Search Results for "read" - Page 81
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Showing 3586 open source projects for "read"
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VIGOR3
Annotation of Viral Genomes
VIGOR is a tool for annotating coding genes in viral genomes. It was developed by Jeffrey Hoover and Shiliang Wang for The JCVI Genomic Sequencing Center for Infectious Diseases (GSCID). http://www.biomedcentral.com/content/pdf/1471-2105-11-451.pdf contact: Jeff Hoover 301-540-7858 jefhv@aol.com -
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bmpstream
bmp manipulate
Bitmap data manipulate, written in Ansi C. Support both bmp file or bmp format data in memory. Bmp data(file) is take as a stream, you can open/close/create/read/write/seek/tell to the stream, and some special functions are provided, e.g. get rectangle, get line, merge(alpha blending). -
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Dia Diagram Editor
Free drawing software for Windows, Mac OS X, and Linux
...Dia supports more than 30 different diagram types like flowcharts, network diagrams, database models. More than a thousand readymade objects help to draw professional diagrams. Dia can read and write a number of different raster and vector image formats. Software developers and database specialists can use Dia as a CASE tool to generate code skeletons from their drawings. Dia can be scripted and extended using Python. -
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ciGen
ciGen is a short C++ code to generate cohesive interface elements.
...Cohesive interface elements constitute a simple to implement yet valuable tool to implement CZM. This project provides a simple C++ code that reads a finite element mesh, modify it and generate cohesive interface elements where needed. It can read Gmsh (http://geuz.org/gmsh/) or ABAQUS input files and write the mesh to any format such as ABAQUS and jive (http://www.dynaflow.com/en_GB/jive.html). The code was written by VP Nguyen (google scholar link: http://scholar.google.com/citations?user=jCqqCAoAAAAJ&hl=en) when he was at TU Delft and the algorithm is described in the article VP Nguyen, "An open source program to generate zero-thickness cohesive interface elements", Advances in Engineering Software, 2014(74), 27--39. ... -
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5
WhatsAppHack
Get your whatsapp media automatically to your PC
...Its extremely simple to use as the only thing you have to do (after installing it) is sit back and relax! Yes, you dont even have to run it after installation! it will start itself after you login and it will do its work without you having to intervene! Be sure to read the README file that comes with this download ZIP file though -
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ESSPEE - Penetration Testing & Forensics
(Android Forensics & Malware Analysis Included)
ESSPEE - Extreme Security Scanning Penetration testing & Exploitation Environment Ubuntu 12.04 LTS (Precise Pangolin) is purposefully selected as the base Operating System to obtain supports from Ubuntu for a long duration (till Apr 2017). It is packed with featured security tools with very less resource consumption and higher degree of stability. Thanks to Back Track, Blackbuntu, CAINE and DEFT and many others for inspiration. Being a sole developer to this distro, I wish it... -
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Encrypt
Allows you to encrypt files and plain text, then back again.
Encrypt is a small application which allows you to encrypt your files and even write plain text to be encrypted in GZIP code so it effectively cannot be read by humans. Your note passing, personal diary and more is safe. As well as that, it can decode your GZIP messages back into plain text so it can be read again. It is written entirely in Java, and is very easy to use. For more information on this application, please refer to my YouTube tutorial or send me an email at romejanic@gmail.com. ... -
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Fastfox
Fastfox : Mozilla Firefox Lightweight Version With More Feature
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Grid3D Toolbox
3D grid toolbox for analysis of molecular simulations
...A converter from the .g3d format to .vti, an XML based format of the VTK library is provided with the "Grid3D Toolbox", so that the generated density maps can be visualized using the ParaView data analysis and visualization software (http://www.paraview.org). For more details read the upcoming publication in Faraday Discussions: FD169: Density based visualization for molecular simulation. -
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10
SpectroHelp
helps color-blind persons to work with color
...Some modes are taken from commercial Eyepilot application, other modes added for fun/education. SpectroHelp has several tools and modes: * 'Wave tool' animates color selected by mouse across all image, and can help read complex colored diagrams like subways maps and pie charts * Dark and Light tool change lightness of all colors except selected by mouse * Some modes where introduced to map full color range to color range that is recognized by people with partial color blindness. Need more tests by comunity. * Some modes where introduced just to play with and see what is it looks like... -
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This package contains code for use with Short Read DNA Sequencing technologies, and includes packages for ChIP-Seq, Whole Transcriptome Shotgun Sequencing, Whole Genome Shotgun Sequencing, SNP Detection, Transcript expression and file conversion.
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...OpenMP was used for multi-threading so changes to the original code were minimal. For a demo, please download the sample data linked to below and follow the README from the tarball. Example read count data: http://www.cs.unc.edu/~wangwb09/GENSENG/reviseddata4hmm_300bpSlides_chr1.txt Suggested transition matrix file http://www.cs.unc.edu/~wangwb09/GENSENG/transition_init.dat The original code can be found at these locations: v0.1: http://www.cs.unc.edu/~wangwb09/GENSENG/GENSENG_download_page.html v0.3: https://sourceforge.net/projects/genseng/
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unicoder
C library to encode/decode Unicode to/from memory or files.
