Search Results for "structure" - Page 58
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Showing 2540 open source projects for "structure"
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GenCodeGenerator
C++ class to generate biologically plausible genetic codes
...This class was written specifically to perform statistical test for the paper Makukov & shCherbak (2017), but it might be used for a wider class of studies related to the genetic code. By default, the class "GeneticCode" generates alternative genetic codes, with the reqirement of block structure, and, optionally, with the assumption of stereochemical or biosynthetic models (to impose the assumption of the adaptive model, simply filter the codes using the error_cost() function). See Appendix in Makukov & shCherbak (2017) for the description of the algorithm. The code requires Qt 5. To compile the provided example, run 'qmake' to produce the Makefile, and then run 'make' to compile the executable file. ... -
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VeriSiMPL
Verification via biSimulations of Max-Plus-Linear models
This toolbox is used to generate finite abstractions of autonomous Max-Plus-Linear (MPL) systems over R^n. Abstractions are characterized as finite-state Labeled Transition Systems (LTS). The LTS finite abstractions are shown to either simulate or to bisimulate the original MPL system. LTS models are to be verified against given specifications expressed as formulae in Linear Temporal Logic (LTL) and Computation Tree Logic (CTL). The toolbox intends to leverage the NuSMV model checker. Models... -
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"µOS++" (micro OS plus plus) is an open source, royalty-free, real-time operating system intended for embedded systems built around ARM Cortex M or AVR devices. It is based on a preemptive scheduler written in C++ (more info in the Wiki).
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asyncoro
Python framework for asynchronous, concurrent, distributed programming
...Asynchronous completions implemented in asyncoro are sockets (non-blocking sockets), database cursors, sleep timers and locking primitives. Programs developed with asyncoro have same logic and structure as Python programs with threads, except for a few syntactic changes. asyncoro supports socket I/O notification mechanisms epoll, kqueue, /dev/poll (and poll and select, where necessary), and Windows I/O Completion Ports (IOCP) for high performance and scalability, and SSL for security -
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Ansistrano
Ansible role to deploy scripting applications like PHP, Python, Ruby
...Ansible is a powerful open-source tool for configuring and provisioning servers. Ansistrano leverages all its power to deploy applications. Ansistrano uses a folder structure in your servers that simplify rollbacking: a soft link change, an application reload, and done! We support deploying by pulling your code from CVS (Git, Mercurial, or Subversion), downloading from the repository (S3, or ZIP file), or pushing (Copying or Rsyncing). Ansistrano offers a deployment flow with hooks. Attach any specific tasks before or after every step to tune your workflow (restarting servers, cleaning caches, etc.). ... -
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In silico fragmentation evaluation
Comparative analysis of open source in silico fragmentation tools
We compared the performance of four publicly available in silico fragmentation tools that help in structure elucidation of metabolites (MetFrag, CFM-ID, MAGMa+ and MS-FINDER). Using the output of these tools we developed a voting/consensus model which is combining, re-ordering and re-ranking the candidates file and increases the correct hit percentage. We used 520 compounds from the 2016 CASMI challenge with 312 compounds for training and 208 compounds for validation purposes. -
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ExtremeTalk(XT)是一个用于企业或者组织内部进行在线通讯的，基于XMPP(Jabber)协议的即时通讯系统。ExtremeTalk(XT) is an Instant Messaging(IM) collaboration platform based on XMPP(Jabber) for enterprises and organizations
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Projects-Solutions
Links to others' solutions to Projects
...The README makes clear that the goal is to build a repository of implementations across languages, showing that the same problem can be solved in Python, Java, Go, JavaScript, C++, etc. For learners it is particularly useful to see how others structure their projects, how they implement algorithms in different languages, and how to cleanly organize a solution. -
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SummitDB
In-memory NoSQL database with ACID transactions, Raft consensus, etc.
...SummitDB provides one key space that is a large B-tree. An ordered key space allows for stable paging through keys using the KEYS command. Redis uses an unordered dictionary structure and provides a specialized SCAN command for iterating through keys. -
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Vim-Mode
Next generation vim support for atom
vim‑mode is an Atom editor package providing modal Vim-style editing—combining the power of traditional Vim keybindings with the extensibility of the Atom editor. It’s now deprecated in favor of vim-mode-plus. Provides Vim modal control for Atom, blending the best of Vim and Atom. Seamlessly integrates with Atom's UI and editing workflows. Easy to install via Atom’s package manager. -
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Fondement Michtam
Few useful tools that will be liberally used in all my projects.
This package includes all little macros and utility primitives that my projects use as architectural fundation. This include: Genericity: 1 simple macros for translating a pointer to a field to a pointer to it's structure. 2 simple macros for Object inclusion in C. Memory management: My projects try to manage memory with a strict stack discipline (when possible). There are 2 main stacks, only one of which is widely used. It is also possible to push a stack on a stack, so this is really more a tree than a stack discipline. Fondement Michtam offers primitives to: - Setting 2 main stacks... -
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JWebSwing
A true Java Only Web Framework
The JWebSwing is a web framework designed for ease of use, and as simplistic as possible in design. Design your applications the same way you would design a Swing application! Annotate your CSS according to Java Objects, Fields, or even in-line. Utilizing the best open source available on the web, This framework combines the best components available freely on the web into a single, easy-to-use, and extremely powerful framework which is lightweight, fast, and easily... -
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Open Star
Open Star interactively sums star field images.
