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Showing 1688 open source projects for "reference"
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vtens_ARK_clock1
vtens_ARK_clock1. ARK using GPGPU
vtens_ARK_clock1. ARK Discovering Regulatory Network Topologies Using Ensemble Methods on GPGPUs With Special Reference to the Biological Clock of Neurospora crassa -
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Universe Starter Agent
A starter agent that can solve a number of universe environments
The universe-starter-agent repository is an archived OpenAI codebase designed as a starter reinforcement-learning agent that can interact with and solve tasks in OpenAI’s Universe environment platform. Its purpose is to serve as a baseline or reference implementation so researchers or developers can see how to build agents that operate in real-time, visual environments (e.g., games, browser apps) via pixel observations and keyboard/mouse actions. Under the hood, this starter agent implements a version of the A3C (Asynchronous Advantage Actor-Critic) algorithm, adapted for the specific challenges of Universe environments (e.g., network latency, VNC streaming, asynchronous observations). ... -
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ERMaster is Eclipse plug-in to make ER diagram. Functionally, Import from data base, Making of table definition book on Excel, Image output, DDL output, etc. are being offered.
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FEATnotator is a light weight, fast and easy to use, open source software program that annotates different kinds of next generation analysis data based on known reference genome annotation information. For SNP data, it also predicts the effect of SNPs in the protein coding regions on the codons involved and marks SNPs potentially affecting start and stop codons and splice sites. It also identifies features of user’s interest, such as genes, or biomarkers in the vicinity of the features to be annotated. ...
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DL Book Notation
LaTeX files for the Deep Learning book notation
This repository collects and standardizes mathematical notation, typographic conventions, and symbol definitions used in the Deep Learning Book (by Goodfellow, Bengio & Courville). Its main goal is to provide a canonical reference for notation so that derivative works (papers, lectures, tutorials) can align notation consistently. The content includes LaTeX macros, notation tables (e.g. symbols for vectors, tensors, functions, loss, activation), and cross-references mapping symbols to their conceptual meaning. It also includes scripts or style files to facilitate inclusion in articles, slides, or papers that build on the DL book’s notation. ... -
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ONVIF Export File Player
Player supporting the ONVIF Export File Format
Reference Player Software for authenticated playback of mp4 files. -
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srttiming
a commandline tool for manipulating time values in .SRT subtitle files
...srttiming synchronizes ALL the time labels in the original .srt file according to given PACE and OFFSET values. srttiming can also calculate PACE and OFFSET values from given REFERENCE TIME POINTS. Currently intended for Linux/Unix platforms. -
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zARCHIVES.mythtv30pre-light-Raspbian
"RPI-Distro/pi-gen" fork/rebuild of raspbian current/mythtv devel
NOTE REFERENCE DATES: "pre" releases are fast moving targets , update often for the latest changes/fixes/devwork/etc. Raspberry Pi reference 2018-04-27 Generated using pi-gen, https://github.com/RPi-Distro/pi-gen, 2233762f826460d964daf9e0d6d045ee2fd0bb06, stage4 Firmware: https://github.com/raspberrypi/firmware/tree/5db8e4e1c63178e200d6fbea23ed4a9bf4656658 Kernel: https://github.com/raspberrypi/linux/tree/f70eae405b5d75f7c41ea300b9f790656f99a203 Uname string: Linux version 4.14.34-v7+ (dc4@dc4-XPS13-9333) (gcc version 4.9.3 (crosstool-NG crosstool-ng-1.22.0-88-g8460611)) #1110 SMP Mon Apr 16 15:18:51 BST 2018 -
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PyBitmessage
Reference client for Bitmessage
PyBitmessage is a decentralized, encrypted, and trustless communication protocol that allows users to send messages without relying on central servers or exposing metadata. Built in Python, it provides an alternative to email by using strong cryptography and a distributed peer-to-peer network for anonymity. PyBitmessage operates through deterministic addresses and proof-of-work to mitigate spam. It's a pioneer in secure communication and offers a unique decentralized messaging approach. -
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zARCHIVES.omxplayercamviewsvcmeye-rpi
