Search Results for "evolution linux" - Page 9
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Showing 531 open source projects for "evolution linux"
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TrajectorEE
Trajectories of Loci during Experimental Evolution
Visualizes trajectories of loci during experimental evolution using forward simulations -
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IQM-Plugin-FFI
FFI - fractal fragmentation index
This is an IQM plugin to compute the FFI index for binary digital images. This index represents a value for the compactness of an object. FFI is the difference between fractal dimensions of the area and its boundary. Fractal dimensions are computed with the popular Box counting method or the Pyramid method. Details can be found in: Andronache etal. Fractal analysis for studying the evolution of forests, Chaos, Solitons & Fractals, 2016, Vol 91, 310-318. Installation... -
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JRipples is an Eclipse plug-in that supports a programmer during software maintenance and evolution in two ways: it does relevant program analysis, and it manages organization of steps that comprise the impact analysis and subsequent change propagation. Further questions? Feel free to contact Yibin Wang (wybever@aliyun.com).
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SimplEvoFramework
Simple Evolution Framework in standard C
This software implements a general framework for experimenting and demonstration of evolutionary algorithms. The software is implemented in standard C and tries to be as general as possible. The user can implement his/her own fitness function and genotype representation. Since standard C is used the implementation of new fitness functions and gene types require a bit of archaic C programming. -
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osoe
One Student One ERP Project
The O.S.O.E. project aims at creating a new way to teach management, accounting, etc. We believe that a significant gap exists between how management science is tought and how things are really going on within each company. By using open source ERP5 as a support for management lectures, we hope to trigger an evolution in the way management is tought, to captivate students and prepare them even better for the harsh competition of globalized economy. -
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PANTHER project: software for modeling of protein sequence and function evolution, and tools for applying these data to the analysis of genome data, expression data and coding SNPs. Details available at http://www.pantherdb.org.
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SmarTree
Smart Swing JTree evolution
An extension of the class javax.swing.JTree with a lot of improvements and utilities. -
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cafe
CAFE: Computational Analysis of gene Family Evolution
CAFE: Computational Analysis of gene Family Evolution -
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Opt4J
Modular Java framework for meta-heuristic optimization
Opt4J is an open source Java-based framework for evolutionary computation. It contains a set of (multi-objective) optimization algorithms such as evolutionary algorithms (including SPEA2 and NSGA2), differential evolution, particle swarm optimization, and simulated annealing. The benchmarks that are included comprise ZDT, DTLZ, WFG, and the knapsack problem. The goal of Opt4J is to simplify the evolutionary optimization of user-defined problems as well as the implementation of arbitrary... -
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BayesRate
Bayesian estimation of diversification rates
BayesRate is a program to estimate speciation and extinction rates from dated phylogenies in a Bayesian framework. The methods are described in: Silvestro, D., Schnitzler, J. and Zizka, G. (2011) A Bayesian framework to estimate diversification rates and their variation through time and space. BMC Evolutionary Biology, 11, 311 Silvestro D., Zizka G. & Schulte K. (2014) Disentangling the effects of key innovations on the diversification of Bromelioideae (Bromeliaceae). Evolution, 68, 163-175. -
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r8s
Divergence time estimation on phylogenies
This package implements several methods to infer divergence times on a molecular phylogeny, using penalized likelihood, maximum likelihood and nonparametric rate smoothing methods. It also implements miscellaneous tree and character evolution models and tests. -
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PGAP
PGAP is a pipeline for pan-genome analysis.
PGAP is a pan-genomes analysis pipeline developed with Perl. It could perform five analytic functions with only one command, including cluster analysis of functional genes, pan-genome profile analysis, genetic variation analysis of functional genes, species evolution analysis and function enrichment analysis of gene clusters. -
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UBotSim
Robot Simulator for UBot Self-reconfigurable Robot
A simulation and evolution platform for UBot self-reconfigurable robot. More functions will come as soon as possible. Used libraries: MYGui3.2.0; OGRE1.8.0; Physx3.2; MTparser; GAlib;and other EAs including PSO, GEP etc. Precompiled SDK download site：http://dl.vmall.com/c07d135mza Operation System: Windows (Win 7 is prefered). Delveloping tool (IDE):Visual Studio 2010. -
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The Evolution Linux Project
Current Project: Makeiso For Arch Linux
The Evolution Linux Project has shifted focus towards a new effort called Makeiso. Makeiso is currently in the alpha development stage. The script and iso are made available for testing and feedback. Makeiso will make it easy to duplicate your perfectly customized Arch Linux installation. The Makeiso script will create a live ISO that will include an all new net-based, guided manual CLI installer. -
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Skill Map
A visualization of programmer skill maps
Skill‑Map is an open-source, collaborative project—originating from Geekbang—offering a structured visualization of programmer skill maps across domains like AI, front-end, backend, architecture, DevOps, and more. It serves as a navigable resource to organize learning paths and essential knowledge areas. Covers areas like AI, big data, architecture, frontend, backend, DevOps, testing, etc. Visual representation of programming and IT skill domains. Encourages community collaboration and... -
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LEA
Database Questions & QCM Generation
LEA is a PHP/MySQL web-based platform allowing to create questions using multiple choice answer, with one or multiple answer(s). It's an evolution of eTests ( https://sourceforge.net/projects/etests ). The branch of LEA is developed from sept 2014 to march 2015 before take his own way. The main language of this projet is French, but a large part of this project is comptatible in English -
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Forward Simulation
A Wright-Fisher forward population genetics simulation.
The forward simulation code is a tool to model evolution of a population under the Wright-Fisher model. The code incorporates population expansion, bottleneck, speciation and migration. Several selection and fitness mechanisms are available: selective sweeps, foreground selection in one region with a distinct background selection in neighboring regions, epistasis, and truncation selection. The code is implemented in the C++ programming language. -
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Projet d’une librairie permettant la gestion de fichiers au format vCard, l’export en CSV, la lecture, la modification et la fusion de fichiers vCard. La librairie a été réalisée pour pouvoir permettre la synchronisation et le traitement des portefeuilles de contacts de chaque commercial de la société ClearWater. Projet réalisé dans le cadre de l’UV (Unité de Valeur) GL02 à l’Université Technologique de Troyes. La partie spécification a été pris en charge par l’équipe Ulysse....
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gtkhst is a collection of GLib2 objects to compute statistics (mean, variance, correlations) in 1 and 2 dimensions and a set of Gtk2 widgets to display 1D and 2D histograms as well as trace plots showing the evolution with time of the monitored quantity
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DE-HEoC
DE-based Weight Optimisation for Heterogeneous Ensemble
We propose the use of Differential Evolution algorithm for the weight adjustment of base classifiers used in weighted voting heterogeneous ensemble of classifier. Average Matthews Correlation Coefficient (MCC) score, calculated over 10-fold cross-validation, has been used as the measure of quality of an ensemble. DE/rand/1/bin algorithm has been utilised to maximize the average MCC score calculated using 10-fold cross-validation on training dataset. The voting weights of base classifiers are... -
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GeneticAlgorithms
Framework for using the Genetic Algorithms optimization heuristic.
GeneticAlgorithms is a simple and lightweight framework to implement an optimization heuristic following the Genetic Algorithms model. A genetic algorithm mimics the natural processes of evolution, selection and "survival of the fittest". This framework is intuitive and good integrated with Java 1.5 SDK and later. -
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rochePlot
Schematically plot the evolution of binary stars
RochePlot is a Fortran code using PGPlot to plot a series of binaries to illustrate the key stages in the evolution of a binary star