Search Results for "algorithm" - Page 37
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Showing 1992 open source projects for "algorithm"
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CalPCS
A pitch class set analyzer.
CalPCS is a free pitch class set calculator software. System requeriments: Java Runtime Environment 1.6 or above. Screen of at least 800x600px. Optional: A Java Sound Bank. The program displays for each set their normal order, classification, transposition, whether it is an inversion, prime form, interval vector and the invariant property. -
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cmotif
A method for mining conditional phosphorylation motifs
Phosphorylation motifs represent position-specific amino acid patterns around the phosphorylation sites in the set of phosphopeptides. The discovery of phosphorylation motifs is a very valuable work in bioinformatics. Although several algorithms have been proposed to uncover phosphorylation motifs, the problem of efficiently discovering a set of significant motifs with sufficiently high coverage and non-redundancy still remains unsolved. In this paper, we propose an algorithm called C-Motif... -
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Pepgrep
Tool for peptide MS2 pattern matching in MS tandem dataset
pepgrep offers a quick and friendly way to examine MS tandem output data by finding a spectral pattern matching selected peptide sequence. It is database-free command-line utility that uses Peptide-to-MS2 scoring algorithm. The Peptide-to-MS2 pattern matching can accumulate dozens of mass offsets corresponding to a variety of Post-Translational Modifications. Decoy peptide sequences are used with the tested peptide sequence to reduce false-positive results. Read article at: http... -
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JConstraints
Java Framework to implement solutions to solve constraints problems
... of Backjumping algorithms; - A variety of arc-consistency algorithms; - Local search algorithm; - Tabu search algorithm; - Maximize solutions: comming soon; - Minimize solutions: comming soon; The Framework also enables heuristic injections so that the developers can achieve greater performance of algorithms using their own heuristics. Version 1.0: Released! Version 1.1: Coming soon See the tutorial in the Wiki page to learn how to use this Framework. -
Picsart Enterprise Background Removal API for Stunning eCommerce VisualsWith our Remove Background API tool, you can access the transformative capabilities of automation , which will allow you to turn any photo asset into compelling product imagery. With elevated visuals quality on your digital platforms, you can captivate your audience, and therefore achieve higher engagement and sales.
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HRSS
Hybrid Relative Specificity Similarity based on Gene Ontology
This software provides a hybrid GO-based semantic similarity algorithm for evaluating the functional similarity between GO terms or gene products. The software uses the pre-downloaded GO database files and the GO annotation files. It allows the users to set organisms, and evidence codes ignored. The software is composed of five modules, getGODAG, getGOAnno, hrssmatrix, hrsstps and hrsspps. -
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ProximityForest
Efficient Approximate Nearest Neighbors for General Metric Spaces
A proximity forest is a data structure that allows for efficient computation of approximate nearest neighbors of arbitrary data elements in a metric space. See: O'Hara and Draper, "Are You Using the Right Approximate Nearest Neighbor Algorithm?", WACV 2013 (best student paper award). One application of a ProximityForest is given in the following CVPR publication: Stephen O'Hara and Bruce A. Draper, "Scalable Action Recognition with a Subspace Forest," IEEE Conference on Computer Vision... -
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constrainedLATIN
A one-dimensional implementation of a constrained LATIN method
constrainedLATIN illustrates a simple one-dimensional implementation of a constrained LATIN method for modelling quasi-brittle failure. Unlike classical LATIN methods, this novel algorithm can trace snap-back responses. Reference B. Vandoren, K. De Proft, A. Simone, and L. J. Sluys. A novel constrained LArge Time INcrement method for modelling quasi-brittle failure. Computer Methods in Applied Mechanics and Engineering, 265:148-162, 2013 -
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yetris
Customizable Tetris(tm) clone on the terminal
yetris is a customizable Tetris(tm) clone for the terminal. It has some features found on modern adaptations and aims to please both casual players and Tetris(tm) enthusiasts. It has full textual interface. yetris was originally developed in C, now reprogrammed in C++ with ncurses. It runs on pretty much every terminal around here, but it's limited to POSIX systems. -
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Algebraic Numbers
Visualization of the first few algebraic numbers
This is inspired by http://en.wikipedia.org/wiki/File:Algebraicszoom.png with some source code (especially the polynomial generating algorithm!) taken from http://en.wikipedia.org/wiki/User:Stephen_J._Brooks/algebraics/src -
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AS-peak
ASPeak: an abundance sensitive peak detection algorithm for RIP-Seq
Unlike DNA, RNA abundances can vary over several orders of magnitude. Thus identification of RNA-protein binding sites from high throughput sequencing data presents unique challenges. While peak identification in CHIP-Seq data has been extensively explored, there are few bioinformatics tools tailored to peak calling on the analogous datasets for RNA-binding proteins. Here we describe ASPeak, an implementation of an algorithm that we previously applied to detect peaks in Exon Junction Complex... -
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kmul
Constant multiplication routine generator
kmul is a generator of routines for optimized multiplication by an integer constant. In order to calculate a constant integer multiplication, it uses the public domain routines presented in the work: Preston Briggs and Tim Harvey, "Multiplication by integer constants," Technical report, Rice University, July 1994. This technical report implements Bernstein's algorithm documented in: R. Bernstein, "Multiplication by integer constants," Software - Practice and Experience, Vol. 16... -
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PageRank for wikipedia
PageRank algorithm for wikipedia pages on Amazon Elastic MapReduce
• Implemented the project using PageRank algorithm for Wikipedia pages on Amazon Elastic MapReduce. • Designed MapReduce jobs for red links removal, outlink adjacency graph, compute the total number of pages, PageRank calculation, sorting of PageRanks. • To run the project on amazon Elastic MapReduce specify jar location. Pass the directory locations as an argument of input and output respectively. -
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Classical Apriori and Reverse Algorithm
Apriori Algorithm and its Reverse Approach with Comparison
Apriori Algorithm and its Reverse Approach with Comparative Analysis in terms of Execution Time Apriori Algorithm is used in Data Mining for Association Rule Mining -
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PanGP
PanGP is a tool for quickly analyzing bacterial pan-genome profile.
