Search Results for "genetic algorithm php" - Page 3

Showing 234 open source projects for "genetic algorithm php"

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  • 1

    GA-EoC

    GeneticAlgorithm-based search for Heterogeneous Ensemble Combinations

    ...To enhance classification performances, we propose an ensemble of classifiers that combine the classification outputs of base classifiers using the simplest and largely used majority voting approach. Instead of creating the ensemble using all base classifiers, we have implemented a genetic algorithm (GA) to search for the best combination from heterogeneous base classifiers. The classification performances achieved by the proposed method method on the chosen datasets are promising.
    Downloads: 0 This Week
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  • 2

    REDHORSE

    Software suite for the analysis of haploid hybrids using NGS

    ...We therefore designed a software suite called REDHORSE that takes genomic alignments as input, extracts meaningful markers and generates MSAs that are the inputs to existing RD algorithms. In addition, REDHORSE implements a custom RD algorithm that makes use of sequence information and genomic positions to accurately detect crossovers. REDHORSE is portable and platform independent suite that provides efficient analysis of genetic crosses based on NGS data.
    Downloads: 0 This Week
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  • 3
    This software searches the potential energy surface of small to medium size atomic systems for global minima using quantum ab initio techniques. It performs bond rotations and molecule translations and rotations on a Linux cluster with MPI.
    Downloads: 1 This Week
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  • 4
    LDWM: Hash-Based Signatures (draft-mcgrew-hash-sigs-02), PHP implementation of IETF pqcrypto algorithm specification
    Downloads: 0 This Week
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  • 5

    GeneticAlgorithms

    Framework for using the Genetic Algorithms optimization heuristic.

    GeneticAlgorithms is a simple and lightweight framework to implement an optimization heuristic following the Genetic Algorithms model. A genetic algorithm mimics the natural processes of evolution, selection and "survival of the fittest". This framework is intuitive and good integrated with Java 1.5 SDK and later.
    Downloads: 0 This Week
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  • 6

    Java CoreWars Evolver

    A Java based, pMars compatible, CoreWars simulator with GA

    A Java based, pMars compatible, CoreWars simulator with Genetic Algorithm warrior evolver functionality. Java 8 is needed. See [Wiki:Tutorial]
    Downloads: 0 This Week
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  • 7

    gametes

    Generate complex SNP models and heterogeneous datasets

    Genetic Architecture Model Emulator for Testing and Evaluating Software (GAMETES) is an algorithm for the generation of complex single nucleotide polymorphism (SNP) models for simulated association studies. GAMETES is designed to generate epistatic models which we refer to as pure and strict, that constitute the worst-case in terms of detecting disease associations, since such associations may only be observed if all n-loci are included in the disease model.
    Downloads: 10 This Week
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  • 8
    ESTReMo

    ESTReMo

    An evolutionary simulator of transcription regulatory networks

    ESTReMo is a genetic algorithm-based simulator to explore the evolution of transcription factors and their binding motifs on realistic genomic backgrounds.
    Downloads: 0 This Week
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  • 9

    Evolutionary Nursery

    A simple genetic algorithm for numerical optimization

    Evolutionary nursery is a result for my passion for developing genetic algorithms. I implemented this simple GA in 2008. This is especially intended for numerical optimization problems.
    Downloads: 0 This Week
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  • 10

    FamSeq

    Variant calling on the basis of pedigree information

    ...FamSeq accommodates de novo mutations and can perform variant calling at chromosome X. To accommodate variations in data complexity, FamSeq consists of three distinct implementations of the Mendelian genetic model: the Bayesian network algorithm, Elston-Stewart algorithm and Markov chain Monte Carlo algorithm. To make the software efficient and applicable to large families, we parallelized the Bayesian network algorithm that copes with pedigrees with inbreeding loops without losing calculation precision on an NVIDIA® graphics processing unit.
    Downloads: 0 This Week
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  • 11

    PHP Voucher

    PHP Voucher Manager

    PHP Voucher is a simple manager to create, check and execute unique vouchers. It works without SQL database. The generated codes are encrypted with MD5 algorithm and saved in data files (*.dat). Executed vouchers are registered and cannot be used again. Generating codes: makecode.php Checking codes: checkvoucher.php Configuration: config.php Style: main.css
    Downloads: 0 This Week
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  • 12
    GenoCAD
    GenoCAD is a CAD software for synthetic biology. This application provides a web-based tool to design plasmids, artificial gene networks, and other synthetic genetic systems composed of standard genetic parts. It includes a parts management system, a rule-based design tool, and a simulation engine. This project has morphed into a SaaS model. The open source code is no longer maintained.
    Downloads: 0 This Week
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  • 13
    COV2HTML

