Showing 78 open source projects for "forest"

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  • 1
    AmPEP and AxPEP

    AmPEP and AxPEP

    Sequence-based Antimicrobial Peptide Prediction by Random Forest

    ...However, identification of AMPs through wet-lab experiment is still expensive and time consuming. AmPEP is an accurate computational method for AMP prediction using the random forest algorithm. The prediction model is based on the distribution patterns of amino acid properties along the sequence. Our optimal model, AmPEP with 1:3 data ratio achieved a very high accuracy of 96%, MCC of 0.9, AUC-ROC of 0.99 and Kappa statistic of 0.9. AmPEP outperforms existing methods with respect to accuracy, MCC, and AUC-ROC when tested using the benchmark datasets. ...
    Downloads: 6 This Week
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  • 2
    Synonyms

    Synonyms

    Chinese synonyms, chat robot, intelligent question and answer toolkit

    ..."Synonyms Cilin" was compiled by Mei Jiaju and others in 1983, and now widely used is "Synonyms Cilin Extended Edition" maintained by the Social Computing and Information Retrieval Research Center of Harbin Institute of Technology. Classes and subclasses, sort out the relationship between words, the extended version of the synonym word forest contains more than 70,000 words, of which more than 30,000 words are shared in the form of open data.
    Downloads: 0 This Week
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  • 3
    Stochastic Forest Simulator is a desktop software to simulate scenarios using Portuguese NFI-5 for E. globulus in Aveiro and P pinaster in Bragança. The software is complete under development and everyone could contribute, replicate, and modified code citing this SourceForge repository.
    Downloads: 0 This Week
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  • 4

    miniABS

    miniABS (mini Absolute Breast Cancer Subtyper)

    miniABS (mini Absolute Breast Cancer Subtyper) is an absolute, single-sample subtype classifier for breast cancer using Random Forest model of pairwise gene expression ratios (PGER) among 11 functional genes. With a systematic gene selection and reduction step, we aimed to minimize the size of gene set without losing a functional interpretability of the classifier. We validated the model performance using a large, heterogeneous cohort that consists of multiple public datasets across four different platforms. ...
    Downloads: 0 This Week
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  • 5
    benchm-ml

    benchm-ml

    A benchmark of commonly used open source implementations

    ...It targets large scale settings by varying the number of observations (n) up to millions and the number of features (after expansion) to about a thousand, to stress test different implementations. The benchmarks cover algorithms like logistic regression, random forest, gradient boosting, and deep neural networks, and they compare across toolkits such as scikit-learn, R packages, xgboost, H2O, Spark MLlib, etc. The repository is structured in logical folders, each corresponding to algorithm categories.
    Downloads: 0 This Week
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  • 6
    3DFOREST

    3DFOREST

    tool for manage and process TLS lidar data from forest environment

    Software tool for tree atributes extraction from point cloud data acquired by terrestrial laser scanner in forest enviroment. 3DForest is not only a visualizer af data but brings new and complex data management for foresters and researchers
    Downloads: 2 This Week
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  • 7
    SExI-FS

    SExI-FS

    Spatially Explicit Individual-based Forest Simulator

    A forest gap model. The model uses an object-oriented approach where each tree is represented by an instance of a generic class of tree. The simulated object trees, mimicking real trees, interact through modifying their neighbors' environment. These modifications are mediated through two major resources: space and light. A 3D representation of a one-hectare plot of forest serves as the grounds for the simulation of this competition.
    Downloads: 31 This Week
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  • 8
    apache spark data pipeline osDQ

    apache spark data pipeline osDQ

    osDQ dedicated to create apache spark based data pipeline using JSON

    This is an offshoot project of open source data quality (osDQ) project https://sourceforge.net/projects/dataquality/ This sub project will create apache spark based data pipeline where JSON based metadata (file) will be used to run data processing , data pipeline , data quality and data preparation and data modeling features for big data. This uses java API of apache spark. It can run in local mode also. Get json example at https://github.com/arrahtech/osdq-spark How to...
    Downloads: 0 This Week
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  • 9
    BEAST

    BEAST

    BEAST is a tool dedicated to assess political goals of woody bioenergy

    ...BEAST is a data- and model-driven Decision Support System (DSS) evaluating woody biomass potentials from forests, hedges and trees outside forests as well as short rotation coppice (SRC). The latter one is modelled spatially explicit. This opens the possibility to identify prefered areas for SRC production under different restrictions and goals. Forest wood and wood from outside forests are treated only aggregated.
    Downloads: 1 This Week
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  • 10
    ForestMTIS
    ForestMTIS is a OnCloud computing compiled and editable project and open source code to generated forest simulators. It was developed to forest growth and yield models that are empirical, non-spatial, deterministic, disaggregated, single species even-aged stand models. This project has received funding from the European Union’s Seventh Framework Programme for research, technological development and demonstration under grant agreement no 613762
    Downloads: 0 This Week
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  • 11
    This application allow user to predict dissolution profile of solid dispersion systems based on algorithms like symbolic regression, deep neural networks, random forests or generalized boosted models. Those techniques can be combined to create expert system. Application was created as a part of project K/DSC/004290 subsidy for young researchers from Polish Ministry of Higher Education.
    Downloads: 0 This Week
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  • 12

