Search Results for "parallel" - Page 25
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Showing 924 open source projects for "parallel"
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genericmock
generic bits of useful code
...Everything is provided under BSD license so you don't need to worry about incorporating this into your commercial application. Bits of code: - redirecting standard streams (stdin, stdout, stderr) - getting access to a program's streams - run parallel tasks .... Visit the wiki for details: https://sourceforge.net/p/genericmock/wiki/Home/ -
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FAUST2
Formal Abstractions of Uncountable-STate STochastic processes
...A dtMP model is specified in MATLAB and abstracted as a finite-state Markov chain or Markov decision processes. The abstraction procedure runs in MATLAB and employs parallel computations and fast manipulations based on vector calculus. The abstract model is formally put in relationship with the concrete dtMP via a user-defined maximum threshold on the approximation error introduced by the abstraction procedure. FAUST2 allows exporting the abstract model to well-known probabilistic model checkers, such as PRISM or MRMC. ... -
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TCM's bin2img converter
a powerful tool for sharing non-image files on image hosting sites
...It converts files into the PNG image format and is able to directly upload to an image hosting site. You can split files to circumvent file size limits, with a nice side effect: parallel, faster downloads. Using image hosting sites for sharing files has advantages over conventional One-click hosting services: No download queue and full speed. 1-click downloads are possible by using a special URL protocol: b2i:// The tool creates real, valid PNG files and encodes the files into pixel colors based on the byte values instead of breaking file format specs -
Desktop and Mobile Device Management SoftwareDesktop Central is a unified endpoint management (UEM) solution that helps in managing servers, laptops, desktops, smartphones, and tablets from a central location.
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Route11
C++ flow-based metaprogramming library
Route11 is a powerful C++ flow-based metaprogramming library that allows you to create and route complex dataflow systems at compile-time. Route11 uses Template Metaprogramming to construct complex "process systems" defined by static relationships between "process primitives". A process primitive is a generic host class that inherits a "process policy". The process policy defines the specific behavior of a process primitive. The general term: "process" can refer to either one of these... -
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HECTOR
HECTOR is parallel error corrector for 454 datasets
We present HECTOR, a parallel multistage k-hopo spectrum based homopolymer-length error corrector for 454 sequencing data. -
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MIDI Step Sequencer - Cythar
Polyphonic MIDI sequencer
A pattern-oriented, polyphonic MIDI step-sequencer, which makes its own path. 16 parallel patterns with six tracks and 16 bars – equating to 256 bars & 96 tracks. Videos: https://www.youtube.com/watch?v=0UK7US2NwC0&list=PLZCmwv5U3kDP-3jldIzOErbnBOdGjJV_M Source: https://github.com/monotomy/CYTHAR-Sequenzer Check out B-Step Sequencer too: http://b-step.monoplugs.com . A similar, new Project. -
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Fast Matrix for Java
General purpose matrix utilities for Java in Parallel Computing
Fast Matrix for Java (fm4j) is a general-purpose matrix utility library for computing with dense matrices. fm4j encapsulated different underlying implementations and select the optimal one in run-time depending on the size of the input matrix. Moreover, fm4j employs Java (Tm) Concurrency to take advantage of the computation power of multi-cor processors. -
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The sequence alignment task in MAGI (magi.ucsd.edu) is based on the miRanda algorithm, but we redesign the miRanda algorithm on GPU by taking its advantages of massively parallel computing and extra high memory bandwidth using using NVIDIA’s Compute Unified Device Architecture (CUDA). The CUDA-miRanda implementation is a fast microRNA target identification algorithm that aligns short nucleotide sequences (i.e., < 32 nucleotides) against longer reference sequences (e.g., 20k nucleotides). It has the ability to report multiple alignments and the corresponding traceback sequences for any given query-reference pair with up to 166x speedup on 4 GPUs compared to regular CPUs.
