Search Results for "parallel" - Page 28
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Showing 1344 open source projects for "parallel"
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The Thot toolkit repository has moved to http://daormar.github.io/thot/ Thot is a toolkit for statistical machine translation. The new Thot toolkit includes fully automatic and interactive machine translation, incremental training of statistical models, parallel estimation, ...
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ProC 3.0
smart Workflow Engine
ProC 3.0 is a scientific workflow engine to build, manage and execute workflows (pipelines) in heterogeneous environments, supporting GRID and other means of parallel processing. It includes a data management component (DMC) to transparently access databases for storage of results and automatically adds metadata to track the processing of data products, so that at every time a full processing history is available. The software was developed and used within the ESA Planck satellite mission. -
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Eye candy showing parallel Conway's Life games in the bit planes of the screen, using boolean BitBlt operations. (Independently rediscovered algorithm given already in Smalltalk-80 Blue Book, by the inventors of BitBlt.)
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WebRTCBench
A benchmark for WebRTC implementations
WebRTCBench is a benchmark suite to provide quantitative comparison of WebRTC implementations across different browsers and architectures. It also includes a database interface for storing measurement results. The benchmark was developed at the Parallel Architectures and Systems Lab at the University of California Irvine supported by a generous grant from Intel Corporation. -
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PRADA
PRADA : Pipeline for RNA-Sequencing Data Analysis
Massively parallel sequencing of cDNA reverse transcribed from RNA (RNASeq) provides an accurate estimate of the quantity and composition of mRNAs. To characterize the transcriptome through the analysis of RNA-seq data, we developed PRADA. PRADA focuses on the processing and analysis of gene expression estimates, supervised and unsupervised gene fusion identification, and supervised intragenic deletion identification. -
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openSEQ
NGS compute distro proloaded with pipeline analysis software
...Software included (location - name): path - biobambam path - bwa path - bowtie2 path - bowtie path - cufflinks path - bcftools path - tophat path - scalpel path - samtools path - sra-toolkit path - bamtools path - delly path - delly-parallel path - picard-tools path - fastahack path - twoBitToFa ~/prog/java/ - mutect ~/prog/python/ - platypus ~/prog/java/ - gatk -
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myopentrader
Open-source complex-event based trading engine
...We have started MOT in 2012 and we have been using MOT ever since successfully. The best way of describing MOT is a flexible open-source trading framework. It is built from ground up as a parallel computing engine, which allows to do large scale parallel backtesting. MOT is distributed under the GPL v3 License and is free to use for everyone without warranty. MyOpenTrader.org is not responsible for any of your trading losses and can not be held accountable. Use the framework at your OWN risk. MOT is written purely in Java (1.6++) and has dependencies on a DB as well as a MQ Broker (such as ActiveMQ). -
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The Mooty Tool Kit (MTK) is a feature-rich Bash tool kit that makes it easy for you to perform High Performance Administration (HPA) task in your environment. HPA task include: * Mass-management of computers * Deployment of files * Collection of system data reports * And much, much more The MTK leverages existing Network Operating System infrastructure, so it is very light, flexible, portable and powerful. The kit comes with multiple tools that make mass management simple and...
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fPotencia
Power flow library in C++
...After observing the lack of ready-to-implement libraries for power system analisys, and that the existing ones focus on command line workflow, I decided myself to start a project to fill the gap. Since Power system simulations have started needing to be executed in parallel, the old C-like designs are outdated; modular design is now needed to launch many simulations at the same time based on a base circuit. fPotencia is programmed in C++, but my intention is to bring JAVA, C#, Python and perhaps MATLAB versions of it. All of them in native code and whenever possible with the same modular structure. -
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ALOO
Concurrent OOP with Agents
ALOO is an experimental general-purpose programming language integrating objects and agents as first-class abstractions for building concurrent (asynchronous, reactive, parallel, etc) programs. -
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mapgraph
Massively Parallel Graph processing on GPUs -- now part of Blazegraph
Mapgraph is SYSTAP’s disruptive new technology to exploit the main memory bandwidth advantages of GPUs. The early work was co-developed with the University of Utah SCI Institute and has its pedigree in the UINTAH software running on over 750M cores on the TITAN Super Computer. Today, SYSTAP has commercialized this technology into it’s Blazegraph Accelerator and Blazegraph HPC products. Checkout our options for GPU acceleration of graphs or contact us to learn more: ... -
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User-union is a set of programs for POSIX/Unix/Linux systems that lets you have "union mounts" without special privilege. The result: change requests in one directory are actually performed in a separate parallel directory instead.
