Search Results for "command line" - Page 71
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Showing 15165 open source projects for "command line"
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miRge3
Comprehensive analysis of small RNA sequencing data
An update to Python package to perform comprehensive analysis of small RNA sequencing data, including miRNA annotation, A-to-I editing, novel miRNA detection, isomiR analysis, visualization through IGV, processing Unique Molecular Identifieres (UMI), tRF detection and producing interactive graphical output. miRge3.0 is developed in python v3.8 and is a recent update of our previous version miRge2.0. This build includes command line interface (CLI) and cross-platform Graphical User Interface (GUI). For more details refer to documentation link below. -
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Euphoric tools
Companion Tools to Euphoric and other Oric emulators.
...Problem is that modern versions of Windows can't execute 16-bits applications anymore. I guess very few people have a use for DOS nowadays, so the Euphoric Tools collection will now be compiled as true 32-bits Windows Command Line applications. This way, they can be used on all 32-bits Windows versions, and also on current 64-bits Windows version (thanks to the Windows-on-Windows system)... Some of these tools are very old, maybe one day I will have to compile them as 64-bits applications. If these Tools are still useful to some people, then I will be able to say they have crossed several decades of PC platforms... ;-) PS: the quick and dirty sources are given, easy to compile on Unix... -
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User Friendly Thin Client | 100% Free
A completely free thin client OS for RDP & Citrix
A free thin client OS designed by a professional sysadmin to be very easy to setup, and so easy to use that your users can use it without instructions. You can have the thin client up and running within minutes and mass deploy it your way. -
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ConceptBase.cc
A Database System for Metamodeling and Method Engineering
ConceptBase.cc is a multi-user deductive and object-oriented database system for metamodeling and method engineering. Includes a graphical client that builds upon the logic-based features of the ConceptBase.cc server. The data model is O-Telos. ConceptBase.cc can represent information at the data level (example data, traces of process executions etc.), the class level (schemas, process definitions etc.), the metaclass level (constructs of modeling languages), the meta-metaclass level... -
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FileCut
Simple cross-platform application to cut and join any text file.
FileCut is a simple easy-to-use cross-platform application to cut to a given line and then join any text file. It is also possible to join in normal or reverse order. Works also from command-line interface, e.g. 'java -jar filecut.jar -c file.txt . 10', to cut 'file.txt' at line 10, and 'java -jar filecut.jar -j . >file.txt', to join files in the current directory in 'file.txt'. FileCut is portable, does not need installation and is developed in Java, so needs the Java Virtual Machine (version 6 or higher) that, in the case, is very easy to download and install. -
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MailCatcher
Catches mail and serves it through a dream
...Shows HTML, Plain Text and Source version of messages, as applicable. Rewrites HTML enabling display of embedded, inline images/etc and opens links in a new window. Command-line options to override the default SMTP/HTTP IP and port settings. Mail appears instantly if your browser supports WebSockets, otherwise updates every thirty seconds. Sendmail-analogue command, catchmail, makes using mailcatcher from PHP a lot easier. Encodings are difficult. MailCatcher does not completely support utf-8 straight over the wire, you must use a mail library that encodes things properly based on SMTP server capabilities. -
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ransfoil
console to calculate airflow around an airfoil based on RANS approach
RANSFOIL is a console program to calculate airflow field around an isolated airfoil in low-speed, subsonic, transonic or supersonic regime by numerically solving the Reynolds averaged Navier-Stokes (RANS) equations using mature computational fluid dynamics (CFD) method. As postprocess results, the aerodynamic parameters of the airfoil, e.g., lift coefficient and drag coefficient, can be integrated from the airflow distribution near wall boundary. In addition, the coupling between airflow and... -
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This project has a lively SVN repository for build recipes, over 1000 F/OSS softwares are available. The tool "pkgbuild" is for building packages on Solaris 11/OpenIndiana from RPM-like spec files. The tool also runs on OmniOS. If you want, you can create new style IPS packages and old style SVR4 packages for Solaris 10. The tool is not updated frequently, but the following "build recipes" for pkgbuild is updated every day. For a few hundred build-recipes see the sub-project...
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libmp4tag
MP4 tagging library
An MP4 tagging library where all tags can be accessed and modified. Any tags, unknown tags or custom tags are never lost when the audio or video file is updated. -
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proSeq
ProSeq is a GUI program to edit and analyse DNA polymorphism datasets
ProSeq ('Processor of sequences') is a package including GUI and command line programs to process and analyse DNA polymorphism data. It allows one to open and save sequence data in over a dozen file formats (and convert between these formats). It shows sequence alignments in a graphical window and allows the user to edit, manipulate and analyse sequences in various ways. ProSeq4 includes tools to analyse DNA polymorphism, scan for selection, do PCA and reconstruct phylogenies from sequence or SNP data. ... -
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PetoronHash-System
PHASH | post-quantum XOF hashing algorithm | C++20
PHASH is a self-contained, dependency-free, post-quantum XOF hashing algorithm implemented in modern C++20. This release delivers the first fully stable production implementation of the PetoronHash-System — a 1600-bit sponge-based hash function with domain separation, extendable output, and deterministic behavior. Key Features No external dependencies — pure C++20 implementation. Extendable Output (XOF) — supports arbitrary output length (256–8192+ bits). Post-quantum oriented design... -
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rx2fits
HF/VHF spectrosopy code for the rx888mk2 direct-sampling receiver
rx2fits is an SDR code for the rx888mk2 direct-sampling receiver that streams spectral data with frequency up to 65 MHz to FITS files. This code is for the direct-sampling input of the receiver, which transmits real samples over USB3 at up to 130 MHz sample rate. rx2fits processes these samples to spectral intensities via a Fourier-transform poly-phase filter bank, which provides spectral resolution approaching the spectral bin width with good stop-band and adjacent-channel rejection. ... -
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illness index
illness_index A Computer Program of a Medical Textbook.