Raspbian-lite with omxplayercamviewsvc/motioneye
Raspberry Pi reference 2018-04-17 Generated using pi-gen, https://github.com/RPi-Distro/pi-gen, 5df1e969c8bc005c55718d3e03a2bad8b4a300ac, stage2 Firmware: https://github.com/raspberrypi/firmware/tree/ce8652e2c743f02f04cb29f23611cbf13765483b Kernel: https://github.com/raspberrypi/linux/tree/81dda1af754c3af667944af7156bf1c5cdf9beee Uname string: Linux version 4.14.30-v7+ (dc4@dc4-XPS13-9333) (gcc version 4.9.3 (crosstool-NG crosstool-ng-1.22.0-88-g8460611)) #1102 SMP Mon Mar 26 16:45:49 BST 2018 -
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Sinon.JS
Test spies, stubs and mocks for JavaScript
...As of Sinon 10 we stopped maintaining compatibility with legacy browsers. Instead, we focus on compatibility with evergreen browsers, Node.js LTS versions and recent Safari versions. The most up-to-date reference on which runtimes and browsers we support can be found by looking at our compatibility docs. Fake timers are synchronous implementations of setTimeout and friends that Sinon.JS can overwrite the global functions with to allow you to more easily test code using them. A test spy is a function that records arguments, return value, the value of this and exception thrown (if any) for all its calls. ... -
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Intel neon
Intel® Nervana™ reference deep learning framework
neon is Intel's reference deep learning framework committed to best performance on all hardware. Designed for ease of use and extensibility. See the new features in our latest release. We want to highlight that neon v2.0.0+ has been optimized for much better performance on CPUs by enabling Intel Math Kernel Library (MKL). The DNN (Deep Neural Networks) component of MKL that is used by neon is provided free of charge and downloaded automatically as part of the neon installation. ... -
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Koa2 RESTful API
RESTful API Server
This is a lightweight RESTful API Server scaffolding based on Koa2, supporting ES6. Since the Koa version is upgraded to 2.3.0+, in order to match the corresponding dependencies, the Node.js version is required to be greater than or equal to v8.0.0 (v11.13.0 is recommended), and the NPM version is greater than or equal to v5.0.0. It is recommended to use yarn instead of npm. This scaffolding only installs some necessary plug-ins that do not conflict with Koa2 to build a RESTful API Server,... -
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GPSpvt
Reading Position, Velocity, Time from a GARMIN GPS via native USB
...GPSpvt will probably run on most Garmin GPS with USB port, and print out device info. But to get viable PVT data, the GPS must support A800 protocol / D800 datatype. For reference see the document: 'Garmin Device Interface Specification, May 19, 2006, May 19, 2006, Drawing Number: 001-00063-00 Rev. C' (file: Garmin Device Interface Specification (May 19, 2006).pdf). Make sure the kernel module 'garmin_gps' is *NOT* loaded; otherwise USB is blocked! Requires Python Version 3.x (developed on 3.5.2). -
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Pose
Replace any .NET method (including static) with a delegate
Pose allows you to replace any .NET method (including static and non-virtual) with a delegate. It is similar to Microsoft Fakes but unlike it Pose is implemented entirely in managed code (Reflection Emit API). Everything occurs at runtime and in memory, no unmanaged Profiling APIs and no file system pollution with re-written assemblies. Pose is cross-platform and runs anywhere .NET is supported. It targets .NET Standard 2.0 so it can be used across .NET platforms including .NET Framework,... -
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BisSNP
Bisulfite-seq/NOMe-seq SNPs & cytosine methylation caller
...In default threshold 30X data (Phred scale score > 20), it could detect 92.21% heterozygous SNPs with 0.14% false positive rate Cytosine calling is not only based on reference context, so it could detect non-reference cytosine context. Google group for help: http://goo.gl/zL7Nj -
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Schism
A self-hosting Scheme to WebAssembly compiler
...Its architecture demonstrates advanced compiler design techniques such as staged compilation and snapshot-based bootstrapping. The project focuses on leveraging WebAssembly’s experimental capabilities, including reference types and tail calls, to test the limits of language portability and runtime performance. Though no longer actively maintained, Schism remains a valuable example of how high-level languages can be mapped to WebAssembly and offers insights into language implementation. -
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Python Cookbook
Python Cookbook, 3rd edition translation
