Search Results for "data mapping" - Page 14
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Showing 702 open source projects for "data mapping"
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Test Data Validator
Used to perform test data validations
This tool could be used to perform a wide variety of test data validations. It can compare heterogeneous sources of data on a field by field level basis based on a field mapping excel file and can provide results in an excel file. The file formats supported are csv, flatfiles, delimited files, xml, sap idocs etc -
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MutAid
MutAid: Sanger and NGS based pipeline for mutation screening.
MutAid: Sanger and NGS based integrated pipeline for mutation identification, validation and annotation in molecular diagnosis. MutAid is an integrated pipeline for mutation screening in clinical research. It can analyze Sanger sequencing and NGS data from raw reads to list of annotated mutation list. MutAid can analyze and interpret raw sequencing data produced by Sanger or several NGS sequencing platforms. It performs format conversion, base calling, quality trimming, filtering, read mapping, variant calling, variant annotation and co-analyze Sanger and NGS data under a single platform. ... -
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olego
OLego – short or long RNA-seq read mapping to discover exon junction
...It is implemented in C++ with full support of multiple threading, to allow fast processing of large-scale data. -
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Atlas is a suite of variant analysis tools specializing in the separation of true SNPs and insertions and deletions (indels) from sequencing and mapping errors in Whole Exome Capture Sequecing (WECS) data.
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ncPRO-seq
Non-Coding RNA PROfiling from sRNA-seq
ncPRO-seq is a tool for annotation and profiling of ncRNAs from smallRNA sequencing data. It aims to interrogate and perform detailed analysis on small RNAs derived from annotated non-coding regions in miRBase, piRBase, Rfam and repeatMasker, and regions defined by users. The ncPRO pipeline also has a module to identify regions significantly enriched with short reads that can not be classified as known ncRNA families. ############# Docker version : download and run Dockerfile (go in... -
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nmea4j
NMEA libary for java (protocol of GPS devices)
The aim of this project is to create a full utility suite for NMEA protocols (best known from GPS devices). First goal is a full implemenation of the NMEA 0183 protocol 3.0 (without proprietary extensions). The library provides parsers for NMEA sentences, gpsd-like network daemons and data generators for simulation and testing. This allows advanced sensor handling from cellphones/tablets/laptops with GPS up to vehicles/ships with NMEA sensors on board. -
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Telomerecat: The Telomere Computatioanl Analysis Tool Telomerecat allows you to generate average TL estimates for any high throughput paired end sequencing samples.
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UPDATE March 14, 2018 Repository and tracking officially moved to github. https://github.com/opticks-org/opticks Sourceforge mailing lists are still in use. Opticks is an open source remote sensing application and development framework.
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MOBIDICK (MOdular But IntegrateD applICation frameworK) is dedicated to gather as less as possible Java frameworks in order to complete full needs of large business application and allow regeneration of code, even when java frameworks change.
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Implementation of an OGC Web Map Service, primarily for serving images dynamically generated from NetCDF data files (although other file formats can also be handled). Also an AJAX web mapping interface based on OpenLayers.
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WebGL Heatmap
A high performance WebGL/JS heatmap display library
webgl-heatmap is a browser-side rendering library that uses the GPU via WebGL to draw smooth, continuous heatmaps from large numbers of data points. Instead of relying on CPU-bound canvas operations, it leverages fragment shaders and additive blending to accumulate intensity and colorize results in real time. The API lets you push points or weighted samples into a buffer and then renders a gradient map where hot areas emerge organically from density rather than discrete markers. Because most... -
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POJava is a simple, light-weight Java-based API for data processing and development. It includes an immutable DateTime object capable of parsing free-form dates in multiple languages and formats, and a variety of utilities for data transformation.
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kvwmap is a complex WebGIS-Client and -Server solution for eGovernment-purposes written in PHP using UMN-Mapserver-technologies, MySQL- and PostgreSQL/PostGIS-databases, SVG, etc. ATTENTION!!! This Project is no longer updated on SourceForge. Please use https://github.com/srahn/kvwmap instead.