A computer scientist has attempted to program a textbook of British general practice (primary care) medicine, that is, Hodgkin K (1978) "Towards Earlier Diagnosis....", 4th Edition, Churchill Livingstone. If a patient types presenting findings (such as headache, cough), the program prompts the user for expansion/denial of appropriate findings, in order to construct a list of patient findings. The program also calculates a list of likely diseases, which the user can use the web to find out... -
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ldap-searchEntries.pl is a small perl script that searches for entries based on a list provided by STDIN. The values given from STDIN are parsed into a filterstring containing placeholders. The found DNs are printed to STDOUT for each search. Parameters allow fine tuning of all features including attribute printing.
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CookieGuardAudit
A beginner-friendly Python CLI tool that audits website cookies.
CookieGuardAudit is a simple Python command-line security tool that checks a website's cookies for common security flag issues. It helps users quickly spot weak cookie settings such as missing Secure, missing HttpOnly, missing SameSite, and SameSite=None without Secure. This project is designed for beginners, defenders, students, and anyone learning basic web security auditing. -
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gbdbg
Debugger for the IceBoy CPU
A small command line debugger written in C# that communicates with the debugging unit inside the IceBoy CPU via UART. -
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lixa
LIXA, LIbre XA, is a free and open source XA transaction manager
LIXA (LIbre XA) is an open source and free Transaction Manager implementing the distributed transaction processing "XA specification" and "TX (transaction demarcation) specification" according to the X/Open CAE Specification. LIXA implements even XTA: XA Transaction API, an innovative API that implements XA transactional context passing among different applications. LIXA is a Transaction Manager but it's not a Transaction Monitor: this is the distinguishing feature of the project. LIXA... -
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ALI_Parse
Parser for the .ali (Ada Library Information) files generated by GNAT
...You find the .ali files in the same directories as the object files (.o) containing the machine code produced by GNAT. Currently, ALI_Parse is focused at cross-references within a set of Ada source files. Two command-line tools using the parser are provided: * GNATHTML, which generates a set of Web pages from Ada sources * ALI_Stats, which shows the list of entities, the list of cross-references, the count of references to each entity and the list of files. ALI_Parse is pure Ada 2012 and doesn't depend on any other resource. -
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Live Raizo - Linux for Virtual SysAdmin
Environment to experiment the system on simulated and real networks
- Live Raizo is a linux distribution based on Debian 13 (Trixie) to experiment the system administration on simulated networks and real devices. - GNS3 is the gui used to manipulate the simulators/emulators of networks and systems like QEmu, Docker, Dynamips. - With this GNS3, you can clone as many times as you want the templates of virtual linux machines named "Debian" and "DDebian" that contain many network tools and services. - The prompt and the output of several linux commands are... -
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Kindle_download_helper
Download all your kindle books script
Kindle_download_helper is a Python script for downloading Kindle books and personal documents from a user’s Amazon content library. It supports several Amazon regions, including Amazon, Amazon.cn, Amazon.de, Amazon.co.uk, and Amazon.co.jp. The workflow requires the user to log in through the browser, retrieve a CSRF token, and then run the script with the correct regional option. It can download purchased Kindle content and, depending on the flag used, personal document files as well. The... -
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vici
Vici - create a UNIX script using a flow chart interface.
Description Vici aims to make the UNIX command line programs easily available to the users of Linux GUI desktop environments. A flow chart can be built with commands and their parameters. This can then be saved as a script which can be installed into the user's desktop as an application. The script supports all Linux commands, pipelines, file redirection, variables, functions, and multiple threads of control. -
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Netpbm2Gimp
Convert Netpbm programs to GIMP plug-ins
Netpbm2Gimp automatically compiles the unmodified source code of a Netpbm graphics program into a GIMP plug-in. The result looks and functions like any other GIMP plug-in although it takes much less effort to produce than a hand-coded GIMP plug-in. -
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ldif-extract
Extrect selected entries from LDIF files like grep
ldif-extract is a small 'grep' like tool to extract and convert data from LDIF files. It could be used standalone or also in a pipe together with other tools like ldapsearch. -
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QBPWCF
PHP library for not only web-based application in Fedora Linux
此專案的目的是要建立簡單、易用、參數說明完整且富有調整性的PHP元件庫，讓PHP程式設計開發者可以輕鬆地建立高度客製化的應用。 套用當代的術語而言，就是要作為LOW CODE平台的函式庫。 -
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Time_limit
A windowed/full-screen countdown timer.
A windowed / full-screen countdown timer. Colour and font size changes are used as warnings. Progress-bar gives a glance at the time stream. Three different modes are available: - time left; - time passed; - ordinary clock. When the time is over several possibilities are available: - to show the defined message; - to continue count the time; - to launch another application; - to close the count-down timer. Useful for speech, lecture or presentation timing. Colour / font...