Search Results for "lab" - Page 9
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Showing 529 open source projects for "lab"
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DrawGlycan-SNFG
Renders glycans and glycopeptides with frag. info using SNFG format
...How to Cite: DrawGlycan-SNFG: a robust tool to render glycans and glycopeptides with fragmentation information Kai Cheng; Yusen Zhou; Sriram Neelamegham Glycobiology (2017) 27 (3): 200-205 Source code also available at: https://github.com/neel-lab/DrawGlycan-SNFGv2 Abstract & Full Text: https://doi.org/10.1093/glycob/cww115 -
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Venom
A Multi-hop Proxy for Penetration Testers
...The project uses an admin-and-agent architecture, allowing the controller to manage connected nodes and build proxy chains. Venom is useful for studying pivoting, internal routing, SOCKS proxying, and controlled traffic relay in lab or approved assessment environments. It supports several connection and forwarding behaviors, giving testers flexibility when working with different network paths. Because of its security-testing focus, it should only be used in environments where the user has explicit permission. -
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The purpose of this program is to calculate the phase transformation crystallography after a phase transformation and represent the results in graphical way such as in stereo graphic projection.The most recent crystallographic theories for both martensite and diffusional transformation are included.The variant selection during phase transformation could also be analyzed. The lattice matching near the interface, the superimposed diffraction patterns and so on can be readily simulated with...
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MX Linux Bare Server Edition Respin
MX Linux Bare Server Edition
Based on the MX18 Continuum (Minimal) Release by manyroads, this is an even more minimal version of MX-Linux intended for use as a base for configuring a server for use in a home environment, or in a lab for experimental use or as a learning platform. Other types of servers (Apache Web/PHP, MySQL, media, etc.) may be created by installing the appropriate packages from the MX Stable Repository using the MX Package Installer (MXPI.) Intrusion detection and system monitoring apps are also available. DISCLAIMER: using this or any other desktop-oriented Linux distribution as a server for mission-critical applications is not recommended. ... -
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cntnr
CLI wrapper for basic container (Docker/libpod) management tasks
...It is designed to work with your container runtime of choice (currently podman and docker). A CLI menu makes these selections possible. This project was created for a lab assignment in NSSA-244 Virtualization at the Rochester Institute of Technology. -
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Scalable Distributed Deep-RL
A TensorFlow implementation of Scalable Distributed Deep-RL
...This design allows the system to scale efficiently to hundreds of environments and billions of frames while maintaining sample efficiency and stability. The implementation supports training in DeepMind Lab (DMLab) and has also been adapted for other environments like Atari and Street View. -
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The Citrus project aims at collecting all the code for cancer systems biology developed by the Califano Lab. Including: ARACNe, pARACNe, DIGGIT and CINDy.
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CSS-Vise
A lightweight, minimal and mature vanilla CSS framework.
... - You may want a smarter and easier to learn minimal framework. - You need a library that is supported by 98% of web browsers. For docs and more visit Vise's github repository https://github.com/Appforge-lab/CSS-Vise -
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Jupyter Server Proxy
Jupyter notebook server extension to proxy web services.
Jupyter Server Proxy lets you run arbitrary external processes (such as RStudio, Shiny Server, Syncthing, PostgreSQL, Code Server, etc) alongside your notebook server and provide authenticated web access to them using a path like /rstudio next to others like /lab. Alongside the Python package that provides the main functionality, the JupyterLab extension (@jupyterhub/jupyter-server-proxy) provides buttons in the JupyterLab launcher window to get to RStudio for example. -
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A web based electronic lab notebook that is centred around the principles of Research Data Management.
