Search Results for "mapping" - Page 26
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Showing 1800 open source projects for "mapping"
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ThanDxflib is a library, written in Fortran 77, which makes the creation of .dxf drawings easy. The dxf files may be read by any CAD program.
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UMI-Reducer
collapsing technical duplicates via Unique Molecular Identifiers
...Here we report the development of UMI-Reducer, a new computational tool for processing and differentiating PCR duplicates from biological duplicates. UMI-Reducer uses UMIs and the mapping position of the read to identify and collapse reads that are technical duplicates. Remaining true biological reads are further used for a bias-free estimate of mRNA abundance in the original lysate. This strategy is of particular use for libraries made from low amounts of starting material, which typically require additional cycles of PCR. -
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disp2sif
Stress intensity factor (SIF) calculation from crack tip displacements
The code implements Muskhelishvili's complex function approach to calculate 2D stress intensity factors (modes I+II) from crack tip displacement fields. Surface displacements can be used with a plane stress elastic model. The code uses power/Fourier series expansion and a conformal mapping of an ellipse onto a circle. -
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Jsonmodel
Magical Data Modeling Framework for JSON
JSONModel is an Objective-C library that simplifies the parsing and serialization of JSON data into strongly-typed model objects. It automatically maps JSON to Objective-C classes and supports validation, optional properties, and nested models. JSONModel helps streamline networked data handling in iOS and macOS apps. -
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VoltMR
Pure java NGS mapping soft run on Hadoop 2.0
...For DNA mapping, GATK compatible realignment/recalbration followed after mapping. For RNA mapping, splice aware algorithm is implemented. Volt is open source, released as "LGPLv3" -
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Remix OS Player
Remix OS Player is based on Android Marshmallow.
Android has a wide range of games available on the Play Store all of which can be played on Remix OS, such as or including Clash Royale, Pokémon Go, and Vainglory on their PCs. For the more dedicated gamer, Remix OS also includes a key mapping tool that allows Android games with touch control schemes to be played more effectively with keyboard and mouse. Remix OS Player is first available for Windows PCs, with Mac support coming in future. Installation only requires the user to download an .exe file to run Remix OS directly from their desktop. Remix OS Player is the fastest and most optimized Android emulator on the market and is based on Google’s own Android Studio. ... -
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RTKSharp
This is a port of LibRTK on C#, and into a small c/c++ library.
RTKLIB is an open source program package for standard and precise positioning with GNSS (global navigation satellite system). RTKLIB consists of a portable program library and several APs (application programs) utilizing the library. This port includes only a library (.so or .dll) for the C/C++ language and a .dll for C#/.NET Framework. RTKSharp is compatible with Windows and Linux using the .NET/Mono Assembly withoout the need of recompilation/cross-building. -
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...The first is an encryption / decryption string which we will allow to be up to 128 lower case alphabetical characters in length. The second string is a line of text from a file that is to be encrypted or decrypted. the basic strategy for encrypting data is based on mapping alphabetical characters to specific values, then doing some simple mathematical operations to create a new value.
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YYKit
A collection of iOS components
YYKit is a large collection of iOS utility and component modules, intended to provide building blocks for iOS app development. It is released under the MIT license. The repository splits out independent submodules such as YYModel (a high-performance JSON ↔ model mapping layer), YYCache (a fast caching system), YYImage (image handling, including support for formats like WebP, APNG, GIF), YYWebImage (asynchronous image loading and caching), YYText (a rich text display and editing component), YYKeyboardManager (keyboard/input management), YYAsyncLayer, YYDispatchQueuePool, and various handy Categories that extend Foundation/UIKit with utility methods. ... -
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INTEGRATE: Calling gene fusions with exact fusion junctions and genomic breakpoints by combining RNA-Seq and WGS data. To download source code, reference manual and test case, please go to 'Files'. Also refer to 'Wiki' for details.
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A Matlab toolbox for geostatistical modelling, prediction and simulation. It contains native matlab algorithms, and interfaces to SGeMS, GSTAT and VISIM.
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Delphi Pascal dll with entry points returning sunrise and sunset. A conversion of the classic Sky & Telescope BASIC program
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littletable is a lightweight in-memory data manager of collections of Python objects, providing ORM-like access for querying and joining data using object attributes as pseudo-columns.
