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BioGraphNet is a 'sandbox' within BioMOBY, comprising a common standard and collection of services for sharing distributed protein-interaction network information. We now serve several network data types, and encourage others to participate.
musicomp is a program which most important element is an evolutionary algorithm which uses data mining methods as a fitness function to generate monophone melodies.
PHLIP is a MATLAB centric academic software application for quantification of biofilm structure from confocal laser scanning microscopy (CLSM) data, intended for automated processing and statistical analysis of large data sets produced by CLSM.
A GTK+/Gnome2 graphical front end for the IW3HEV Vector Network Analyzer, also has a signal generator, and It displays graphicaly SWR, Phase, Return Loss, X impedance, Serial resistance, |Z| Impedanze, and Inductance, and capacitance.
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WikiVis is a tool to analyze Wikipedia based on several aspects. The main objective is to visualize the conclusions of this examination, which focusses on the editing frequency and relevance of articles and categories as well as the activity of users.
FormatCheck screens flat files looking for violations in the format of the data. It uses a set of XML files that define the rules for each file format. The Swing front-end allows the user to run the verification, view and print the errors.
The CHIP Cluster Generator attempts to create spatio-temporal cluster data in an automated fashion to help evaluate epidemic detection software. The spatio-temporal data will then be used to determine robustness of spatial detection algorithms.
Project MOVED to Codehaus New location is http://esper.codehaus.org The Esper project aims to provide a general-purpose event processing facility in Java for complex event processing of real-time, high throughput data streams.
A programming language designed for searching and manipulating tree-structured data, particularly corpora of natural languages encoded in an s-expression-like format.
Spam Scalpel is an open source spam intelligence engine. Spam Scalpel's main objective is to automate data collection and analysis for monitoring compliance with anti-spam laws.
Space Time Analysis of Regional Systems: Combines a suite of geocomputational and dynamic visualization modules for the exploratory analysis of data measured for spatial and temporal units.
A log archival and analysis tool for XMail email servers. The tool will also analyze the logged data and email administrative reports. Written in PHP, the tool can be run on many platforms. For XMail itself, please see www.xmailserver.org.
An investigation into an audio compression technique which identifies repeating sequences in audio and uses this information to compress the audio data.
clusterviz allows to cluster three-dimensional data. The clustering process is visualized using OpenGL. As clustering algorithms the family of k-means algorithms is implemented, including mixture models.
Microarray DataAnalysis System, a Java application, provides an intuitive graphical scripting interface to design analysis protocols and perform normalization and filtering to microarray data by a variety of implemented statistical analysis modules.
Software package for biological sequence analysis and better organization of the sequence data.
Uses a modified version of alistat from Sean Eddy's group Squid package (http://selab.wustl.edu/cgi-bin/selab.pl?mode=software)
A C++ library of high level motion analysis/computer vision functions, coupled with GUIs that allow easy configuration and use. Current development focuses on color tracking, multiple camera calibration and triangulation, and 3D tracking algorithms.
RStatServer is a system for quickly developing and deploying web applications that integrate statistical computations and graphics. It is built using the Zope web application develeopment system and the open-source statistical dataanalysis environment R
GCDPlot is a Microsoft Excel VBA program for geochemistry and geology dataanalysis. GCDPlot can use the Microsoft Excel data to plot scatter, ternary chart and discrimination diagrams that can be add, delete and modify by user.
ROOTSNNS is a set of C++ classes which allows one to use the Stuttgart Neural Network Simulator kernel (ansi-C) within the ROOT, a dataanalysis package. Multiple ANNs can be built, trained, and tested, while results and ANN performance can be saved.
GLTMon is a J2EE Web application that gathers data from your network devices (such as, routers and switches) via SNMP and saves the data into a MySQL database for reporting and analysis.