...Just as Python 3 represents the future, the new "Python Cookbook" version has a brand new change compared to the previous version. First and foremost, this means that this book is a very cutting-edge reference book. All the code in the book was written and tested under Python 3.3 version. We hope this book will guide people to use Python 3 to write new code or upgrade legacy code. -
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idwtree
Assigns orthologs using a phylogenetic tree
Protein BLAST analysis finds all homologs of a protein; however, for many analyses, it is important to identify orthologs in different species (e.g. homologs that derive from the same ancestral sequence). The program idwtree aid in this analysis by assigning 'group' identity in phylogenetic trees containing reference sequences as markers. The standard workflow idwtree was intended to analyze: 1. BLAST protein sequence of interest against organism(s) of interest. 2. Download all significant BLAST hits. 3. Build a multiple sequence alignment of BLAST hits with reference sequences (e.g. with CLUSTAL OMEGA or MAFFT). 4. ... -
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WOFF2
This document documents how to run the compression reference code
woff2 is Google’s reference implementation of the WOFF2 webfont format, the modern, highly compressed container used by browsers to ship OpenType/TrueType fonts efficiently over the network. It integrates specialized transforms for font tables (like glyf/loca and variations data) with Brotli compression to squeeze out as many bytes as possible while preserving exact font fidelity on decode. -
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loadCSS
Load CSS asynchronously
...This is handy for cases where you need to dynamically load CSS from script. The code above will insert a new CSS stylesheet link after the last stylesheet or script that it finds in the page, and the function will return a reference to that link element, should you want to reference it later in your script. -
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DarkForestGo
DarkForest, the Facebook Go engine
...A KGS/online client and match runner make it practical to stage controlled tournaments or continuous rating evaluation. Although later projects (like ELF OpenGo) surpassed it in strength, darkforestGo remains a historically important, clean reference for neural-MCTS Go systems. -
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Grumpy
Grumpy is a Python to Go source code transcompiler and runtime
...Its runtime implements core Python object and execution models, though the API is not compatible with CPython’s C-API, and extension coverage is incomplete compared to CPython. Grumpy was ultimately archived and is read-only, but the repository remains a valuable reference on alternative Python execution strategies and the trade-offs of VM-less designs. Documentation in the repo and wiki outline architecture, limitations, and examples of compiled output. -
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pascal-p2
2nd version of the Pascal-P compiler
...Niklaus Wirth led an effort to gather and reconcile the different sources for the Pascal-P compiler in existence, which were collectively referred to as Pascal-P1.These were then published as part of a porting kit for the compiler. Pascal-P2 is a "Running history project". It is a historical record, but still runs on modern computers. Pascal-P2 exists mainly for historical reference. It was improved at ETH Zurich to become Pascal-P4, and brought to full ISO 7185 standard status as Pascal-P5. You can find all of the Pascal-P versions here in sourceforge: https://sourceforge.net/projects/pascal-s/ https://sourceforge.net/projects/pascal-p2/ https://sourceforge.net/projects/pascalp4/ https://sourceforge.net/projects/pascalp5/ https://sourceforge.net/projects/pascal-p6/ -
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Portable Robotics Eye Vergence Control
Eye movements control portable on different robotic stereo heads
...The project is now available for the iCub platform to work on YARP [https://github.com/stino78/vergence-control/][1] The algorithm works on the top of a distributed representation of binocular disparity supplied by a population of binocular energy-model neural units. The project allows a robust control and adaptive binocular coordination for different robot stereo platforms. Reference publications: Gibaldi, A., Vanegas, M., Canessa, A., & Sabatini, S. P. (2017). A portable bio-inspired architecture for efficient robotic vergence control. International Journal of Computer Vision,. Gibaldi, A., Canessa, A., Chessa, M., Sabatini, S. P., & Solari, F. (2011, October). A neuromorphic control module for real-time vergence eye movements on the iCub robot head. ...
