Search Results for "java medical imaging" - Page 2
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Showing 413 open source projects for "java medical imaging"
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MELAGE is a neuroimaging software developed for visualizing and processing medical images, both Ultrasound and Magnetic Resonance Images (MRIs). Specially it has been prepared for neuroimaging of newborns, it is a versatile platform that allows the visualization of many types of medical images. It allows to load two, three and four-dimensional images of both techniques and in the case of 3D images it allows the simultaneous visualization of the three orthogonal planes which facilitates the...
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123VCF
An Intuitive and Efficient Tool for VCF file filtration
123VCF has been developed to make the filtration step of VCF files efficient and more importantly easy to understand. It can be used in the most important step of whole exome/genome sequencing data analysis in the research and also clinical settings. User manual: https://dl.adbioinformatics.net/123VCF/123VCF_Manual.ver2.pdf If you use 123VCF, please cite its paper: Eidi, M., Abdolalizadeh, S., Moeini, S. et al. 123VCF: an intuitive and efficient tool for filtering VCF files. BMC... -
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SDC
SDC facilitates development of dist. systems of medical devices.
OpenSDC is a set of libraries that form a communication framework to facilitate the development of distributed systems of medical devices in high-acuity environments. It is based on the upcoming SDC standard, which is specified by the IEEE in IEEE Std 11073-20702-2016 (Point-of-care medical device communication Part 20702: Medical Devices Communication Profile for Web Services), IEEE Std 11073-10207-2017 (Point-of-care medical device communication Part 10207: Domain Information and Service... -
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Dike-ED
Simulator for medical emergency departments
Discrete-event simulator for medical emergency department resource allocation. -
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plastimatch
Volumetric image processing software
Plastimatch is an open source software for image computation. Our main focus is high-performance volumetric registration of medical images, such as X-ray computed tomography (CT), magnetic resonance imaging (MRI), and positron emission tomography (PET). -
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ImageJ2x
Java Image Processing Program
ImageJ2x is medical image processing program inspired by NIH Image for the Macintosh. It can display, edit, analyze, process, save and print 8-bit, 16-bit and 32-bit images. There can be many image formats including TIFF, GIF, JPEG, BMP, DICOM, PNG, FITS and "raw" and ... Read and supports "stacks" (stack), a series of images that share a single window. The program supports simultaneous that number of windows (images), limited only by available memory. It is multithreaded, so that... -
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OpenVigil
Open pharmacovigilance data extraction, mining and analysis tool
OpenVigil provides a webinterface to analyse pharmacovigilance data, i.e., spontanous or systematic collections of treatments (drugs) and observed adverse events ("drug side effects"). FDA Adverse Event Reporting System (AERS) and other pharmacovigilance data (e.g., Canadian or German) are supported. The OpenVigil web-based analysis tools offer several analysis modes like extraction, filtering, mining of data and analyses via measurements of disproportionality like proportional reporting... -
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Amide's a Medical Image Data Examiner: Amide is a tool for viewing, registering, and analyzing anatomical and functional volumetric medical imaging data sets.
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sRNAWorkbench
The UEA sRNA Workbench
A suite of tools for analysing small RNA (sRNA) data from Next Generation Sequencing devices. Including expression profiling of known mirco RNA (miRNA), identification of novel miRNA in deep-sequencing data and identification of other interesting landmarks within high-throughput genetic data -
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NFFT
The official NFFT library repository
NFFT is a software library, written in C, for computing non-equispaced fast Fourier transforms and related variations. -
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KRYSTAL Document Management System
easy to use, powerful and completely free document management software
Primeleaf Consulting's KRYSTAL Document Management and Imaging Software Systems enables organizations and individuals to Scan, Index, Capture, Retrieve, Manage, Control and Distribute critical business document safely and securely. Our document management software systems, replaces paper-based processes with electronic procedures, eliminating the printing, posting and manual filing of paper documents and thus it will drive significant cost savings across your organization. Please visit... -
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Beasties
Defeat all the beasties to claim victory!
Beasties is an OS-independent game written in Java (as of ver2.0.0, prior versions written in Python). The object is to defeat a number of monsters without dying. You have a knife, a gun, extra ammo, and a few medical supplies to help you -
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OpenVCT
The Open-Source Virtual Clinical Trial Project
The OpenVCT project is designed to provide a common platform for performing Virtual Clinical Trials of medical imaging. OpenVCT provides tools for simulation of patient accrual and reader studies of medical imaging devices, simulating by simulating cohorts of patients and readers. OpenVCT uses common data standards, such as DICOM, to ensure inter-compatibility. -
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iPath is providing an free and open plattform for "case based collaboration", especially designed for medical applications (telemedicine, etc). The iPath-Server package provides a sort of medical BBS to discuss/consult cases online. Additional modules
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medical image analysis
Libraries and command line tools for medical image processing.
This software provides libraries and command line tools for the processing and analysis of gray scale medical images. -
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The Development System for Auditory Modelling (DSAM) is a computational library designed specifically for producing simulations of the auditory system. It brings together many established auditory models within a flexible programming platform.
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ICD 10 Disease Viewer
Simplifies viewing of ICD 10 codes and descriptions by medical workers
Helps medical personnel search and become familiar with ICD 10 disease codes and descriptions -
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JavaSeis.org: Java based software for processing and storing petroleum industry seismic data.
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MedRecReader
Convert Tricare PDF table into MS Excel
Medical Record Reader (MedRecReader) is a tool designed to simplify coping Tricare medical history from a PDF Table to a manageable format such as a Microsoft Excel table. -
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OpenBoxes
OpenBoxes is an open-source supply chain management system.
OpenBoxes is an open-source inventory and supply chain management system. It is designed to manage the flow of products between warehouses, and the issue of stock from these warehouses to hospital wards and dispensaries. It could also be used to manage stock at dispensaries, but would likely not be used to track patient-level transactions (e.g. administration and dispensing). It is also not intended to manage durable medical equipment, nor to provide detailed information about vendors. -
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HL7 Inspector
HL7 Inspector is a tool for managing HL7 messages
The HL7 Inspector project has moved to Bitbucket. https://bitbucket.org/crambow/hl7inspector All new releases can be found there. The web-based version can still be found at www.hl7inspector.com -
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DICOM Confidential
An open source Java DICOM de-identification toolkit
DICOM Confidential project develops an open source DICOM (Digital Imaging and Communications in Medicine) de-identification toolkit that provides the necessary flexibility to account for different de-identification requirements. -
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PPIXpress
specific protein interaction networks from transcript expression
Although protein-protein interaction networks are an ubiquitous component of modern systems biology, comparatively few efforts have been made to tailor their topology to the actual cellular condition under study. Since a simple reduction of the networks to the subset of expressed genes only scratches the surface of higher organisms’ regulatory capabilities, we propose the advanced method PPIXpress that allows to exploit expression data at the transcript-level and is thus able to also reveal... -
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NiftyNet
An open-source convolutional neural networks platform for research
...Adapt existing networks to your imaging data. Quickly build new solutions to your own image analysis problems. NiftyNet currently supports medical image segmentation and generative adversarial networks. NiftyNet is not intended for clinical use. -
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toothache
A conversion utility from proprietary TIF exams to DICOM standard
This application is able to convert TIF radiology exams to DICOM objects
