Showing 4137 open source projects for "output"

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  • 1
    Repl.it

    Repl.it

    Online REPL for 15+ languages

    ...The project’s core idea is instant, zero-setup programming: open a page, pick a language, type, and run—no local installs or environment wrangling. It combines an in-browser editor with a runnable backend or sandbox so code can execute safely and return output in seconds. Sharing and collaboration are first-class: code can be saved, forked, and embedded, which makes it useful for tutorials, classrooms, and quick demos. The architecture leans on simple web technologies so the learning curve stays low for educators and new programmers. Even as the commercial product evolved, this archive shows the foundational approach to making coding accessible anywhere with just a link.
    Downloads: 2 This Week
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  • 2
    Visualization of Protein-Ligand Graphs

    Visualization of Protein-Ligand Graphs

    Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools

    NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/
    Downloads: 0 This Week
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  • 3
    VCF Explorer

    VCF Explorer

    A desktop application for analyzing whole genome VCF files

    he decreasing cost high-throughput technologies led to a number of sequencing projects consisting thousands of whole genomes. The paradigm shift from exome to whole genome brings a significant increase in the size of output files. Most of the existing tools which are developed to analyze exome files are not adequate for large VCF files produced by whole genome studies. In this work we present VCF-Explorer, a variant analysis software capable of handling large files. Efficient memory management of the program and the elimination of preliminary parsing step enable to carry out the analysis at ordinary computers. ...
    Downloads: 2 This Week
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  • 4
    Convolution arithmetic

    Convolution arithmetic

    A technical report on convolution arithmetic in deep learning

    A technical report on convolution arithmetic in the context of deep learning. The code and the images of this tutorial are free to use as regulated by the licence and subject to proper attribution. The animations will be output to the gif directory. Individual animation steps will be output in PDF format to the pdf directory and in PNG format to the png directory. We introduce a guide to help deep learning practitioners understand and manipulate convolutional neural network architectures. The guide clarifies the relationship between various properties (input shape, kernel shape, zero padding, strides and output shape) of convolutional, pooling and transposed convolutional layers, as well as the relationship between convolutional and transposed convolutional layers. ...
    Downloads: 0 This Week
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  • 5

    ooPorter

    A Porter stemming or stemmer algorithm coded in ooRexx

    ...This is not an example of good or fast (oo)Rexx programming, it is merely a demonstration of the Porter stemming routine ported to ooRexx, use and modify as necessary. Input to the program is a textfile with words to be stemmed, one per line. Output from the program ends up in the terminal window (standard out) and may be redirected to an output file. Syntax: rexx ooPorter myInputfile.txt > myOutputfile.txt The program only works for stemming English words. The source code is distributed under a free beer license; you are free to use the ooRexx source code as you please and no restrictions whatsoever apply as far as the type of beer is involved.
    Downloads: 0 This Week
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  • 6

    MSRE-HTPrimer

    A high-throughput primer design tool for MSRE-assay in epigenetics

    MSRE-HTPrimer is an open-source, portable, web-based and easy-to-use tool, which facilitates the design of primer pairs for epigenetic assay design and and genomic sequencing assay design. It uses a simple input and output model and can design primers for hundreds to thousands of target sequences in a single run. Moreover, it does not have any limitations on the number and size of target sequences. MSRE-HTPrimer provides significant improvements over existing solutions with following unique features: 1) visualization of primer pairs in UCSC genome browser, 2) search each resulting primer pair in UCSC In-Silico PCR database, 3) flexible primer selection and filtering based on custom quality matrix and 4) parallel primer design for several target sequences. ...
    Downloads: 0 This Week
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  • 7
    FontGL

    FontGL

    Texture font for OpenGL applications

    It consists of two modules. First module is a command line program which takes as input a truetype font (or other type) and extracts in an output png image the requested font glyphs. An xml used as input preferences and an xml or binary created as output with glyph properties. Second module is a OpenGL library to render such fonts. It is very abstract and very simple. Basically it is like a snippet.
    Downloads: 0 This Week
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  • 8

    DataMakerApi

    An API for Java programmers to make test data

    DataMakerApi is an API packaged as a jar for Java programmers to use in generating randomized test data in any quantity desired. An API is used because the output can take so many forms (SQL for traditional databases, JSON text for NoSQL databases, XML or delimited text for flat files, etc...). This API will facilitate the work of creating test data for a wide range of applications.
    Downloads: 0 This Week
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  • 9

    dxf2pcb

    Convert DXF drawings of circuit boards to gEDA-PCB files.

