Search Results for "python software" - Page 97
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Showing 5343 open source projects for "python software"
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QSdpR
Viral Quasispecies Reconstruction software based on QSdpR algorithm
This is a viral quasispecies reconstruction software for quasispecies assembly problem on mRNA viruses, which is based on a correlation clustering approach and uses semidefinite optimization framework. The software accepts a reference genome, a NGS read set aligned to this reference and set of SNP locations in the form of a vcf file and outputs an optimal set of reconstructed species genomes which describes the underlying viral population. -
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Ansistrano
Ansible role to deploy scripting applications like PHP, Python, Ruby
Ansistrano is an Ansible Galaxy role to easily deploy and roll back your scripting applications written in PHP, Python, NodeJS, or Ruby. Ansible is a powerful open-source tool for configuring and provisioning servers. Ansistrano leverages all its power to deploy applications. Ansistrano uses a folder structure in your servers that simplify rollbacking: a soft link change, an application reload, and done! We support deploying by pulling your code from CVS (Git, Mercurial, or Subversion),... -
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Boilr
boilerplate template manager that generates files or directories
Boilr is here to help you create projects from boilerplate templates. Are you doing the same steps over and over again every time you start a new programming project? Boilr is a boilerplate template manager that generates files or directories from template repositories. No dependencies (NodeJS, Python Interpreter etc.) Boilr is a single statically linked binary. Grab the one that fits your architecture, and you're all set to save time by using templates! Full Power of Golang Templates.... -
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ipytracer
Algorithm Visualizer for IPython/Jupyter Notebook
Algorithm Visualizer for IPython/Jupyter Notebook. If you use the display(TracerObject) code from where you want to see, you can use it without any special modification. -
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X-SOCS
X-ray Strain Orientation Calculation Software
The X-ray Strain Orientation Calculation Software (X-SOCS) is a user-friendly software, developed for automatic analysisof 5D sets of data recorded during continuous mapping measurements. X-SOCS aims at retrieving strain and tilt maps of nanostructures, films, surfaces or even embedded structures. For more information: http://scripts.iucr.org/cgi-bin/paper?S1600576714004506 To download the latest version of XSOCS (D. Naudet, T. Vincent, M.I. Richard, G. Chahine), follow the... -
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VXE (Virtual eXecuting Environment) is an Intrusion Prevention System (IPS). It protects Linux servers from hacker attacks from network, etc. It protects software subsystems, such as: SMTP, HTTP and any other subsystem, already installed at the server.
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Strider
Open Source Continuous Integration & Deployment Server
Strider is an Open Source Continuous Deployment / Continuous Integration platform written in Node.js and Ember.js, with MongoDB as a backing store. Strider is designed to be easy to set up and use, with reasonable defaults and automation and minimal extraneous UI. It is also extremely customizable through plugins, which allows it to add hooks for performing arbitrary actions during build, modify the database schema, create or modify user interfaces, and so much more! Strider comes with a... -
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Matplotlib is a python library for making publication quality plots using a syntax familiar to MATLAB users. Matplotlib uses numpy for numerics. Output formats include PDF, Postscript, SVG, and PNG, as well as screen display. As of matplotlib version 1.5, we are no longer making file releases available on SourceForge. Please visit http://matplotlib.org/users/installing.html for help obtaining matplotlib.
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joe
A .gitignore magician in your command line
A .gitignore magician in your command line. Joe generates .gitignore files from the command line for you. After install, make sure to run joe u. This will download all .gitignore files in ~/joe-data/ folder. Download the latest binary from the Releases page. It's the easiest way to get started with joe. Make sure to add the location of the binary to your $PATH. You can also use joe to append to a global .gitignore. These can be helpful when you want to ignore files generated by an IDE, OS,... -
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Projects-Solutions
Links to others' solutions to Projects
Projects-Solutions is a companion repository to Projects; while Projects contains the list of project ideas, Projects-Solutions links to solutions submitted by other users in multiple programming languages. It is effectively a community-driven gallery of implementations of the tasks defined in the “Projects” list, allowing learners to compare their solutions, study others’ code, and improve their approach. The repository aggregates links and resources rather than necessarily hosting all code... -
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Illustrated Algorithms
Interactive algorithm visualizations
Inspired by Grokking Algorithms and python-execution-trace, this project aims to reveal the mechanics behind algorithms via interactive visualizations of their execution. Visual representations of variables and operations augment the control flow, alongside actual source code. You can fast forward and rewind the execution to closely observe how an algorithm works. The same code that is displayed next to the illustration is also decorated using babel-plugin-trace-execution and executed to... -
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StochKit is an extensible stochastic simulation framework developed in C++ that aims to make stochastic simulation accessible to practicing biologists and chemists, while remaining open to extension via new stochastic and multiscale algorithms. StochKit is part of the StochSS project [http://www.stochss.org/], and we are relying on continued funding for sustained development. Please consider registering to show your support. Register here:...