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GeoKettle is a powerful, metadata-driven spatial ETL (Extract, Transform and Load) tool dedicated to the integration of different data sources for building and updating geospatial databases, data warehouses and services.
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QMapControl is a Qt widget which enables your applications to use map data from different sources on desktop or mobiles. Maps can be enriched by custom objects which will be drawn into the map.
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CPS Wildfire Management Tool
A wildfire decision support system and visualization tool from Emxsys.
The Wildfire Management Tool (WMT) predicts the potential fire behavior of a wildland fire. WMT incorporates a 3D terrain viewer, the tenets of the Campbell Prediction System (CPS) and the Rothermel fire spread equations to depict fire behavior. WMT is used to adjust tactics & strategies to ensure the safety of firefighters and the effective use of firefighting resources. Requires Java 8 (included) - http://www.java.com/download -
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DBvolution
Java library to remove Object/Relation Impedance
Now stored at https://github.com/gregorydgraham/DBvolution Available from Maven Central: nz.co.gregs.dbvolution Makes relational data easy and fast to use with semantic annotations and encapsulated datatypes. Simple declaration of a DB table: @DBTableName("mytable") public class MyTable extends DBRow { @DBColumn("numeric_code") @DBForeignKey(Code.class) private DBNumber numericCode = new DBNumber(); @DBColumn("uid_mytable") @DBPrimaryKey @DBAutoIncrement private... -
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Simple 8-bit Assembler Simulator
Simple 8-bit Assembler Simulator with Angular.js
...The simulator is written in JavaScript with Angular and runs on every device with a web browser. It has a lot of simplifications and constraints, but it is the basic structure of every emulator. The console output uses memory mapping and maps a specific portion of the memory to the console. Thus writing to the console output is as simple as writing into a specific memory location. The CPU reads instructions from the memory and executes them. The memory contains our program code and can be used by the program to store data. -
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PIHMgis is a “tightly-coupled” GIS interface to Penn State Integrated Hydrologic Model (PIHM). It is open source, platform independent and extensible. The “tightly-coupled” integrated GIS interface to PIHM has been created in the Open Source QGIS
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Super CSV
A fast, programmer-friendly, free CSV library for Java
...This SourceForge page will remain, but with limited functionality (please go to GitHub to report issues and for project downloads). It is highly configurable, and supports reading and writing with POJOs, Maps and Lists. It also has support for deep-mapping and index-based mapping with POJOs, using the powerful Dozer extension. Its flexible 'Cell Processor' API automates data type conversions (parsing and formatting Dates, Integers, Booleans etc) and enforces constraints (mandatory columns, matching against regular expressions etc) - and it's easy to write your own if required. ... -
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VANTED - Visualization and Analysis of NeTworks containing Experimental Data At SourceForge the VANTED development history is preserved, only limited amount of development will proceed here. Please head on to the most recent developments, which can be observed at www.vanted.org.
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koru
a Java ORM framework focusing on simple and rapid development
...It has many excellent features: 1.small and rapid. 2.easy to learn. 3.minimum configuration.but if necessary,you can configure it flexibly too. 4.including easy file uploading and rapid paged query basing on database dialect. 5.easy to put the web form data to database. 6.supporting all kinds of cascaded query. 7.supporting cached query basing on ehcache. -
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ThinkJava
a Java ORM framework focusing on simple and rapid development
Now the project is renamed to 'Koru' and the files has been moved to koru project. To get the latest files please visit: https://sourceforge.net/projects/koru/ -
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StatPlanet Data Editor
Automate merging / importing of country data from different sources
The aim of this project is to automate and simplify the linking / merging / importing of country data from various sources, such as UNESCO, WHO, World Bank, IMF, etc. Project website: www.statsilk.com -
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HomSI
Homozygous Stretch Identifier from next-generation sequencing data
...In this respect, we have developed a novel tool that identifies homozygous regions using deep sequence data. Using *.vcf files as an input file, our program identifies the majo