    Random Bits Forest

    RBF: a Strong Classifier/Regressor for Big Data

    We present a classification and regression algorithm called Random Bits Forest (RBF). RBF integrates neural network (for depth), boosting (for wideness) and random forest (for accuracy). It first generates and selects ~10,000 small three-layer threshold random neural networks as basis by gradient boosting scheme. These binary basis are then feed into a modified random forest algorithm to obtain predictions.
    Downloads: 0 This Week
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  • 13
    TheForest Mods (rebuilt)

    TheForest Mods (rebuilt)

    In case the official files don't get updated, try these ones. B-)

    Since The Forest gets pretty regular updates, previously-released mod files get out of date pretty quickly. Sometimes, their authors don't re-release them using the new modlibrary, and you can't use them anymore. This projects's goal is to just re-compile the existing mods (from their released source code) to make them compatible with the latest version of The Forest.
    Downloads: 0 This Week
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  • 14
    Age of Empires III - The Napoleonic Era

    Age of Empires III - The Napoleonic Era

    Modification for Age of Empires III

    This is the development page of the Napoleonic Era modification for Age of Empires III. The Napoleonic Era core team shares data and hosts all kinds of files here.
    Downloads: 5 This Week
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  • 15
    SNooPer
    A machine learning-based method for somatic variant identification from low-pass next-generation sequencing.
    Downloads: 0 This Week
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  • 16

    rtcread-ds

    A DS port of an RTC reader for GBA carts.

    ...Program allows you to view the RTC data of the cart inserted in slot-2 of the DS, as well as edit the value of the RTC as desired. Original project created by Adam of Furlock's Forest (http://furlocks-forest.net/).
    Downloads: 23 This Week
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  • 17
    forest_chung
    forest chung is a free html5 webgl 3D fps / horse riding hack & slash online exploration / fighting game written in javascript with shaders and vaste random procedural world, trees, grass, rocs, water, monsters, woman riders .
    Downloads: 2 This Week
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  • 18
    Human AI Net

    Human AI Net

    a Human and Artificial Intelligence Network

    ...The plan is a massively multiplayer space where we design, evolve, and play with game objects and do AI research together which controls those game objects along with directly playing the games. The main data format is, from xorlisp which is also in progress, immutable binary forest nodes, so if millions of people build that together nobody can damage or change anyone else's data since its all constant. You dont change variables. You create new data that points at existing constant data, as deep as you need it. I have mindmap lists, definitions, and 2 editable properties working that way with 2 kinds of event listeners that work locally. ...
    Downloads: 0 This Week
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  • 19

    Immutable Sparse Wave Trees (WaveTree)

    Realtime bigdata tool for bit strings up to 2^63 based on AVL forest

    Realtime bigdata tool at the bit level based on immutable AVL forest which can be run in memory or, in future versions, as a merkle forest like a blockchain. Main object is a sparse bit string (Bits) that efficiently scales up to 2^63 bits normally compressed as forest has duplicated substrings. Bits objects support reading bit, byte, short, int, or long (Java primitives) at any bit index in 64 bit range.
    Downloads: 6 This Week
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  • 20

    FP-RF

    A fuzzy pattern – random forest procedure for feature selection

    A method for feature selection and prioritization aiming at generating robust and stable sets of features with high predictive power. This method uses the fuzzy logic for a first unbiased informative feature selection process and a modified version of the Random Forest to prioritize the candidate discriminant features.
    Downloads: 0 This Week
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  • 21
    CheeseMan

    CheeseMan

    A 2D jump 'n run platformer.

    ...In this game you control a friendly orange cheese man, You are in a world where all the food is alive and you have to battle for justice against the evil white cheese man and stop him from making all unhealthy foods slaves. There are multiple worlds including: Forest, Snow, and Mars.
    Downloads: 0 This Week
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  • 22

    ProximityForest

    Efficient Approximate Nearest Neighbors for General Metric Spaces

    A proximity forest is a data structure that allows for efficient computation of approximate nearest neighbors of arbitrary data elements in a metric space. See: O'Hara and Draper, "Are You Using the Right Approximate Nearest Neighbor Algorithm?", WACV 2013 (best student paper award). One application of a ProximityForest is given in the following CVPR publication: Stephen O'Hara and Bruce A.
    Downloads: 0 This Week
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  • 23

    biomasfor

    GIS GRASS extension to assess the exploitability of forest biomass

    A GIS GRASS extension to assess the exploitability of forest biomass residues take in to account different (ground and cable) harvesting techniques.
    Downloads: 0 This Week
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  • 24
    Scyndi's Forest Quest

    Scyndi's Forest Quest

    A challenging puzzle game

    Scyndi's Forest Quest is a fantasy style puzzle game. It's aims for dragging columns or rows in order to get three symbol's in a row. That sounds easy and boring but don't be fooled, as the game will offer more challenge as you make progress.
    Downloads: 1 This Week
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  • 25

    tree-ident

    Arborial mapping

    Map trees, and capture forest health. Identify tree species from photographs (taken on a smartphone, for example) using pattern recognition to match against a database. Tied in with GIS/GPS information to provide ecological/environmental mapping information.
    Downloads: 0 This Week
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