Search Results for "data modeling" - Page 13
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Showing 471 open source projects for "data modeling"
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Ship Agents FasterGemini Enterprise Agent Platform lets you rapidly build, scale, govern and optimize production-ready agents grounded in your organization's data. The platform enables developers to build custom or pre-built agents for virtually any use case. New customers get $300 in free credits.
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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RStan
RStan, the R interface to Stan
RStan is the R interface to Stan, a C++ library for statistical modeling and high-performance statistical computation. It lets users specify models in the Stan modeling language (for Bayesian inference), compile them, and perform inference from R. Key inference approaches include full Bayesian inference via Hamiltonian Monte Carlo (specifically the No-U-Turn Sampler, NUTS), approximate Bayesian inference via variational methods, and optimization (penalized likelihood). RStan integrates with... -
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Phanto_maJ
build three dimensional structure
PhantomaJ is a software which aims to help users designing complexe three dimensional structures and building phantom banks. This software, implemented as an ImageJ plug-in, has been designed to be intuitive. PhantomaJ is thus "ready to use" for most users, but advanced users can choose to modify specific parameters such as intersection mode, intensity decrease function or virtual real three dimension. In addition, adding a new "basic form" consiste for advanced users to write two short... -
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SSLTool is a Matlab based toolbox for bioelectromagnetic data (EEG/MEG) visualization, surface Laplacian calculation and modeling. It can compute surface Laplacian on realistic head surfaces given by a triangular mesh. It has a friendly GUI.
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optPBN
An optimization toolbox for probabilistic Boolean networks
We introduce optPBN, a Matlab-based toolbox for the optimization of probabilistic Boolean networks (PBN) which operates under the framework of the BN/PBN toolbox from Shmulevich et al. optPBN offers an easy generation of probabilistic Boolean networks from Boolean rule-based modeling and allows for flexible measurement data integration from multiple experiments and a subsequent integrated optimization problem generation which then can be solved with different optimizers. Thereby optPBN allows for the identification of Boolean functions in the model from a given set of candidate Boolean rules which can be applied for network inference study. ... -
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eSBMTools
python tools for enhanced native structure-based modeling
eSBMTools: python tools that assist the setup and evaluation of native structure-based simulations of proteins and nucleic acids, both at the Cα and all-atom level. The tools interface with GROMACS and support its standard output formats. Information from other sources like bioinformatics or experimental data can be added to the standard native structure-based model (SBM). Publication to be cited: Benjamin Lutz, Claude Sinner, Geertje Heuermann, Abhinav Verma, and Alexander Schug. eSBMTools 1.0: enhanced native structure-based modeling tools. Bioinformatics 29(21):2795-6, November 2013 -
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WOLFGANG
Editor for Petri nets
Wolfgang is a lightweight tool that allows users to easily create and edit Petri nets and check them against general and workflow specific net properties. Specifically, Wolfgang supports full PNML conform editing functionality of Place-Transition Nets (P/T-Nets) and Colored Petri Nets (CPN) as they are defined in the SEPIA package. Its simple and easy to use interface allows to quickly create Petri nets from scratch, edit them graphically in many ways, store and even export them as PDFs. Use... -
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SEPIA: Security-oriented PN Framework
Petri net framework for security related modeling and reasoning.
SEPIA provides implementations for various types of Petri nets. Along Place/Transition-nets, it supports Petri nets with distinguishable token colors and defines coloured workflow nets, where coloured tokens are interpreted as data elements used during process execution. To support information flow analysis of processes, SEPIA defines so-called IF-Nets, tailored for security-oriented workflow modeling which enable users to assign security-levels (HIGH, LOW) to transitions, data elements and persons/agents participating in the process execution. SEPIA builds upon TOVAL (http://sourceforge.net/p/toval), JAGAL (http://sourceforge.net/p/jagal) and SEWOL (https://sourceforge.net/projects/jawl/). ... -
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chdh - egregore source
Source code adaptation of the egregore performance by chdh
This is an adaptation of the software used by chdh for the performance egregore in 2011-2013. It is based on five different audiovisual instruments made of chaotic and physical modeling algorithms that you can directly control. They have been remotely controlled live by chdh the 27th may 2015. You can play, adapt, and use this audiovisual instrument for yourself. It is based on physical modeling and chaotic algorithms entirely build in the Pure Data software. -
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Photovoltaic Cell Estimator LITE
Determining the power output of a PV array is not a precise exercise
The power produced by a PV array depends on characteristics of the PV modules used and the instantaneous climatologically conditions. For most field testing, the measurable quantities are irradiance and temperature. Power is an instantaneous value; the PV array produces so many Watts (or kilowatts) of power at a specific time depending on existing conditions. Power output will change continuously throughout the day. Energy includes a time factor and is measured in Watt-hours or... -
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That project aims at providing a clean API, and the corresponding C++ implementation, for choosing one item among a set of travel solutions, given demand-related characteristics (e.g., Willingness-To-Pay, preferred airline, preferred cabin, etc.).
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VisualPerspective
A diagram/modeling tool.
VisualPerspective is a modeling and diagram creation tool. It enables to create free diagrams but also semantic oriented ones (for instance UML diagrams), in order to run automatic processing (transformations, exports, parsing). There is currently no installer, so you should follow this procedure : http://enzweiler.info/visualperspective/002-installation.html You are very welcome to report any issue with VP. -
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Framework for developing web-based applications (CMS, portals, ERPs etc.) It includes multilanguage support, permits management, MVC mini framework, package structure, template engine, javascript library, simple GUI library, caching system, captcha.
