Showing 113 open source projects for "blast"

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  • 1
    Cunningham is an open source BLAST runtime estimator. This software utilizes sequence composition statistics and linear models to rapidly estimate runtime. Cunningham is used in CloVR (http://clovr.org) for efficient autoscaling in the cloud.
    Downloads: 0 This Week
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  • 2
    BeoBLAST is a package for performing multiple simultaneous BLAST and PSI-BLAST runs on a Beowulf cluster.
    Downloads: 0 This Week
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  • 3
    FONZIE
    FONZIE is a bioinformatic tool written in Python developed for the genetic cartography speciality. FONZIE allow as well to find markers on a set of sequences than to find associate oligonucleotides. http://www.biomedcentral.com/1756-0500/3/322/abstra
    Downloads: 0 This Week
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  • 4
    Automatically produce functional annotations for prokaryotic genomes, consisting of protein name, EC number, GO terms, & TIGR role. Initial version developed by JCVI; uses BLAST hits from Panda sequence database, and HMM hits from TIGRFAMs and Pfams.
    Downloads: 0 This Week
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  • 5
    This is the mini-nuke thats been so hard to get but finally I've got it back.I don't take any credit for this weapon except modifying it so it has a namecheck. Now blockland users can blast things to oblivion, enjoy!
    Downloads: 0 This Week
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  • 6
    Text2Genome is a set of scripts to extract nucleotide sequences from scientific articles and to map them to genomes and genes using a local alignment algorithm (BLAST/BLAT)
    Downloads: 0 This Week
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  • 7
    FusionMiner
    FusionMiner is a molecular biology program which accepts genomic alignments in BLAST/BLAT tabular output and attempts to find true fusion transcripts. A single command runs the pipeline and generates results.
    Downloads: 0 This Week
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  • 8
    A simple C++/ SDL multi-player game, you control a tank as you try to blast your way through terrain to destroy your opponent, with a friend online, or just chat inside the lobby. * still in very early development stages.
    Downloads: 18 This Week
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  • 9
    GaugeBook
    GaugeBook displays Gauges of your FSX (with SP2 or Acceleration) and gives you control over a lot of Settings. Change Frequencies, QNH, etc with a few mouse clicks. It's still beta but the new G1000 is a blast. Runs smooth on any notebook.
    Downloads: 1 This Week
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  • 10
    NCBI Toolkit for Linux extended with contextual version of the PSI-BLAST algorithm.
    Downloads: 0 This Week
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  • 11
    Blaem
    It's a 3d shooter but in 2d side scroller fashion (something like Duke Nukem Manhatan Project). The title is a shortened Blast Them. Still in early development.
    Downloads: 0 This Week
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  • 12
    Blast Explorer facilitates Blast results exploration
    Downloads: 0 This Week
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  • 13
    JAMBLAST: Java Application Manager for the ncbi BLAST results. It is a graphic application that allow the user to display, filter, sort, import/export, store/manage BLAST results produced with the NOBLAST (https://sourceforge.net/projects/noblast).
    Downloads: 0 This Week
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  • 14
    Example implementation of recursive BLAST method used for conservative gene orthology detection in whole genome data.
    Downloads: 0 This Week
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  • 15
    NoBlast provides a new extended user friendly csv output format and offers an option to correct the statistics when split databases are used for NCBI BLAST programs (Blastn, Blastp, Blastx, Tblastn and Tblastx).
    Downloads: 0 This Week
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  • 16
    Zerg is a very fast BLAST parser library written in C with the help of the Flex lexical analyzer generator.
    Downloads: 0 This Week
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  • 17
    A bioinformatics package to analyse ESTs (Expressed Sequence Tags) easily. It contains functionalities of ESTs for EST submission, Batch BLAST and BLAST result parser, etc. easiEST contains JAVA GUI applications for analysing ESTs or other sequences
    Downloads: 0 This Week
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  • 18
    The purpose of Mitrion-C Open Bio Project is to develop FPGA accelerated bioinformatics applications for the Mitrion Virtual Processor. The first accelerated application is NCBI BLAST.
    Downloads: 0 This Week
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  • 19
    IGBM (Identification of gene blocks in microorganisms) implements a BLAST-like method to infer conserved gene clusters among closely related prokaryotes, and provides a graphical user interface to navigate the identified clusters and their annotated info
    Downloads: 0 This Week
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  • 20
    FORce based Cluster Editing (FORCE) is a Java software heuristically solving the graph cluster editing problem on weighted edges using BLAST E-values. It further provides a training mode for heuristic parameter estimation.
    Downloads: 0 This Week
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  • 21
    Blast!! is light, usable, keyboard driven application launcher based on Qt toolkit
    Downloads: 0 This Week
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  • 22
    SmallBASIC version of the Daleks game, based on the Dr. Who TV series. Crash the Daleks into one another, avoid their debris while leading others into it. Teleport randomly when cornered and blast all surrounding Daleks with your Sonic Screwdriver!
    Downloads: 0 This Week
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  • 23
    VMTW (Vaïreni Minhoca Total Warfare) is a project of a 3D, turn-per-turn blast-your-oppenent game (Worms3D like). Players use shotgun, submachines, explosive bananas and air strikes to kill or sunk the ennemy.
    Downloads: 0 This Week
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  • 24
    FSA-BLAST is a new version of the popular BLAST (Basic Local Alignment Search Tool) bioinformatics tool, used to search genomic databases containing either protein or nucleotide sequences. FSA-BLAST is twice as fast as NCBI-BLAST with no loss in accuracy.
    Downloads: 0 This Week
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  • 25
    BLASTgres is a set of modules that can be added to PostgreSQL for data management of biological sequences. It extends PostgreSQL with datatypes for sequence information and middleware for dynamic access to sequence analysis tools & services like BLAST.
    Downloads: 0 This Week
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