    This Python script reads in a DXF (ascii) file and generates a PCB output compatible with PCB Designer, part of the gEDA suite. It is designed for two purposes: One is to generate a PCB snippet from a mechanical drawing (such as a board outline), the other is to produce element files from CAD drawings. PCB snippets are easily imported into an existing gEDA-PCB project using File -> Load Layout to Buffer.
    Downloads: 0 This Week
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  • 10

    Buridan

    Tracker for buridan experiments, and analysis for trajectory data

    Buritrack is a program to track individual Drosophila fruit flies online with any camera as they walk in Buridan's paradigm. Available for Macs and PCs. The program extracts the coordinate locations of the fly and stores them in a text file. CeTrAn: centroid trajectory analysis: Tools written in R to analyze the flies' trajectories. Other types of trajectories may also be analyzed using the software.
    Downloads: 0 This Week
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  • 11

    FaRe

    Mathematica package for tensor reduction of Feynman integrals.

    ...This version is compatible with FeynCalc 9.0 FaRe is a Mathematica package for tensor reduction of Feynman integrals. The integral can be any-rank and any-order. Dimensional reduction is used and the final output is regrouped according to tensor structures. FaRe requires FeynCalc to work. Please refer to http://arxiv.org/abs/1507.03527 for a detailed manual. If you use FaRe in a scientific publication or talk, please give proper academic credit by citing http://inspirehep.net/record/1382623 For any information please write to: m.re-fiorentin AT soton.ac.uk
    Downloads: 0 This Week
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  • 12
    Kastor DSP (Radio Broadcasting Software)

    Kastor DSP (Radio Broadcasting Software)

    (Alternative Broadcasting Software)

    Kastor its an easy to use, streaming radio broadcasting tool. It supports ShoutCast and IceCast servers. The main purpose of Kastor is to stream live audio from your computers Mic or Line input with Shoutcast or Icecast servers. Recording is also possible,unlike other source clients it will automatically stream a set of audio files if it is setup that way. Kastor DSP features an internal mp3 player, a recorder and a minideck to mix down audio input from soundcard directly or through a...
    Downloads: 0 This Week
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  • 13
    cool-ascii-faces

    cool-ascii-faces

    Get some cool ascii faces

    cool-ascii-faces is a playful and popular JavaScript repository that collects a large library of quirky, fun ASCII faces that developers can use in command line apps, scripts, chats, or log output. It serves as a simple utility to inject character and humor into otherwise dry terminal output, making it popular among programmers who enjoy expressive, meme-style text art. With nearly two thousand stars, the repository provides a broad catalogue of emotive and whimsical face strings that can be programmatically accessed via code. ...
    Downloads: 0 This Week
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  • 14
    Colors and text effects are useful when you are reading your log files or when you are using base shell commands. ShSh is a set of skinnable commands that do it for you! ShSh scripts are written on PHP but are usable only on command line interface.
    Downloads: 0 This Week
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  • 15
    Question Answering Corpus

    Question Answering Corpus

    Question answering dataset in "Teaching Machines to Read & Comprehend"

    ...Each data instance consists of a news article (context), a generated question, and its corresponding answer, making it suitable for supervised machine learning setups. The output follows a standardized question-answer format, with entity mappings to help models resolve named references.
    Downloads: 1 This Week
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  • 16

    MIPVAR

    MIP VARiant calling tool

    ...Run command: java -Dsnappy.disable=true -Dlogging.config=/path-to-pipeline/MIPVAR-<version>-package/conf/logback.xml -cp "/path-to-pipeline/MIPVAR-<version>-package/lib/*" org.umcn.gen.mip.pipeline.RunMIPPipeline -sampleConfig /path-to-file/sampleConfig.txt -environment EMPTY -overridePipelineConfig /path-to-file/runConfig.txt Output: - Bam files per sample - VCF - Coverages per MIP per Sample
    Downloads: 0 This Week
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  • 17
    dtach is a program that emulates the detach feature of screen. It is designed to be transparent and un-intrusive; it avoids interpreting the input and output between attached terminals and the program under its control.
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    Downloads: 36 This Week
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  • 18
    LGTmate

