequences.
    Downloads: 0 This Week
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  • 20
    Private organizer/notepad. Will be web-based and written in php/MySQL. Will have the tree-organized structure of nodes (pieces of info, notes, groups, subgroups). Will allow to publish for everybody access some nodes as a blog view.
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  • 21
    CALYFriend
    CALYFriend is a Cross-platform GUI for CALYPSO (Crystal structure AnaLYsis by Particle Swarm Optimization)
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  • 22

    SauceWalk Proxy Helper

    Enumeration and automation of file discovery for your sec tools.

    SauceWalk is a freeware(.exe)/Open Source(.py) tool for aiding in the enumeration of web application structure. It consists of 2 parts a local executable (walk.exe) and a remote agent. Walk.exe iterates through the local files and folders of your target web application (for example a local copy of Wordpress) and generates requests via your favourite proxy (for example burp suite) against a given target url. The remote agent can be used to identify target files and folders on a live system via a PHP script on the target server(ASP/JSP coming soon). ...
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  • 23

    Export Selected Layers (GIMP plug-in)

    A GIMP plug-in to export selected image layers.

    This plug-in helps in exporting multiple layer selections of a GIMP image into multiple images. The plug-in was created to create many icons from a single GIMP project that contains many layers. You must provide a configuration file to define the layer combinations and image file names. The files provided contain a configuration example. If you are familiar with Python "tuple" literals you will immediately understand how it works.
    Downloads: 0 This Week
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  • 24
    XPlanner+ is a web-based project planning and tracking tool.
    Downloads: 3 This Week
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  • 25

    reco4j-neo4j

    Reco4j is a graph-based recommendation engine, this is the neo4j impl

    Reco4j is an open source project aims at developing a recommendation framework based on graph data sources. We choose graph databases for several reasons. They are NoSQL databases, so "schemaless". This means that it is possible to extend the basic data structure with intermediate information, i.e. similarity value between item and so on. Moreover, since every information is expressed with properties, nodes and relations, the recommendation process can be customized to work on every graph. Reco4j can be used on every graph where "user" and "item" is represented by node and the preferences are modelled as relationship between them. ...
    Downloads: 0 This Week
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