Search Results for "log analysis tools" - Page 37
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Showing 2011 open source projects for "log analysis tools"
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Ship Agents FasterGemini Enterprise Agent Platform lets you rapidly build, scale, govern and optimize production-ready agents grounded in your organization's data. The platform enables developers to build custom or pre-built agents for virtually any use case. New customers get $300 in free credits.
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Amazon Mobile Analytics SDK JavaScript
Amazon Mobile Analytics JavaScript SDK
The Mobile Analytics SDK for JavaScript allows JavaScript-enabled applications to create and submit events for analysis in the AWS Console and through Auto Export to S3 and Redshift. The library uses the browser's local storage API to create a local cache for the data, allowing your web application to batch and record events even when the app is offline. You can record monetization events to enable reports such as Average Revenue Per User (ARPU) and more. Additional app and environment... -
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PEG.js
PEG.js is a parser generator for JavaScript
PEG.js is a simple parser generator for JavaScript that produces fast parsers with excellent error reporting. You can use it to process complex data or computer languages and build transformers, interpreters, compilers and other tools easily. PEG.js is still very much work in progress. There are no compatibility guarantees until version 1.0. Based on parsing expression grammar formalism, more powerful than traditional LL(k) and LR(k) parsers. Usable from your browser, from the command line,... -
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Pathway-PDT
Pathway-PDT: A Flexible Pathway Analysis Tool for Nuclear Families
Pathway analysis based on Genome-Wide Association Study (GWAS) data has become popular as a secondary analysis strategy. Although many pathway analysis tools have been developed for case-control study, there is no tool that can use all information from raw genotypes in general nuclear families. We developed the Pathway-PDT, which uses the framework of Pedigree Disequilibrium Test (PDT) for general family data, to perform pathway analysis. ... -
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ISVASE
identification of sequence variant associated with splicing event
To generate correct mature mRNAs, the exons must be identified and joined together precisely and efficiently by RNA splicing mechanism. It is to be noted that about one third or a half of all disease-causing mutations effect RNA splicing. However, there is little bioinformatics tools to directly identify sequence variants associated with splicing events (SVASE) based on RNA-seq data. We developed ISVASE, a simple and convenient tool for identifying SVASE directly using RNA-seq data.... -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Suite of tools for DNA sequence analysis - searching (EST, mRNA, sequencer reads); aligning (ESTs, mRNA, whole genome); and analysis (repeats, kmers).
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This RRDTool Framework provides a central HTTP-based service for import into standard RRD DBs and graph generation. A lightweight, easily extendable agent for the data sources is pushing updates with minimal resource consumption on the master service.
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Zika-RNAseq-Pipeline
An open RNA-Seq data analysis pipeline tutorial
...The pipeline uses state-of-the-art tools and can run on various platforms with minimal configuration overhead. The pipeline enables the extraction of knowledge from typical RNA-seq studies by generating interactive principal component analysis (PCA) and hierarchical clustering (HC) plots, performing enrichment analyses against over 90 gene set libraries, and obtaining lists of small molecules that are predicted to either mimic or reverse the observed changes in mRNA expression. -
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PANTHER project: software for modeling of protein sequence and function evolution, and tools for applying these data to the analysis of genome data, expression data and coding SNPs. Details available at http://www.pantherdb.org.
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perf-tools
Performance analysis tools based on Linux perf_events and ftrace
A miscellaneous collection of in-development and unsupported performance analysis tools for Linux ftrace and perf_events (aka the "perf" command). Both ftrace and perf are core Linux tracing tools, included in the kernel source. Your system probably has ftrace already, and perf is often just a package add. These tools are designed to be easy to install (fewest dependencies), provide advanced performance observability, and be simple to use: do one thing and do it well. ... -
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ngopt
de novo assembly & analysis of Illumina sequence data
de novo assembly & analysis of Illumina sequence data, including the A5 pipeline, A5-miseq, tools to evaluate assembly quality, and scripts to facilitate data submission to NCBI and the RAST annotation system -
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P3BSseq
Parallel processing pipeline for analysis of bisulfite sequencing data
Bisulfite sequencing (BSseq) processing is among the most cumbersome next generation sequencing (NGS) applications. Though some BSseq processing tools are available, they are scattered, require puzzling parameters and are running-time and memory-usage demanding. We have developed P3BSseq, a parallel processing pipeline for fast, accurate and automatic analysis of BSseq reads that trims, aligns, annotates, records the intermediate results, performs bisulfite conversion quality assessment, generates BED methylome and report files following the NIH standards. ... -
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Libre Mechanics
Open Knowledge on engineering development.