This program is in alpha development and is not yet ready for general use. Open Star interactively reads multiple images of a fixed star field from a designated directory structure, sums them, rescales the sum, and displays it. This has the affect of maintaining the objects in fixed positions ( stars ) in the summed image, while averaging away sensor noise and transient objects ( planes, satellites, UFOs, etc ). The program also supports normalizing hot pixels by subtracting out a dark field image. -
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node2vec
Learn continuous vector embeddings for nodes in a graph using biased R
...The algorithm is designed to learn continuous vector representations of nodes in a graph by simulating biased random walks and applying skip-gram models from natural language processing. These embeddings capture community structure as well as structural equivalence, enabling machine learning on graphs for tasks such as classification, clustering, and link prediction. The repository contains reference code accompanying the research paper node2vec: Scalable Feature Learning for Networks (KDD 2016). It allows researchers and practitioners to apply node2vec to various graph datasets and evaluate embedding quality on downstream tasks. ... -
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epi-ACE is a tool for examining the hierarchical data structure of small epidemiological data sets. It provides facilities to scale attributes, import data and draw 3D lattices. Its mathematical foundations are in Formal Concept Analysis.
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ConverterGenerator
Generator for converter code in Java
...The conversion code is generated as long as field names are equal. Thus generated code, however, is not complete. It is necessary to supervise the code and correct it where needed. The Converter Generator generates the "structure" of a converter framework and concrete converter classes. This saves a lot of code writing. Another advantage is that a cascade of converters are created recursively when a field with same name declares different classes in the from and to bean. When developing you cannot know all kind of converters you need. And this is no problem: Just create the new converter later in the same context. ... -
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component-watch
Describe and watch component structure of java programs
"Component-Watch" is a tool discovering, showing and assessing the structure of (big) java programs from their classes. It finds what are the components composing a program, analyse what are the relations between those components and compare those the the permitted relations between components. The tool helps to easily define and display UML-like diagrams showing components and their relationship. -
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Angular Webpack Starter
An Angular starter kit MFE Starter
Angular Webpack Starter is a starter kit or seed repository for building micro-frontends (MFE) or modular web applications, particularly using Angular, Webpack, and TypeScript (though it may support broader JavaScript setups). It aims to give developers a pre-configured project structure with best practices around file organization, build tooling (Webpack), hot module replacement (HMR), testing (Karma, Protractor), TypeScript configuration, linting, and environment setup. The idea is to accelerate the time to bootstrap a rich front-end web app with scalable structure, rather than starting from scratch. Because it is opinionated, it helps enforce architectural consistency in projects, especially when building complex frontend systems or multiple micro-frontends. ... -
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StrategyStateGenerator
Generator for strategy and/or state pattern code in Java
...Thus the ancestor project [Strategy Generator](https://sourceforge.net/projects/strategygenerator/) has been adapted as new project *Strategy/State Generator* to generate also *State Pattern* Java source code. Please, note, that the API of this project and [Strategy Generator](https://sourceforge.net/projects/strategygenerator/) are similar but not identical. The structure is equal. However, the class and field method names -
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react-native-login
An example React Native project for client login authentication
...Because mobile authentication flows often involve more complexity than web—such as secure storage, token renewal, and redirect handling—the example gives a scaffold for real-world usage. While not a full production app, it provides sufficient structure for mobile developers to learn the foundation of login/registration, token handling, and basic navigation after login. The repository is aimed at developers who already know React or React Native and want to see how authentication can be set up cleanly. It complements discussions and blog posts around mobile login flows and best practices in token-based mobile setups. -
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MOGEN
The software for modeling the 3D structure of a genome using Hi-C data
The software builds 3D models of chromosomes or genome given chromosomal contacts data such as Hi-C, TCC, 5C. MOGEN was tested on simulated datasets. Using real Hi-C data of a human cell line, MOGEN built models that are consistent with knowledge about the genome of the cell line. Detail on how to use it: https://github.com/BDM-Lab/MOGEN It is published in Bioinformatics: http://bioinformatics.oxfordjournals.org/content/32/9/1286 Bioinformatics, Data Mining, Machine Learning (BDM)... -
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Buckets
A complete, fully tested and documented data structure library
A complete fully tested and documented data structure library written in pure JavaScript. Buckets also includes several functions for manipulating arrays. A bag is a special kind of set in which members are allowed to appear more than once. Binary search trees keep their elements in sorted order, so that lookup and other operations can use the principle of binary search. Dictionaries map keys to values, each key can map to at most one value. -
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NEdit (Natural Edit)
nEDIT is a Software AG NATURAL editor for Windows
...With nEdit you can undo, copy/cut & paste, tabs to edit a lot of programs (with only one o two 390 connections!) and highlighting of Natural Code. It can compare files and save or compile into the host (390) or in your pc. You have snipplets and a view of modules and structure too. -
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To create an Open Source and Free solution for the analysis of woven fabric stuctures. Included will be the ability to view the weave structure in 2D, 3D and profile as well as print and save the drafts (patterns).
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Empusa has moved to the HotRod project at Source Forge. Full DAO generator for MyBatis. Takes structure of an existing database using JDBC and generates DAOs, mappers, and all Mybatis configuration files.