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Grotag views Amigaguide documents or converts them to HTML and DocBook XML. Additionally it can validate and pretty print such documents.
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5.Kernelized qtl-haplotype mapping (HPC)
Fortran/R program for kernelized qtl-haplotype mapping by mixed model
Kernelized qtl-haplotype mapping (named KHAMMIX) is a Fortran/R program which performs parallel haplotype based scans of chromosomes, by mixed model analyses, for diploid organisms. Two kernels; the Gaussian and Van Raden kernels, are allowed for the mixed model analyses. The haplotypes are defined by a sliding window of L SNP markers (L is an integer greater or equal to 1). -
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PExFInS
Post-GWAS Explorer for Functional Indels and SNPs
The generation of Post-GWAS Explorer for Functional Indels and SNPs (PExFInS) was originated from the observation that high proportion of cis-acting expression quantiative trait loci (cis-eQTLs) emerged in GWAS SNPs and the underexplored status of indel cis-eQTLs for GWAS. We believe that the integration of cis-eQTLs, especially indel cis-eQTLs, with candidate disease-associated variants generated from GWAS could facilitate the identification of causal genes or disease mechanisms. On the... -
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We designed and implemented a pipeline for fast and accurate quantification of both known miRNAs and isomiRs by joint processing multiple samples. QuickMIRSeq reconciles its implementation with the unique nature of miRNAs.All analyses results are organized in a user friendly manner, accessible via a web interface, and can be drilled down interactively by investigators or analysts to conduct further investigation and discovery. QuickMIRSeq is a powerful and flexible open source tool for...
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MapIgniter2
Web Mapping Platform
MapIgniter2 is web mapping platform to publish and manage geographic information powered by Laravel 5, OpenLayers 3 and AngularJS -
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Abc-Map
http://abc-map.fr
Tutorials and help: http://abc-map.fr New version coming soon ! https://github.com/remipassmoilesel/abcmap2 -
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SMT: SAR Management Toolkit
Application for managing land searches for missing persons.
Experimental application for assisting in the management of land searches for missing persons. Incorporates OpenJump for GIS rendering of segments, establishing intitial POA values for segments through consensus or mixed consensus and statistical distances, POS and POA recalculation based on PODs from applied resources, and task assignments suggested by missing person behavior profiles. -
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ThéMA libs
Commons and utils Java classes used in ThéMA projects
This project contains 7 Java libraries developped in ThéMA laboratory : - common - data - parallel - drawshape - graph - network - msca -
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BayeFM-MCMC-v1.0
Fine mapping using Bayesian MCMC
A new fine mapping method for detecting causitive variants (clusters) using Bayesian MCMC for complex traits. It is typically suitable to the GWAS identified region, which typically confines the causitive variant in a small region, say 1Mb or even small region. If there are enough variants are genotyped or imputed with high quality. The software is able to generate a set of credible sets t refine the causitive variants. -
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...The package can contain only the 64(look in CPack.h #define stringsize for change key lenght) byte key lenght, so it not support directories. Support checking versions of package. Cross-platform realization of mmap-ing. For disable memory mapping comment define in CPack.h. For changing comression and hash algo look macros in CPack.c FUTURE CHANGES: Crypting all keys.
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Pop Framework
Use Java bean as model of web page, reference beans in hyperlinks
Pop Framework (or Pop), http://www.popframework.net, is a bean-based MVC framework for Java/J2EE web applications. Pop implements IoC, Dependency Injection, and AOP. Pop provides annotations for users to define and reference a bean. Pop can help users to customize a bean, a scope, a factory and a reference in object-oriented way. Pop treats a bean as the model of a web page (JSP or servlet), the webpage itself is a view of the bean. The model provides the data for the view, the view is... -
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java-object-merger
Library for merging and mapping of java objects
Main goal of this library is to provide lightweight, easy configurable with annotations, and powerful tool for object mapping/merging, making life easier for projects with multilayer structure. It was take for me less then one day to completely migrate project at my main work (hundreds of classes, mappings between DTOs, Business objects and view objects) from dozer to java-object-merger without any serious issues. Go to Wiki pages for technical FAQ with examples!
