Search Results for "binary analysis tool" - Page 48
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Showing 1962 open source projects for "binary analysis tool"
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GLProbs
GLProbs: Aligning multiple sequences adaptively
GLProbs is a simple and effective approach to improve the accuracy of multiple sequence alignment. We use a natural measure to estimate the similarity of the input sequences, and based on this measure, we align the input sequences differently. To test the effectiveness of this approach, we have implemented a multiple sequence alignment tool called GLProbs and compared its performance with a dozen leading alignment tools on three benchmark alignment databases, and GLProbs’s alignments has the... -
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PHParser
A Lexer and a Parser to PHP scripts
PHParser 1.2 generates a pure Java parser for PHP programs. Invoking this parser yields an explicit parse tree (AST) and a tree walker suitable for further analysis. This tool package is based upon: - ANTLR 3.2 or higher (www.antlr.org). - JDK 1.6 or higher (java.sun.com). - Grammar specifications of PHP 5.3. -
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QtCreator Similarity Analyser Plugin
Tool for code duplication detection in QtCreator projects.
This plugin intergate simian (Similarity Analysis) tool into QtCreator IDE. Fast and customizable source code checking for duplicated code fragments. Double click on similarity record open source code file and highlight text fragment. See wiki page for more info about settings and advanced using. -
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K-Surfer
A KNIME extension for the management and analysis of FreeSurfer Data
...For installation guide read the pdf inside the zip. References: Sarica Alessia, Giuseppe Di Fatta, and Mario Cannataro. "K-Surfer: A KNIME Extension for the Management and Analysis of Human Brain MRI FreeSurfer/FSL Data." Brain Informatics and Health. Springer International Publishing, 2014. 481-492. Sarica A, Di Fatta G and Cannataro M (2014). K-Surfer: A KNIME-based tool for the management and analysis of human brain MRI FreeSurfer/FSL Data. Front. Neuroinform. Conference Abstract: Neuroinformatics 2014. doi: 10.3389/conf.fninf.2014.18.00003 -
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OpenNEC is an open-source program based on the NEC2 core. NEC2 is a method-of-moments simulation and analysis tool for antennas and conductive structures such as metal towers. The current goal of the project is to recode the NEC2 core from ForTran into Octave and Matlab for cross platform use as a simulation and analysis tool with the powerful graphics and mathematical capabilities of those programs.
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BHS Debian (Hades Update)
BHS debian (testing) jessie/sid
BHS (Debian) New BHS release Based on Debian jessie/sid Kermel 3.12 KDE 4.11 Debian style and look Custom scripts!! Defcon tools!! New wifi scripts Multiarch support Top tools username: root password: BHS note: Don't forget to run the script located on the desktop to install the missing tools,because without to run it the menu will not be functional,if you not see it just download from here in the file section..sorry for the delay the upload stack for 2... -
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SIP Anonymization Tool (SiAnTo)
Small and effective program for SIP traces anonymization
The Session Initiation Protocol (SIP) is a signaling communications protocol widely used nowadays for controlling multimedia communication sessions such as voice and video calls over Internet Protocol (IP) networks. A good way to design optimization techniques for SIP deployment would be to analyze SIP traffic from existing networks. However, publicly available analyses of SIP traffic are rare and thus not a lot of knowledge exists about typical behavior of a SIP server (as opposed to, for... -
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Weka4OC GUI for Overlapping clustering
Weka4OC: Weka for Overlapping Clustering is a GUI extending WEKA
This is a GUI application for learning non disjoint groups based on Weka machine learning framework. It offers a variety of learning methods, based on k-means, able to produce overlapping clusters. The application also contains an evaluation framework that calculates several external validation measures. The application offers a visualization tool to discover overlapping groups. -
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A desktop diary application. It implements a calendar for multiple daily annotations with binary attachments, details list, internal links, advanced search tool, CSV, XML and HTML reports, HTML note editor, encrypted data storage and password access.
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eRNA
A RNA data analysis tool
eRNA: A RNA data analysis tool for high-throughput RNA sequencing experiments -
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Dependency Discovery Tool
A tool for discovering external dependencies in Office files.
The Dependency Discovery Tool searches through binary office files (.doc, .xls and .ppt) and tries to find any documents or files that are linked to the document. It is written in java, using the Apache POI libraries ( http://poi.apache.org ) This project was part of a summer scholarship from the School of Engineering and Computer Science at Victoria University, Wellington (http://ecs.vuw.ac.nz) in conjunction with Archives New Zealand ( http://archives.govt.nz ). ... -
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BriPy
A BRIC-seq data analysis package written in Python.
