Search Results for "graph tool" - Page 6
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Showing 218 open source projects for "graph tool"
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MARAGAP
MARAGAP - Modular Approach to Reference Assisted Genome Assembly Pi...
...The optimal reference sequence is used as a template to infer inversions, insertions, deletions and SNPs in the target genome. MARAGAP uses an algorithmic approach to detect and correct inversions and deletions, a De-Bruijn graph based approach to infer the insertions, an affine-match affine-gap local alignment tool to estimate the locations of those insertions and a Bayesian estimation framework for SNPs. -
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TCP Segment Retransmission Viewer
View, graph, record TCP segment retransmission rates
...Trends can be seen over time graphically with the graph function, which allows panning, zooming, etc. If you find this tool useful please let me know! -
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GraphEditor
Graph editing tool
For creating graphs with can be exported to use in game making environments. -
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...Generation of diagrams representing graph and monoidal graph Generation of a random path (example of execution) finding elements in the limit of monoidal graph calculated from expression Program require that GraphViz tool was installed (available from www.graphviz.org)
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Train ML Models With SQL You Already KnowBuild and deploy ML models using familiar SQL. Automate data prep with built-in Gemini. Query 1 TB and store 10 GB free monthly.
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IsaPlanner is a collection of reasoning tools: a proof planner for Isabelle, implementing a Rippling based inductive theorem prover; theory synthesis tools for Isabelle; an open-graph based tool for reasoning about quantum information (quantomatic);
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GAuditor - The Graph Auditor Tool
A graph theory software for academic purposes
GAuditor is a software for use by students of graph theory. It helps solving problems like discovering the shortest paths from a single source vertex using Algorithyms like Dijkstra, Bellman-Ford and Floyd-Warshall, cycle detection, Eulerian circuit, Hamiltonian cycle, conectivity inspection, Breadth First Search, Depth First Search, etc. -
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ProGraphMSA
Graph-based multiple sequence alignment
ProGraphMSA is a state-of-the-art multiple sequence alignment tool which produces phylogenetically sensible gap patterns while maintaining robustness by allowing alternative splicings and errors in the branching pattern of the guide tree. This is achieved by incorporating a graph-based sequence representation as in POA and combines it with the advantages of the phylogeny-aware algorithm in Prank. -
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SIGMA
Metagenomic Assembly
OperaMS is a metagenomic scaffolding pipeline that takes in a metagenomic scaffold graph and aims to output near-complete individual microbial genomes in your environmental sample. It uses the following strategy: a graph partitioning tool called Sigma is used to decompose the metagenomic scaffolding problem into distinct single genome scaffolding problems that are then solved by the single genome scaffolder Opera. -
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steganoroute
Send steganographed text messages to mtr with fake hops in the network
Steganoroute is a tool to send steganographed text messages to another computer over the network. The receiver must make a traceroute to the sender using the mtr program (and pressing 'd' once to switch the display mode to the continuous graph). This tool, the sender, creates several fake hops and makes them answer the ICMP packets (or not) to write the letters one by one on the mtr client screen. -
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GrAMP
Graph Algorithm in MetaPost
A software tool to make easily graph algorithm illustrations in MetaPost. The resulting MetaPost-files can e.g. be incorporated in LaTeX-documents. -
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Agata Report is a cross-platform database reporting tool with graph generation and a query tool like Crystal Reports that allows you to get data from databases and export that data as many formats or even generate a complete ER-diagram.
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Java Fast Method Call Graph Generator
Analysis tool that generates method call graphs
The project's aim is to develop a fast Method Call Graph generator for the Java Programming Language. The search proceedure combines a Finite State Machine and ad hoc parsing to allow for fast access to method definitions and method calls within the source code. -
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symbion
3-D Java code comprehension tool based on runtime analysis
3-D Java code comprehension and visualization tool that allows the recording of the execution of a java program from an arbitrary point to another and visualizes the call graph in a 3-D environment, featuring a source code browser to aid code comprehension. https://docs.google.com/file/d/0B9tS9YG34Qd4RlVTMUo5UFRGUzg/edit -
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Planar Graph Generator
Planar graph generator based on Voronoi diagrams
This tool generates planar graphs, with the help of Voronoi diagram package (megamu.mesh) created by Lee Byron (see: www.leebyron.com/else/mesh/). An output graph is a JUNG graph object (see: https://sourceforge.net/projects/jung/). Be aware that the tool was not optimized neither for exceptions/errors handling nor for time/spatial complexity. -
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CloudPower
A tool for organising, visualising and executing Web resources.
CloudPower is a Java application that offers functionality similar to that found in operating systems, for the World Wide Web. References to Web resources, whether they be static or dynamic can be arranged into sets. These sets can themselves contain other sets, allowing for resources to be arranged like files on an operating system. These sets can be saved and retrieved, allowing users to organise their cloud resources. Two graph visualisations (hierarchy and energy) let users quickly... -
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iGraphics
The Graph Plotting Software
iGraphics Project, is an open source graph plotting software for mathematical functions and data. Written on Python and designed as a desktop tool for Linux OS -
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- Visual tool to help learn to take ownership and build a sense of responsibility - Customizable visual scorecard. Help self-identify strengths and weaknesses - Illuminate choices to help empower IMPORTANT: Please read the License terms (available under 'licenses' folder in your install directory) and User Agreement (https://sourceforge.net/p/toevisualizer/home/User%20Agreement/) before use. Your use of the software programs constitutes your acceptance of the License terms and User Agreement.
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Audacity AudioMonitor
Audacity AudioMonitor (customized version of of Audacity 1.3-13-b).
Audacity Audio Monitor (customized version of Audacity). The existing audacity is modified to support following functionality: - RTSP streaming to fetch the RTP data over UDP and plot the audio stream on the graph. - HTTP streaming to fetch the mp4 audio data using HTTP and plot the audio stream on the graph. - Display the tag label information on the graph.Tag information will be written to local disk file. - Audacity Audio Monitor shall have control buttons embedded in the... -
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The Atlas-Link software implements a greedy algorithm and uses graph theory to link and orient assembled existing contigs quickly and accurately using mate pair information.
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Search tool based on Tracker. Circare aims for a different way searching your Desktop, mixing together graph based data visualizations, RDF querys, metadata and descriptors gives you a complete interface to the (meta)Tracker indexer.
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GrMake is linux utility tool for creating 2-D and 3-D graph from user defined graph structure written in DOT language.
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Cgraph simulator is a tool to simulate common graph algorithms like bfs,dfs etc specially designed for algorithm learners. For detailed info visit: http://www.shafaetsplanet.com/cgraph/
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jLlama is a desktop application to monitor servers over SSH. Any figure retrieved from the command line can be polled and graphed in real time. Out of the box, jLlama can graph CPU and Memory usage for Linux and Solaris servers.
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RHOcker is a GTK graphic software tool for control and monitoring of electrical resistometry tests in GPIB devices. Allow to configure and manage resistometry test types and captures, stores and graph all data in tests execution.