Search Results for "structure" - Page 74
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Showing 2917 open source projects for "structure"
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Calculates Natural Product(NP)-likeness of a molecule, i.e. the similarity of the molecule to the structure space covered by known natural products. NP-likeness is a useful criterion to screen compound libraries and to design new lead compounds. Maven dependancy: <dependency> <groupId>uk.ac.ebi.cheminformatics</groupId> <artifactId>NP-Likeness</artifactId> <version>2.1</version> </dependency> Required repository: <repositories> <repository> <id>ebi-repo</id> <name>EBI maven repository</name> <url>http://www.ebi.ac.uk/~maven/m2repo</url> <snapshots> <enabled>false</enabled> </snapshots> </repository> </repositories> Latest version of the project is available here in our GIT repo https://github.com/CS76/NP-Likeness
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ProximityForest
Efficient Approximate Nearest Neighbors for General Metric Spaces
A proximity forest is a data structure that allows for efficient computation of approximate nearest neighbors of arbitrary data elements in a metric space. See: O'Hara and Draper, "Are You Using the Right Approximate Nearest Neighbor Algorithm?", WACV 2013 (best student paper award). One application of a ProximityForest is given in the following CVPR publication: Stephen O'Hara and Bruce A. -
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inidiffutils
IniDiffUtils compares, patches and filters INI files
IniDiffUtils is a package of Perl utilities that compares, patches and filters INI files. It works much as the GNU diffutils package works, but taking the INI structure of section, key and values into account. It is derived from Michael Rendell's wonderful and unique Regutils package now maintained here: https://sourceforge.net/projects/regutils/, but originally available here: http://www.cs.mun.ca/~michael/regutils. IniDiffUtils was separated from the other parts of RegUtils so that INI differencing, filtering and patching could be treated separately from the Windows registry focus of the original package. -
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"gtdev" is an open source tool which assists the engineer in developing a new gas turbine (1D Thermo- and Aerodynamics). It is created by the student research group "Hummingbird - TUM Gas Turbines" placed at the LFA, TU Munich: http://www.hummingbird.tum.de
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Kazuki
A small, customizable automation framework
...The aim of the project is to remain small and simple, there are no complex tool and yet can automate any website quickly and easily. Kazuki is built with BDD in mind, but it's not BDD, but rather a domain-specific language with a similar structure. The point of this is to make the code readable, while still being Ruby code in all it's extent. There is no pseudo-code/interpreter, you will be writing directly on ruby code, yet making it really easy and readable. To get started please read the Kazuki Tutorial at: https://sourceforge.net/p/kazu/wiki/Home/ -
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Multi-Column Row Comparator
Provides multi-column sort capabilities for row-based text file data
...The compare method assumes String arguments which are tokenized. These tokens represent the individual columns that are to be sorted based on rules that are injected prior to execution. The data structure of the file is also defined prior to execution. This implementation sorts the following column data types: - java.lang.String - java.Math.BigInteger - java.Math.BigDecimal - org.joda.time.DateTime Columns are sorted based on specified attributes, some of which are type specific. For example: - Treat Null as Low Sort Order (boolean) - Ascending Order (boolean) - DateTime Pattern (String) - BigDecimal Scale (integer) ... and others -
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AndEngine
Free Android 2D OpenGL Game Engine
...It abstracts much of the complexity of directly using OpenGL, letting developers more quickly build games with sprites, tilemaps, physics (via extensions), animations, and input handling, all within the Android ecosystem. Because it's tailored for Android, AndEngine integrates with typical Android project structure and lifecycle, although historically it was more aligned with Eclipse — meaning some adaptation might be needed for modern Android Studio projects. It enjoys a substantial community, many forks and extensions (for physics, tilemaps, multiplayer, live wallpapers, etc.), which increases its versatility — from simple casual games to more feature-rich 2D titles. -
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Juffrou
Java Utilities Framework For the Rest Of Us
Juffrou stands for Java Utilities Framework For the Rest Of Us and is a collection of useful classes or mini frameworks to help the java developer. Checkout the juffrou-reflect module if you are into performant java bean handling. There is also an xml marshaller / unmarshaller which is easy to use and has cool features like the Simplified Marshalling of nested beans. -
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q pipeline manager
q: integrated platform for pipeline configuration and management
The q utility is a platform for creating and managing data analysis pipelines. It expands the value of your existing job scheduler - either Grid Engine or TORQUE PBS - through numerous functions that help you organize, submit, monitor, manage and share your informatics work. Data processing pipelines require high-level organization and parallelization of work to optimize resource utilization and decrease the time to results. q (from queue) allows complex job sequences to be efficiently... -
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MadLib for PureBasic
A UserLib for Purebasic extend STL
...The library is an extension of the STL PureBasic. It includes a resident with structures and constants, in addition to the binary functions. All the functions, structure, constants are prefixed with madlib_ The compiliation is done in multilib (Thread, Unicode, threadsafe). -
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fav2dir
manage mp3 favorites playlist-songs
fav2dir (favorites to directory): a small Linux shell script to copy the music of your favorite mpd playlist to: 1. your portable mediaplayer, or 2. a back-up directory. It supports any mpd playlist and keeps the directory structure. More info on the wiki. -
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Structure your Web learning pages to different publics, including courses, cultural groups, or educational level. The system offers a teacher structuring tool and a student interface. Two learning interfaces are offeredd: tutorial and free navigation .