    LGTmate

    Lateral Gene Transfer utility

    LGTmate is a simple and powerful bioinformatic software tool to identify lateral gene transfer events and contaminants in Eukaryotic proteomes. It is available as a GUI or command-line application, with no dependencies and no installation required.
    Downloads: 0 This Week
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  • 19

    Oracle PL/SQL Logger

    Oracle PL/SQL Logger - first in a series of useful oracle utilities

    A light-weight, simple to use, fine-grained Oracle PL/SQL logger utility allowing you to see the desired output at crucial points in your code. Set your logging level globally, for a specific package, procedure or function. Create logging entries independent on your transactions and without a need to recompile your code.
    Downloads: 0 This Week
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  • 20
    orbkit (Moved to Github)

    orbkit (Moved to Github)

    A Modular Python Toolbox for Cross-Platform Post-Processing of Quantum

    PLEASE NOTE ORBKIT HAS BEEN MOVED TO https://github.com/orbkit/orbkit orbkit is a parallel Python program package for post-processing wave function data extracted from output files of MOLPRO (Molden File Format), TURBOMOLE (AOMix file format), GAMESS-US, PROAIMS/AIMPAC (wfn/wfx file format), and Gaussian (Output File and Formatted Checkpoint File) output files. Futhermore, an interface to cclib, a parser for quantum chemical logfiles, is provided. If you use orbkit in your work, please cite it as follows: Gunter Hermann, Vincent Pohl, Jean Christophe Tremblay, Beate Paulus, Hans-Christian Hege, and Axel Schild, "ORBKIT: A Modular Python Toolbox for Cross-Platform Postprocessing of Quantum Chemical Wavefunction Data", J. ...
    Downloads: 0 This Week
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  • 21
    Reactive Extensions for JavaScript

    Reactive Extensions for JavaScript

    An API for asynchronous programming with observable streams

    ...Embrace ReactiveX's asynchronicity, enabling concurrency and implementation independence. Manipulate UI events and API responses, on the Web with RxJS, or on mobile with Rx.NET and RxJava. Avoid intricate stateful programs, using clean input/output functions over observable streams. ReactiveX's operators often reduce what was once an elaborate challenge into a few lines of code. Traditional try/catch is powerless for errors in asynchronous computations, but ReactiveX is equipped with proper mechanisms for handling errors.
    Downloads: 0 This Week
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  • 22

    Sched-SPM

    A C++ schedule generator based on Genetic Algorithm and Hill Climbing

    ...It is implemented with GALib (http://lancet.mit.edu/ga/), an open-source toolkit of Genetic Algorithms in various platforms including Unix and Windows. The input and output files of the software are required as XML format. The input file includes tasks' and employees' information according to predefined file format. The generated output XML file is accordance with Microsoft Project 2010 and could be open and edited within MS Project. It supports automated scheduling and rescheduling. Parameters of GA such as population size, generation number, mutation probability, and crossover probability, and human factors such as learning, communication overhead, learning, and schedule pressure, could be controlled by users.
    Downloads: 0 This Week
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  • 23

    TAPIOCA

    support software to enhance the usability of xTAPP by visualization

    ...By graphical user interface (GUI), this application helps xTAPP users for making input files, and visualizes results of wavefunctions, electron densities, and potential profiles into three-dimensional graphics from output files.
    Downloads: 0 This Week
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  • 24
    openCarac

    openCarac

    openCarac : Automatize your Spice simulator runnings

    openCarac aims to automatize the characterization of electronic circuits using your favourite Spice simulator and provide output files in HTML, LaTeX (c) and GNU Octave (c) scripts. openCarac is natively compatible with various simulators including: - Ngspice (c), http://ngspice.sourceforge.net - Gnucap (c), http://gnucap.org/dokuwiki/doku.php?id=gnucap:start - Xyce (c), http://xyce.sandia.gov It comes with an API which permits to add other features and extend openCarac compatibility; openCarac is also TCL package and comes with functions that can be called in any TCL script. ...
    Downloads: 0 This Week
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  • 25
    File Splitter

    File Splitter

    Splits text files to smaller ones using the lines count parameter

    Splits text files to smaller ones using the lines count parameter. Developed using Qt4. - allows to set select an input file, output directory and output filename pattern - allows to set lines count which indicate the maximum lines number the the resulting subfiles will contain - requires input text files to be UTF-8 encoded and creates correct UTF-8 encoded output
    Downloads: 0 This Week
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