PanGP is a tool for quickly analyzing bacterial pan-genome profile. It has integrated two kinds of sample algorithm, so that it could calculate the pan-genome profile of a population with dozens of or hundreds of strains at extremely low time-cost. At the same time, a user-friendly graphical interface was designed and the image about pan-genome profile could be drawn by PanGP directly. -
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niGA
Heterogenous Multiprocessor Scheduling Using Genetic Algorithms
Implementation of task scheduling using Genetics algorithm for heterogeneous parallel programming -
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SilentEye is a cross-platform application design for an easy use of steganography. It provides a pretty nice interface and an easy integration of new steganography algorithm and cryptography process.
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PythonStatsLab
A collection of useful statistical functions written in Python
... (Riemann sum, Simpson's method, Taylor expansion, etc.) that can be employed in this task, which I hope to add soon. Projected Future Improvements: -Estimation with 2 means -Student's t-distribution -Hart's algorithm for integrating CDF -
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LoveCalculator
A Love Calculator with a Rich User Interface
This is a Love Calculator with a rich user interface and animations made by using JavaFX. This application runs on Windows, Linux and Mac. Java 7 or later is required. Unlike the other Love Calculators found on Internet, this one does not generate random numbers. It uses a popular hand worked algorithm used by most of the school students. The Love Percentage is calculated by the process of listing the frequencies of each letter in the string "<Name1> LOVES <Name2>" and then adding... -
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An easy-to-use simulator for decentralized distributed scheduling in Clusters, Grids, and Cloud ecosystem MaGate 2.0 is now available from github! https://github.com/huangye177/magate
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Sudoku MEA Solver is projet of desktop Sudoku automatic solver aplication written in C++ with using Qt4. It's based on my batchelor thesis project (Multiagent Evolutionar Algorithm for Sudoku).
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Fileprivacy
Fileprivacy easily encrypts your files
... change the algorithm after setting the keylength. It has to be restarted for further use. Because there are no start scripts, yet, you have to start Fileprivacy from console by typing: java -jar Fileprivacy-1.0_<version>.jar ####### ALSO NOTE ####### The author of this software is not responsible for the safety of your data. There is no guarantee that one or more of the implemented algorithms cannot be compromised. -
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Duplicate Files Finder is a cross-platform application for finding and removing duplicate files by deleting, creating hardlinks or creating symbolic links. A special algorithm minimizes the amount of data read from disk, so the program is very fast.
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astronx
simulation of objects in space with classical mechanics
astronx simulates the motion of mass-centres in cartesian space. The mass-centres interact solely through gravity. astronx uses the Bulirsch-Stoer extrapolation algorithm with adaptive stepsize to integrate the newtonian equations of motion. -
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JCryptor
JCryptor is an encrypting tool based on the Caesar-cipher.
JCryptor uses the Caesar-cipher to encrypt keystrokes on-the-fly. It can also be used to decrypt an encrypted text easily. Caesar-cipher is a simple encryption algorithm, developed by Julius Caesar, to encrypt his correspondence with Cicero in the ancient world. Therefore it uses a simple character substitution method to replace a given character by another. A keyshift of thirteen is called ROT13. ROT13 can be decrypted by encrypting it again with ROT13. Even today this simple method is used... -
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HAWK - PDF Text Search Java Project
No more support for this project - TAKE A LOOK AT FALCONSEARCH
No more support for this project - TAKE A LOOK AT FALCONSEARCH "https://sourceforge.net/projects/falcontextsearch/"