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BeakerX
Beaker Extensions for Jupyter Notebook
...Polyglot magics and autotranslation, allowing you to access multiple languages in the same notebook, and seamlessly communicate between them. Apache Spark integration including GUI configuration, status, progress, interrupt, and tables. One-click publication with interactive plots and tables, and Jupyter Lab. BeakerX is available via conda, pip, and docker. Or try it live online with Binder. All of BeakerX’s JVM languages plus Python and JavaScript have APIs for interactive time-series, scatter plots, histograms, heatmaps, and treemaps. -
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CFD Python
Sequence of Jupyter notebooks featuring the 12 Steps to Navier-Stokes
...The module assumes only basic programming knowledge (in any language) and some background in partial differential equations and fluid mechanics. The "steps" were inspired by the ideas of Dr. Rio Yokota, who was a post-doc in Prof. Barba's lab until 2011, and the lessons were refined by Prof. Barba and her students over several semesters teaching the CFD course. We wrote this set of Jupyter notebooks in 2013 to teach an intensive two-day course in Mendoza, Argentina. -
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sjcl
Stanford Javascript Crypto Library
The Stanford Javascript Crypto Library is a project by the Stanford Computer Security Lab to build a secure, powerful, fast, small, easy-to-use, cross-browser library for cryptography in Javascript. SJCL is small but powerful. The minified version of the library is under 6.4KB compressed, and yet it posts impressive speed results. SJCL is secure. It uses the industry-standard AES algorithm at 128, 192 or 256 bits; the SHA256 hash function; the HMAC authentication code; the PBKDF2 password strengthener; and the CCM and OCB authenticated-encryption modes. ... -
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Amateur Radio Lab
Amateur Radio Lab
An amateur radio Linux has gcc, gcc-c++, gnuradio, gnuradio-devel, gnuradio-examples, gr-iio, gr-iio-devel, python2-gr-iio, quisk, fldigi, fmtools, fmtools-tkradio, fllog, gr-rds, tlp-rdw, ax25-apps, soundmodem, LinLog, flnet, fbb, horst, xlog, libax25, twlog, cqrlog, hamlib-c++, tcl-hamlib, gr-fcdproplus, perl-hamlib, uronode, python2-hamlib, gr-iqbal, python-hamlib, grig, chirp, flmsg, linsim, gr-osmosdr, xpsk31, codec2, xconvers, trustedqsl, libad9361, gqrx, hamlib, hamlib-devel, callgit,... -
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Formatomatic
Population Genetic File Creator and Converter
...I may eventually include other read or write formats (email me if there is some functionality you need and I will work on it if I have time). This program was initially developed for in-lab use to format microsatellite data extracted from a custom database system. I have made it available in case it is useful to others. My main objective was to convert from "Raw" format to others. I am motivated by how long I have seen colleagues spend formatting data. -
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Python ADB
Python ADB + Fastboot implementation
...It exposes high-level helpers for device discovery, shell commands, file push/pull, port forwarding, and log collection, making it easy to build automation around phones and emulators. Under the hood it speaks the ADB protocol directly and can connect via USB or over TCP, which is useful for lab setups and headless servers. Because it’s Python, you can compose device actions with your favorite testing, scraping, or data-collection libraries in one process. The project also includes utilities for robust connection handling and timeouts so flaky USB links don’t derail long runs. It’s well-suited to CI test farms, large-scale telemetry, and custom device control workflows. -
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spider tracking
Script developed to extract spider position and velocity in a maze.
This is a simple script designed to track the movement of a spider in a maze. It works under the specific lab conditions used to test the olfactory system in Loxosceles laeta. (https://www.ncbi.nlm.nih.gov/labs/articles/28499023/) However, it can be customized to work on different conditions. -
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Freetorials is a free platform lab tool in making interactive, embeddable and stunning tutorials.
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...Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the wiki: http://sourceforge.net/p/adamajava/wiki/Home/
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Brought to you by Software Systems Lab of Taipei Tech under the supervision of Prof. Yu Chin Cheng, ezScrum is a tool the let you create, manage, and keep the Scrum project information including user stories, tasks, unplanned items, and so on, in your server.
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sql-linux-lab
Scripts and documentation to get started with MS SQL Server on Linux
Sql-linux-lab provides a set of Transact-SQL scripts with associated documentation to get started with Microsoft SQL Server on a Linux server embedding persistent memory NVDIMMs. -
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BioNet-Finder
Network-based modeling and analysis for complex biological data
BioNet-Finder is a network-based genomic data modeling project, supported by the Multivariate Statistics lab of the Brain and Behavioural Science Department at University of Pavia (Pavia, Italy), to share data, methods, and code for network-based analysis of complex disorders. Our goal is to provide straightforward tools for data reduction, modeling, and interpretation, avoiding common issues, including data selection, database compositional biases, topological/hierarchical organization of data, genomic complexity, latent effects on the observed system, and output ranking. ... -
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MJP Lab is a site where the Modernist Journals Project can upload its MODS and TEI files for MJP journals and make them available for download to the general public. The site will be linked to a website where users can experiment with these files.
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redfish-lab
Get started with the Redfish RESTful API from the DMTF
Redfish-lab allows a smooth ramp-up with the Redfish RESTful API on an HPE ProLiant server, including UEFI/BIOS configuration with various scripting languages like PowerShell and Python. Small tutorials/articles are also proposed in the Wiki section.