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ALCHEMY is a genotype calling algorithm for Affymetrix and Illumina products which is not based on clustering methods. Features include explicit handling of reduced heterozygosity due to inbreeding and accurate results with small sample sizes
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FASTCUDA
Execution of CUDA programs on a Heterogeneous FPGA-based Architecture
FASTCUDA methodology proposes the use of CUDA, a Graphical Processing Unit (GPU) language which exposes parallelism at source code in a FPGA hardware acceleration environment.The FASTCUDA toolset splits, with minimal user intervention, application's code into two parts: one that will be compiled and executed as parallel software in an embedded Multi-core, and another that will be synthesized and implemented with multiple special-purpose accelerators in hardware. -
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gpgmpi
An GPGMP in C++/OpenCL with improved time step algorithm
The need for speed is always a challenge for large-scale stochastic simulation. This software is based on a parallel stochastic simulation algorithm already implemented on Graphics Processing Unit (GPU) for inhomogeneous reaction-drift-diffusion systems. We suggest an improved choice of time step which turns out to be almost 3 or even more times fast with nearly identical accuracy. The software is now completely implemented in C++ and OpenCL which only depends on boost library and GPU vendor’s OpenCL SDK. ... -
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Parallel HRRT Deconvolution is a multithreaded ImageJ plugin for motion correction of PET brain images.
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GENIE (GEne-geNe IntEraction)
GPU based Parallel Gene-Gene Interaction Analysis
Gene-gene interaction in genetic association studies is computationally intensive when a large number of SNPs are involved. Most of the latest Central Processing Units (CPUs) have multiple cores, whereas Graphics Processing Units (GPUs) also have hundreds of cores and have been recently used to implement faster scientific software. However, currently there are no genetic analysis software packages that allow users to fully utilize the computing power of these multi-core devices for genetic... -
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Parallel Super-Resolution is a multithreaded ImageJ plugin for super-resolution. Super-resolution is an image fusion and reconstruction problem, where an improved resolution image is obtained from several geometrically warped, low resolution images.
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grn_inference_multigpu
This project is a exhaustive search algoritm for multiple GPUs
...Among the search algorithms already proposed, there is the exhaustive search where the best feature subset is returned, although its computational complexity is unfeasible in almost all situations. The objective of this work is the development of a low cost parallel solution based on GPU architectures for exhaustive search with a viable cost-benefit. We use CUDA , a general purpose parallel programming platform that allows the usage of NVIDIA GPUs to solve complex problems in an efficient way. -
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PCramer
Dense linear solver utilizing Cramer's rule in parallel
This code provides a linear solver based on a parallel application of Cramer's rule. The programming was done in 'C' leveraging the MPI-CH2 libraries for message passing between nodes. This implementation is for dense linear systems and all calculations are done with doubles. -
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xphire
Cross-company Parallel Half-Identical Region Engine
XPHIRE (Cross-company Parallel Half-Identical Region Engine) can detect Half-Identical Regions of DNA in CSV-data. -
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NetDSpar, a Cytoscape plugin is developed to efficiently analyze the robustness-related dynamics and feed-forward/feedback loop structures of biological networks. This is an improved plugin of NetDS (http://netds.sourceforge.net/). We employed OpenCL library to make the time-consuming parts of NetDS are processed in parallel. Finally, in comparison to the original NetDS, NetDSpar performed large-scale robustness calculation and feed-forward/feedback loop examination faster by several hundred times for a human signaling network with 1609 nodes and 5063 links.
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The parallelized FDTD Schrodinger Solver implements a parallel algorithm for solving the time-independent 3d Schrodinger equation using the finite difference time domain (FDTD) method. See the Hosted Apps > MediaWiki menu item for more information.
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The Finite Difference Time Domain (FDTD) method is a powerfull numerical technique to solve the Maxwell equations. Here you can find parallel FDTD codes developed by Zsolt Szabó. The codes can be run under UNIX and Windows operating systems.
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Overlap Images
Overlaps two images
This project's purpose is to overlap two images in sequential and parallel mode. At the beginning you upload the first image, then the second image uploaded is resized in order to match the first one. The images are overlapped and the time operation is calculated in order to see the difference between the operations (sequential or parallel). The results are passed to the UI.