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To create an Open Source and Free solution for the analysis of woven fabric stuctures. Included will be the ability to view the weave structure in 2D, 3D and profile as well as print and save the drafts (patterns).
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cleversheep
Test framework and support library
A testing framework. This framework is an Xunit style framework, but its origins lie in system level testing. Also includes an amount of supporting code and miscellaneous library code. -
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Rodeo
A data science IDE for Python
A data science IDE for Python. RODEO, that is an open-source python IDE and has been brought up by the folks at yhat, is a development environment that is lightweight, intuitive and yet customizable to its very core and also contains all the features mentioned above that were searched for so long. It is just like your very own personal home base for exploration and interpretation of data that aims at Data Scientists and answers the main question, "Is there anything like RStudio for Python?"... -
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node2vec
Learn continuous vector embeddings for nodes in a graph using biased R
The node2vec project provides an implementation of the node2vec algorithm, a scalable feature learning method for networks. The algorithm is designed to learn continuous vector representations of nodes in a graph by simulating biased random walks and applying skip-gram models from natural language processing. These embeddings capture community structure as well as structural equivalence, enabling machine learning on graphs for tasks such as classification, clustering, and link prediction.... -
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mediaTUM is free software written in Python for archiving and retrieval of images, documents and other research data. It was originally developed in the framework of the DFG project IntegraTUM and is continuously expanded with new functionalities as required.
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Algorithms in Python
Data Structures and Algorithms in Python
Algorithms in Python is a collection of algorithm and data structure implementations (primarily in Python) meant to serve as both learning material and reference code for engineers. It includes code for graph algorithms, heap data structures, stacks, queues, and more — each implemented cleanly so learners can trace logic and adapt for their problems. The repository is particularly useful for people preparing for competitive programming, job interviews, or building a foundational... -
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katana is the new hacking framework written in python for making penetration testing.
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IOA AM code
Implementation of the core routine for AM analysis from the IOA AMWG
The UK Institute of Acoustics (IOA) amplitude modulation working group (AMWG) has developed a method for analysing and rating AM. This has been produced as an example of an implementation of the routine described in the IOA AMWG report. It is written in the Python language which is freely available. V1.5 is compiled for Windows (XP onwards). The responsibility for the correct implementation and application of the software or any modification thereof rests with the end user. It should not be taken as agreement from the IOA or the AMWG that any results produced by this code are recommended or agreed. ... -
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Open Automation
Building automation (like KNX or OpenHAB) software (like CometVisu).
This project aims to provide software usefull in automation tasks like building automation. Different backends are supported like KNX or OpenHAB. Note: The project has moved to GitHub. Please consult: https://github.com/CometVisu/CometVisu - for the CometVisu https://github.com/OpenAutomationProject - for the different OpenAutomation subprojects -
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Neoformat
A (Neo)vim plugin for formatting code
Neoformat uses a variety of formatters for many filetypes. Currently, Neoformat will run a formatter using the current buffer data, and on success, it will update the current buffer with the formatted text. On a formatter failure, Neoformat will try the next formatter defined for the filetype. By using getbufline() to read from the current buffer instead of file, Neoformat is able to format your buffer without you having to :w your file first. Also, by using setline(), marks, jumps, etc. are... -
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epyunit
PyUnit and PyDev extensions for arbitrary Executables
The package 'epyunit' provides extensions for PyUnit and PyDev. * Extensions for PyUnit - Unittests for arbitrary executables. * Extensions for PyDev - Automation of search and load of pydevd.py The extensions are applicable from commandline and/or within Eclipse. Online manuals: - https://pythonhosted.org/epyunit/ PyPi repository: - https://pypi.python.org/pypi/epyunit Current application examples are: - bash-core - http://bash-core.sourceforge.net Nickname -... -
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synergy-stable-builds
Share one mouse, one keyboard and one clipboard between your computers
Synergy combines your desktop devices together in to one cohesive experience. It's software for sharing your mouse and keyboard between multiple computers on your desk. It works on Windows, Mac OS X and Linux.