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Java OpenBase
Java all purpose Library
A small library with some day to day problemsolving classes. Database, XML, Parallel, Math, String, ... -
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instantFSM
C++ inline state machine library
instantFSM is a header-only C++ state machine library. Its goal is to make state machine declaration and use easy enough that it can be integrated into your projects painlessly. Have a look atp the wiki where you will find a tutorial, samples, and a cheatsheet to get accustomed with instantFSM. The only instantFSM header file is downloadable from the files section or you can check it out from the git repository. -
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STMX
High-performance transactional memory for Common Lisp
...Instead of traditional lock-based programming, one programs with atomic memory transactions: if a memory transaction returns normally it gets committed, if instead it signals an error (Lisp slang for throwing an exception) it is rolled back. Memory transactions can safely run in parallel in different threads, are re-executed from the beginning in case of conflicts or if consistent reads cannot be guaranteed, and effects of a transaction are not visible from other threads until it commits. STMX gives freedom from deadlocks, automatic rollback on failure, and it aims at resolving the tension between granularity and concurrency. -
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Intel(R) CnC
Parallelism without the Pain
...Through its portabilty and composability (with itself and other tools) it provides future-proof scalability. Intel© Concurrent Collections for C++ is a C++ template library for letting C++ programmers implement CnC applications which run in parallel on shared and distributed memory. -
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Parallel draughts
Parallel implementation of game draughts
Parallel implementation of game draughts. The code is well arranged, so the implementation is well prepared for future extensions. -
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LABjs
Loading And Blocking JavaScript
LABjs is a lightweight JavaScript loader focused on speeding up page performance by controlling how and when scripts download and execute. It provides an expressive API to load multiple files in parallel while guaranteeing execution order, so dependent scripts don’t break. By decoupling fetch from execute, it avoids the blocking behavior of traditional tags and helps reduce perceived load time. LABjs embraces a “load groups, then wait” model that makes dependency management clear without a separate build step. It’s designed to work across a wide range of browsers, including older ones, which is why it relies on robust feature detection and time-tested loading techniques. ... -
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FlexDM
Simple, parallel and fault-tolerant data mining using WEKA
FlexDM has moved to http://madiflannery.github.io/FlexDM/ -
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MDcore is an Open-Source library implementing the core functionality of a Molecular Dynamics engine. The engine is inherently multi-threaded and runs efficiently on multi-processor/multi-core shared-memory architectures.
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OpenFlux2 is an extended version of OpenFLUX (https://sourceforge.net/projects/openflux/) - the modern MATLAB-based modelling software for 13C flux analysis (MFA). The following features were implemented in OpenFLUX2, which were not present in original software: integrated support for calculation and analysis of parallel labeling experiments (PLE), extended statistical analysis of parameter estimation results, calculation of fluxes and measurements correlation, structural identifiability analysis and elements of experimental design.
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QZAntics Chug For Windows
Chug allocates and locks all available memory on the system
...Wocka wocka wocka wocka... On a more somber note. It's a GREAT way to stress test real time application processes (ie: Spaceship Two Flight Systems) should an errant parallel process or bad design cause a problem with adjacent processes. -
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Perl System Test
(PEST)
Perl System Test (PEST) is a test harness, written in Perl, for running processes on a distributed testbed via SSH. Test processes are defined in a simple config file for execution on remote hosts, enabling a tester to run tests in serially or in parallel. Processes are as non-blocking and un-buffered as possible. The harness redirects process output to an individual log for each process and logs process metadata. It captures the return code of each remote process and interprets 0 as pass and everything else as fail, enabling it to run tests written in any language. The harness depends on a standard testbed descriptor to facilitate portability across testbeds. ... -
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Puf is a command line web (HTTP) client. It is similar to GNU wget (and has similar options), but has the ability to do many downloads in parallel. Of course, it supports recursive fetching.
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CUSHAW2: Parallel Gapped Read Alignment
One of the leading short-/long-read aligner to large genomes
...Furthermore, our aligner shows good parallel scalability with respect to the number of CPU threads.