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Portfolio management GUI for fixed income securities. The program compute the present value, duration, convexity, yield to maturity of the portfolio according to the specified term structure. The term structure can be modified then the portfolio characteristic will be updated accordingly. The program need Microsoft Visual C++ 2010 Redistributable Package (http://www.microsoft.com/en-ca/download/details.aspx?id=5555)
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KnowledgeRoot is a knowledge base system that lets you structure your content in a tree. It integrates FCKeditor to make adding content easy.
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minydro
A simple hydrodynamic code less than 700 lines long!
A short and simple hydrodynamic Godunov code using a cell-based structure. This program is free to use. It was designed mainly for teaching purposes and it is made freely available in the hope that someone may find it useful. -
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BaGoMa backs-up and restores the contents of a GMail account. It can restore all the labels (folder structure), as well as the flags (seen/read, flagged) of a message.
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libkqueue
Portable implementation of the kqueue() and kevent() system calls
...libkqueue is a portable userspace implementation of the kqueue(2) kernel event notification mechanism found in FreeBSD and other BSD-based operating systems. The library translates between the kevent structure and the native kernel facilities of the host machine. -
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Hierarchical cluster engine HCE
Hierarchical Cluster Engine project
The main idea of this project – to implement the solution that can be used to: construct custom network mesh or distributed network cluster structure with several relations types between nodes, formalize the data flow processing goes from upper node level central source point to down nodes and backward, formalize the management requests handling from multiple source points, support native reducing of multiple nodes results (aggregation, duplicates elimination, sorting and so on), internally support powerful full-text search engine and data storage, provide transactions-less and transactional requests processing, support flexible run-time changes of cluster infrastructure, have many languages bindings for client-side integration APIs in one product build on C++ language... ... -
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POG ExtJS Code Generator
Php Object and ExtJS Code Generator - Make CRUD Form Quickly
UPDATE 2014-02-17: ExtJS 4.x Now Supported! Is a RAD tool that will save you time of development, creating a prototype of your web application using POG Php Object Genteror + ExtJS Javascript Framework to make from database table to interface in easy way and quickly just doing a couple of clicks. The idea of publishing this is: 0) To contribute my bit to excellent work done by the team of POG 1) For everyone in the community that we help all developing something that allows us to... -
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allink
Software for data analysis, image processing, simulations, solver.
Collection of utilities based on two basics classes: Matematica and VarData. Matematica) performs math operations on vectors and matrices for smoothing, interpolation, convolution, image processing... VarData) manipulate a structure of points connected by links. Addraw) openGL engine. ElPoly) analyze mechanical properties of polymer and membrane like structures. Addyn) perform molecular dynamics and Monte Carlo simulations and has a solver for 4th oder PDE. Avvis) perform all the operation of Matematica on different sets of data visualized on a Qt graphical interface. ... -
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SPE Toolbox
MatLab functions for reading WinView/WinSpec .spe files
This toolbox is a collection of MatLab functions for reading WinView/WinSpec files (.spe extension) directly to MatLab. It provides functions for reading full header from file into a structure, reading frames into matrices, and reading pixel values across all frames. You can use these functions to analyse and process experiment data stored in .spe files in MatLab, and to write functions to export .spe files to animated GIFs for use in presentations. Also includes simple MatLab application for converting files to GIF, AVI and .spe files, and provides functionality for quick addition of support for WinView-like formats by users, without the need to call developers. -
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Solitaire
A simple Solitaire game
A simple Solitaire game created to test the LinkedList structure. -
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S-BITE
S-BITE is an AS level topology generator for the Internet
The Structure-Based Internet Topology gEnerator (S-BITE) is an Autonomous System (AS) level topology generator for the Internet. The generator exploits a technique that partitions the network topology into two distinct blocks: the Core, which captures the underlying community structure of the Internet, and the Periphery, representing the “tendrils” of the topology. -
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RnaViz is a user-friendly, portable, GUI program for producing publication-quality secondary structure drawings of RNA molecules. Drawings can be created starting from DCSE alignment files if they incorporate structure information or from mfold ct files.
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This library implements a thread-safe skip list data structure - a kind of list with good insertion, deletion and searching performances. It uses Fred Fish's dbug library as internal tracing/debugging system. See the web site for more details.