    COV2HTML

    A visualization and analysis tool of Bacterial NGS data for Biologists

    COV2HTML provides an easy and 'in home' web interface for biologists that allows coverage visualization of the NGS alignment needed for the analysis. It combines two essential processes: (i) MAP2COV, a tool that converts the huge NGS mapping or coverage files into light specific coverage files which contains genetic elements informations. (ii) COV2HTML, a visualization interface allowing a real-time analysis of data with selected criteria. Thus this interface offers a visualization of NGS...
    Downloads: 0 This Week
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  • 14

    NEAT Visualizer SFML

    A NEAT Implementation and Visualization System

    Evolves neural networks using the Neuro-Evolution of Augmenting Topologies (NEAT) technique. A separate visualization system uses another genetic algorithm to evolve images of the otherwise dimensionless networks so their structure can be observed.
    Downloads: 0 This Week
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  • 15

    VariantMaster

    Extract causative variants for monogenic and sporadic genetic diseases

    ...To improve the identification of the variants from HTS, we developed VariantMaster, an original program that accurately and efficiently extracts causative variants in familial and sporadic genetic diseases. The algorithm takes into account predicted variants (SNPs and indels) in affected individuals or tumor samples and utilizes the row (BAM) data to robustly estimate the conditional probability of segregation in a family, as well as the probability of it being de novo or somatic. In familial cases, various modes of inheritance are considered: X-linked, autosomal dominant, and recessive (homozygosity or compound heterozygosity). ...
    Downloads: 0 This Week
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  • 16

    niGA

    Heterogenous Multiprocessor Scheduling Using Genetic Algorithms

    Implementation of task scheduling using Genetics algorithm for heterogeneous parallel programming
    Downloads: 0 This Week
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  • 17

    Evochumps

    Evolving recursive artificial neural networks in a simulation.

    ...It has a built-in evolutionary algorith to let the brains evolve conditoned to selective pressure. The program's interface allows you to manipulate all kinds of parameters of both the simulation, the genetic algorithm, and each particular RNN in real time.
    Downloads: 0 This Week
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  • 18

    PyGAO

    Genetic Algorithm Optimization for Python

    A simple interface for performing genetic algorithm optimization for numerical problems. I am starting with a stripped-down version, where a solution can be described using a single vector of float numbers. Eventually, I will expand to more generic data structures and add multiple-species search options. For the time being, I have no plans of developing a GUI. For now, this is strictly a computational module.
    Downloads: 0 This Week
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  • 19

    ABM-Calibration-SensitivityAnalysis

    Codes and Data for Calibration and Sensitivity Analysis of ABM

    ...<http://jasss.soc.surrey.ac.uk/xx/x/x.html> Methods/Techniques used are: a. Parameter fitting: 1. Full Factorial Design 2. Simple Random Sampling 3. Latin Hypercube Sampling 4. Quasi-Newton Method 5. Simulated Annealing 6. Genetic Algorithm 7. Approximate Bayesian Computation b. Sensitivity Analysis: 1. Local SA 2. Morris Screening 3. DoE 4. Partial (Rank) Correlation Coefficient 5. Standardised (Rank) Regression Coefficient 6. Sobol' 7. eFAST 8. FANOVA Decomposition Have also a look on our other projects: http://www.uni-goettingen.de/de/315075.html
    Downloads: 0 This Week
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  • 20
    ALCHEMY is a genotype calling algorithm for Affymetrix and Illumina products which is not based on clustering methods. Features include explicit handling of reduced heterozygosity due to inbreeding and accurate results with small sample sizes
    Downloads: 0 This Week
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  • 21
    NNBrain

    NNBrain

    A free, open source collection of neural network based AI agents.

    NNBrain is a free and open source collection of artificial intelligence agents. These agents have applications in video games, research, business, and more. The included agents function in both discrete and continuous action and state spaces.
    Downloads: 0 This Week
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  • 22
    OpenAIL

    OpenAIL

    Open Artificial Intelligence Library

    [Open Artificial Intelligence Library]. This library main goal is to provide a tool box to those who want to use algorithm such as neural network or genetics Algorithm and all algorithms that are commonly within the Artificial Intelligence field.
    Downloads: 0 This Week
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  • 23

    AEvolution

    Artificial life game

    Artificial life game using a genetic algorithm in a simple 2D world.
    Downloads: 0 This Week
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  • 24
    J! Secure Password Hashes
    J! Secure Password Hashes provided an easy access to all Joomla! password hash algorithms and the Drupal 7 SHA-512 hashing algorithm. Compatible: Joomla! 2.5.
    Downloads: 0 This Week
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  • 25

    Reactor Breeder

    A Genetic Algorithm for Reactors in StarMade

    This software uses a genetic algorithm to "evolve" reactor designs for Schema's space-simulation game, Star-Made (http://star-made.org/). One of the more unique aspects of the game is that ship power management is not as simple as filling a cube with power generation blocks. This mechanism leads to difficulties in getting maximal power generation out of such reactors.
    Downloads: 0 This Week
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