...-What is BriPy? BriPy package is a BRIC-seq data analysis tool written in Python. It can calculate RNA half-life for each transcript and draw graphs describing the kinetics of RNA decay. In the future, it will provide several useful modules(e.g. calculating RPKM of each transcript from BAM file or ELAND output file). -Prerequisites To use BriPy package, you will need Python and the following extension packages. -
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TOPS_CeMM
User Friendly Data Analysis Tool for Interaction Data
TOPS provides the benchtop scientist with a free toolset to analyze, filter and visualize data from functional genomic gene-gene and gene-drug interaction screens with a flexible interface to accommodate various different technologies and analysis algorithms in addition to those already provided here. -
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PixelDbg
Visualize any data stream, recover images, save images as files.
Turn any data stream into an image and observe various patterns and pictures. Recover images from corrupted or unknown archives (i.e. Windows hibernation files, binary dumps, etc.). Change channel order and pixel format on the fly to interpret given data in different ways. Easily adjust scanline and image tiling while inspecting data. Observe if given data stream has high entropy. Save currently visible data as an image and analyze it later. -
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rdesktopgui-binary
rdesktopgui rdp rdesktop
rDesktopGui is a frontend to the UNIX/Linux tool 'rdesktop' written in FreePascal with an easy to use interface. This project was registered on SourceForge.net on Mar 28, 2013, A front-end for rdesktop (Windows TS Client) that is simple but powerfull. -
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SystemCt
A powerful tool with globle and visual view for System log analysis
This simple SystemCt tool is used to analyze various kinds of Server or Apps logs which are usually bigger or larger and not easy to be manually processed. The advantage of SystemCt is to provide a global and visual view (i.e. a spiral chain with issue nodes) rather than the traditional style (i.e. text style) which helps to pinpoint quickly serious issues that happen to the Server or Apps, which always trouble the developers, supporters and admins, etc. -
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GENIE (GEne-geNe IntEraction)
GPU based Parallel Gene-Gene Interaction Analysis
...Most of the latest Central Processing Units (CPUs) have multiple cores, whereas Graphics Processing Units (GPUs) also have hundreds of cores and have been recently used to implement faster scientific software. However, currently there are no genetic analysis software packages that allow users to fully utilize the computing power of these multi-core devices for genetic interaction analysis for binary traits. Here we present a novel software package GENIE, which utilizes the power of multiple GPU or CPU processor cores to parallelize the interaction analysis. Citation: Chikkagoudar, S., Wang, K., & Li, M. (2011). ... -
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...If you are using IJBlob in a scientific publication, please cite: Wagner, T and Lipinski, H 2013. IJBlob: An ImageJ Library for Connected Component Analysis and Shape Analysis. Journal of Open Research Software 1(1):e6, DOI: http://dx.doi.org/10.5334/jors.ae
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ISSE
An Interactive Source Separation Editor
In applications such as audio denoising, music transcription, music remixing, and audio-based forensics, it is desirable to decompose a single-channel recording into its respective sources. To perform such tasks, we present a new software tool to perform source separation by painting on time-frequency visualizations of sound. Initial results shows the software can achieve state-of-the-art separation results compared to prior work. -
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THE tool for monitoring traceability between requirements and Java code. Create a traceability matrix using annotations. Report format: HTML.
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Enc2ly
A music notation converter from Encore to Lilypond.
enc2ly is a small tool to dump musical information contained in an Encore binary file to a Lilypond text one. Encore is a popular music notation program from GVOX, which uses a proprietary data format. -
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cravlAndBlock
linux tool to improve server security
cravlAndBlock is simple java application that cravl error log file of Your web server and add all attacker IPs. I.E. All Modsecure entries, scans and so on. Every bad IP will be added to hosts.deny file with ALL prefix. For sure it will not block all atacks but it will help. How it works: use cron to start java cravlAndBlock.jar in the same folder add properties.xml (I addes sample properties.xml file). And thats all. Program will start from cron, read properties file and make... -
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Genomic Binding Sites Analyser (BiSA)
Genomic Region Archiving and Binding Sites Analysis (BiSA)
...BiSA can also annotate binding regions of interest with nearby genes. The results of overlap analysis can be imported into the Knowledge Base, allowing them to go into downstream analysis and independent annotation. A Venn diagram tool is also integrated into the software to allow users to visualize overlap results. -
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Census is a comprehensive cross-platform project manager and integration hub for NONMEM, the gold standard tool for model-based pharmacometric data analysis.
