Showing 2 open source projects for "vmd plugin"

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    vmdStore

    vmdStore

    vmdStore provides a user-friendly interface to free install VMD plugin

    vmdStore provides a user-friendly interface to free install VMD plugins. vmdStore also helps you keeping the plugins always updated. Minimum Requirements Operating System: macOS, Linux, or Windows Visual Molecular Dynamics (VMD) 1.9.3 or later
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    Downloads: 39 This Week
    Last Update:
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  • 2

    Truncate Trajectory (VMD plugin)

    reduces the size of MD trajectories

    Large trajectories have a lot of redundant hetero compounds which augment their size and render calculations cumbersome. Truncate Trajectory is designed to help you discard these compounds. It currently works only with parallelepiped unit cells and periodic boundary conditions, as it is able to detect periodic contacts with hetero compounds from the 26 nearest cells, and incorporates these compounds to the final trajectory. The dimensions and angles (a, b, c, alpha, beta, and gamma) should...
    Downloads: 0 This Week
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