Libre Mechanics it’s an Open Knowledge project created to offer a useful platform of information related with the development and research of Mechanical Engineering themes and similar fields, higly related with the use of Open Source and Software Libre tools. Here you will find a wide variety of projects, publications and scientific material available as references for developing their own projects, also guides and tutorials that allow you to take advantage of free software tools available today. The four principal lines of work are: Design Analysis and Simulation Automation and Robotics Development -
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Mercenary Linux
Linux Distro Built specifically for Cyber Hunt Team Operators
The MERCENARY Linux Distro is Built specifically for Cyber Hunt Team Operators. This is the first iteration of this distro, with several tools, including Mercenary Hunt Framework being added with the next release (Early 2017). This Distro contains the most well known and respected forensic tools all conveniently installed on one system. Tools included are: mercenary hunt framework(**soon), Powershell, OMI, SIFT, wmic, winexe, radare2, viper, pescanner, jsdetox, volatility, maltrieve, rekall, mastiff, v8, crits, bro, netsniff-ng, wireshark, chopshop & Much More. ... -
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BioC
We describe a simple XML format to share text documents and annotation
A minimalist approach to share text documents and data annotations. Allows a large number of different annotations to be represented. Project files contain: - simple code to hold/read/write data and perform sample processing. - BioC-formatted corpora - BioC tools that work with BioC corpora BioC goals - simplicity - interoperability - broad use - reuse There should be little investment required to learn to use a format or a software module to process that format. We are... -
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VITAMINS
Visual and Insitu Analytics for Molecular Interactive Simulation
A framework to support the high performance analysis and visualisation of molecular dynamics trajectories directly acquired in-situ while the simulation is running, or read from files. Vitamins relies on the FlowVR software and comes with binding with Gromacs. Vitamins (Visual and In Situ Analytics for Molecular Interactive Simulation) is an open source framework for the analysis and visualisation of large molecular dynamics trajectories directly acquired in-situ while the simulation is running, or read from files. ... -
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ds-Bidens
Software for studying bacterial colony features
...The software (ζ-Bidens) was programmed using C++, Perl and wxBasic programming languages. ζ-Bidens provides key tools for studying bacterial colony images as: texture analysis, invariant moment and color (CIELab) calculation, etc., simplifying operations previously carried out by MatLab applications. Additionally ζ-Bidens offers to the users a versatile environment for the study and identification of bacterial colonies -
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thinkpad-ec
Infrastructure for examining and patching Thinkpad embedded controller
thinkpad-ec is a community effort to study and patch the embedded controller (EC) firmware used in certain classic Lenovo ThinkPad models. The EC is a tiny microcontroller that governs low-level features such as keyboard scan codes, fan behavior, battery checks, and thermal policies—things the operating system can’t normally change. This project documents the EC’s layout and provides tooling to extract, analyze, and modify EC images so users can apply specific fixes or enhancements. Common... -
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WIMSi
Bioinformatics Tools for the Anaysis of DNA Methylation Data
Genome-wide DNA methylation analyses find only modest correlations between differential methylation at gene promoters and expression. We created a new approach to methylation analysis based on shape-similarity that finds stronger associations between methylation and expression than previously observed. WIMSi includes both DISCOVERY and GENE LIST tools. The DISCOVERY tool is designed to discover patterns of methylation that correlate with differential expression, with minimal prior assumptions about what patterns should exist in the data. ... -
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E-Reader
Extreem Reader for Cosmological simulation data P-Gadet2 and ART codes
Extreem Reader for Cosmological simulation data P-Gadet2 and ART codes.It conserves memory by using memory mapped files. Contains some basic analysis tools such a KD-Tree, Minimum Spanning Tree, and rendering module using PMViewer algorithm. -
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Buridan
Tracker for buridan experiments, and analysis for trajectory data
Buritrack is a program to track individual Drosophila fruit flies online with any camera as they walk in Buridan's paradigm. Available for Macs and PCs. The program extracts the coordinate locations of the fly and stores them in a text file. CeTrAn: centroid trajectory analysis: Tools written in R to analyze the flies' trajectories. Other types of trajectories may also be analyzed using the software. -
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cFS Unit Test Assert (UT-Assert) Library
Unit Test Assert Framework for the core Flight System (cFS) Components
...These tools implement an assertion-based testing philosophy that requires the developer to explicitly write verification statements that assert whether a condition is true or false. This approach is much different than a unit test that creates a log file that requires a developer to analyze in order to determine whether a test passed or failed. -
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VCF Explorer
A desktop application for analyzing whole genome VCF files
he decreasing cost high-throughput technologies led to a number of sequencing projects consisting thousands of whole genomes. The paradigm shift from exome to whole genome brings a significant increase in the size of output files. Most of the existing tools which are developed to analyze exome files are not adequate for large VCF files produced by whole genome studies. In this work we present VCF-Explorer, a variant analysis software capable of handling large files. Efficient memory management of the program and the elimination of preliminary parsing step enable to carry out the analysis at ordinary computers. ... -
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SWsterisk Debian based Asterisk
Asterisk and FreePBX on Debian, by Astiostech Sdn Bhd Malaysia
DOWNLOAD | EXTRACT | USE A ready to use Virtual Image or VMDK of Asterisk 11/13, FreePBX 2.11/12.0. Network: After booting, run #ifconfig -a Then either #dhclient ethX or edit manually /etc/network/interfaces #ifup ethX More details can be found here: Asterisk 11: http://highsecurity.blogspot.com/2013/04/sanjay-asterisk-debian-based-asterisk.html Asterisk 13:... -
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LOOS
Analyze molecular simulation data
LOOS is a light-weight object oriented software library for creating new tools for analyzing molecular simulation data, written in C++. The main design goal is to allow casual programmers to easily implement new analysis methods. THIS PAGE IS NO LONGER UPDATED. Please see https://github.com/GrossfieldLab/loos for all recent developments -
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SPRITE
Parallel SNP detection pipeline
SPRITE is an open-source software package providing a parallel implementation of the Single Nucleotide Polymorphisms (SNP) detection genomic data analysis workflow. It consists of three tools: PRUNE for read alignment, SAMPA for intermediate file processing, and PARSNIP for parallel SNP calling.