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SEM_bestShortestPath
A SEM-based method for disease module detection
SEM_bestShortestPath is a Structural Equation Modeling (SEM)-based methodology to evaluate the most important shortest paths between differentially expressed genes in biological interaction networks, with absolutely no need of user-defined parameters or heuristic rules, enabling a free-of-bias discovery and overcoming common issues affecting recent network-based algorithms. SEM-bsp is based on Structural Equation Modeling techniques to detect significantly perturbed sub-networks (disease modules) from microarray data, relevant for the disease phenotype under investigation. -
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PerformNet
Queue network modelization tool
Ceci est le projet réalisé à la session d’hiver 2014 par l’équipe Expresso. L’équipe était composée de : Philippe Olivier, François Lemonnier-Lalonde, Dominique Tremblay et François Moreau. Le projet a été réalisé pour le cours de Génie logiciel orienté objet, donné par M. Jonathan Gaudreault à l'Université Laval. Le projet consistait à développer un logiciel de modélisation de réseau de files d’attente, aussi appelé un réseau de Jackson. Chaque nœud du réspeau représente une station... -
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mARC is a novel data modeling technology rooted in the second quantization formulation of quantum mechanics. It is an all-purpose incremental and unsupervised data storage and retrieval system which can be applied to all types of signal or data, structured or unstructured, textual or not. mARC can be applied to a wide range of information clas-sification and retrieval problems like e-Discovery or contextual navigation.
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A reverse engineering, metamodel driven tool that scans PHP files and directories, and delivers an UML/XMI representation of the classes / packages found. The XMI code that it generates can be imported into any UML modeling tool. It is available on PEAR.
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AP3/3SUM
Multimedia asset management and manipulator for Étoilé
3SUM aims to provide a powerful 2 to 3D programmable environment that allow editing several kind of contents and linking the relationships among Objective-C type. 3SUM sits on the top of AP3 framework which consit of 3D screen graph Objective-C API, C++ geometry math classes, basic mesh implementations, raster compositor and thread managements. AP3 also have a few foundation classes for data manipulation purpose, such as AAObject root which allows tagging object with selector-keyed... -
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SCOREMATH
Excel function for multi-criteria selection problems
SCOREMATH implements the simple-yet-ingenious weighted linear model for multi-criteria selection problems described in Ng, Wan Lung. "An efficient and simple model for multiple criteria supplier selection problem." European Journal of Operational Research 186, no. 3 (2008): 1059-1067. "There are many real situations where the decision makers are able to tell the criteria importance ranking (although they cannot tell the exact values of weights). The decision makers may not have enough... -
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AeroDataBase
Aircraft aerodynamic database
A collection of aerodynamic data in HDF format. The data is used in the semiempirical models of aircraft aerodynamic coefficients. Reference: Aircraft Dynamics: From Modeling to Simulation Marcello R. Napolitano, Wiley, 2012. http://eu.wiley.com/WileyCDA/WileyTitle/productCd-EHEP002021.html -
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VoNDA
Visualization of Network DAta
This tools allows for visualization of heterogeneous data sets on SVG network maps -
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BiomeNet
BAYESIAN INFERENCE OF METABOLIC DIVERGENCE AMONG MICROBIAL COMMUNITIES
...The basic idea is that the mixture components of the model (metabolic reactions, subnetworks, and networks) are shared across all groups (microbiome samples), but the mixture proportions vary from group to group. Through this framework, the model can capture nested structures within the data. BiomeNet is unique in modeling each metagenome sample as a mixture of complex metabolic systems (metabosystems). -
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PMM-Lab Lite
Toolkit for Predictive Microbial Modeling
To install PMM-Lab Lite on Linux or Mac OS X follow the instructions at https://sourceforge.net/p/pmmlablite/wiki/Installation/. The Mac OS X version relies on an existing, 64 bit version of Java 6. Some of the things you can do with PMM-Lab Lite: • Import Data from XLS, etc. • Fitting primary / secondary models to data (two-step-fit) • Fitting global models to data (one-step-fit) • Using your own formulas (Formula Editor) • Do predictions with your models • Export results to... -
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budden2014predictive
Scripts and supplementary data for budden2014predictive manuscript
Scripts and supplementary data for the manuscript "Predictive modeling of gene expression from transcriptional regulatory elements" -
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Deem
Analyze time-course data with significance tests, clustering, modeling
Use statistical methods to analyze time-course data (gene expression microarray and RNA-seq data in particular, but not limited to). Apply significance tests to filter out only significant genes or time series. Cluster time series into similar groups. Generate network models, including linear or non-linear models. Variable selection and optimization routines included. Written in Scala and R. The application is a cross-platform desktop app with a simple GUI and is fully functional... -
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3D surface reconstruction has been proposed as a technique by which an object in the real world can be reconstructed from a set of only 2D digital images. This rubric is very useful in many applications including robot navigation, terrain modeling, remote surgery, shape analysis, computer interaction, scientific visualization, movie making, and computer aided design. In this work, we studied photometric stereo approach as a single view 3D reconstruction technique, performed experimental validations on synthetic data. Matlab implementation is available. My co-worker was Mrs. ...