Unicoder is a C library to encode or decode Unicode. It can read from memory or files, as well as write to memory or files. Unicoder is licensed under the LGPL v2.1. -
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Concurrency Freaks
A library with Scalable (and fast) Read-Write locks
This library contains Java code for several Read-Write Locks: - ScalableRWLock: A rw-lock that scales with the number of threads doing read-lock. - ScalableRWLockS: Similar to above but different implementation. - ScalableStampedRWLock: An hybrid of the ScalableRWLock and the StampedLock provided in JDK 8, which provides good overall performance. - FAARWLock: Uses a Fetch-And-Add operation for the read-lock which means it is not so scalable as ScalableRWLock but it is still faster than classical implementations -
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File Scrambler
Scramble your files
Scrambler splits your files into a disired number of chunks and puts them together in a different order. This makes the file unreadable. In order to read them again you must unscramble them. Possible Uses: 1. Protect your private files (e.g. pictures, text, source file etc.) 2. Protect your hosted file on your website. (e.g. You can scramble the file and upload it. In order for the downloader to open the file he needs to unscramble the file. For this he will need the number of scrambles) -
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Arron-IMSA
Integrated Metagenomic Sequence Analysis for Next Gen Datasets
...IMSA then aligns the filtered reads to a user-defined universal database to characterize exogenous reads within the host background. IMSA assigns a score to each node of the taxonomy based on read frequency, and can output this as a taxonomy report suitable for cluster analysis or as a taxonomy map (TaxMap). IMSA also outputs the specific sequence reads assigned to a taxon of interest for downstream analysis. -
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An easy to extend Java Object formatter that currently supports conversion between JSON and Java. Because of its core architecture, other formats can easily be added (XML is already being worked on). Please read "Why JOFfree" in news area.
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Free c# barcode
professional barcode component specially designed for .NET developers
Spire.BarCode for .NET is a FREE and professional barcode component specially designed for .NET developers(C#, VB.NET, ASP.NET) to generate, read 1D & 2D barcodes. Developers and programmers can use Spire.BarCode to add Enterprise-Level barcode formats to their .net applications quickly and easily. Spire.Barcode for .NET provides a very easy way to integrate barcode processing. With just one line of code to create, read 1D & 2D barcode, Spire.BarCode supports variable common image formats, such as Bitmap, JPG, PNG, EMF, TIFF, GIF and WMF. ... -
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GoodbyeFtp
Access your files over the web using your Browser!
GoodbyeFtp is a rich, web alternative to FileZilla Client, FileZilla Server, WinSCP, SmartFTP, and more. No client installation - Just use your Browser! Download and install GoodbyeFtp on your computer. Forward port 44300 from your firewall to GoodbyeFtp, and now you can use any web browser to access your files from the Internet! With GoodbyeFtp you can upload and download files, preview images and documents, shrink images, zip files and folders, delete files and folders, client tools,... -
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FineSplice
Enhanced splice junction detection and estimation from RNA-Seq data
...Following alignment with TopHat2 using known transcript annotations, FineSplice takes as input the resulting BAM file and outputs a confident set of expressed splice junctions with the corresponding read counts. Potential false positives arising from spurious alignments are filtered out via a semi-supervised anomaly detection strategy based on logistic regression. Multiple mapping reads with a unique location after filtering are rescued and reallocated to the most reliable candidate location. FineSplice requires Python 2.x (>= 2.6) with the following modules installed: pysam (http://code.google.com/p/pysam/) and scikit-learn (http://scikit-learn.org/). ... -
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RLM Log Reader
Read usage log files from Reprise License Manager
This utility reads usage log files from Reprise License Manager (RLM) and produces reports that can be more easily read by a human and analyzed in spreadsheet software. RLM is a third-party license manager for Independent Software Vendors (ISVs) to enforce license policies with their products. RLM Log Reader is not affiliated in any way with Reprise License Manager or Reprise Software. For more information on their products, visit their website: http://www.reprisesoftware.com. -
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Pepgrep
Tool for peptide MS2 pattern matching in MS tandem dataset
...The Peptide-to-MS2 pattern matching can accumulate dozens of mass offsets corresponding to a variety of Post-Translational Modifications. Decoy peptide sequences are used with the tested peptide sequence to reduce false-positive results. Read article at: http://www.sciencedirect.com/science/article/pii/S1672022913000302 -
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libcontc
Container library in C.
...With the exception of a handful of assertions placed as an aid to debugging for the most common or fatal errors (underflow in pop operations, allocation failures), this library makes no attempt to protect itself. Please read 'algo' function documentation. Some of the functions have different behavior than the standard library equivalents. -
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f8544lcd
f8544lcd : PCD8544 Driver & GFX lib For Pinguino boards
...This lib is a free and individual Pinguino/ PIC18F C port/rewriting of a mix of Two C++ libs From Adafruit : - Adafruit PCD8544 and - AdaFruit GFX Known limitation : Can drive only 1 display.(as original library). Please read readme.txt and licence.txt Ported to Pinguino/Pic by Thomas Missonier (sourcezax@users.sourceforge.net). -
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BeatsGod
BeatsGod is a new program made for those who want to create in music.
READ BEFORE INSTALLING*** In order to safely install this program, you will need to install a program that will run BeatsGod (A URL is provided for you underneath this description, choose the URL based on your software you are using) nothing will be deleted or lost. Once that's finished installing, open the file labeled "BeatsGod (For Mac)" if you are a mac user or "BeatsGod (For Windows) if you are a windows user.
