Search Results for "fold" - Page 2
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Showing 50 open source projects for "fold"
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Error to trace to log to deploy. One click. No SSH.AppSignal links every error to the trace, the trace to the log, the log to the deploy that shipped it.
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Stop Cyber Threats with VM-Series Next-Gen Firewall on AzureGain integrated visibility across all traffic in a single pass. Deploy Palo Alto Networks VM-Series to determine application identity and content while automating security policy updates via rich APIs.
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...The proposed segmentation procedure yields the spots median intensity values for the microarray images recorded from Cy3 and Cy5 fluorescent dyes. Based on the fold change factor, the differentially expressed genes were determined. Both images with single spot groups and multiple spot groups (372 and 324 spots/group) can be processed. Example of such images were taken from the GEO and SMD databases. e.g., GSM102718 - GEO experiment for single spot group.
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DE-HEoC
DE-based Weight Optimisation for Heterogeneous Ensemble
We propose the use of Differential Evolution algorithm for the weight adjustment of base classifiers used in weighted voting heterogeneous ensemble of classifier. Average Matthews Correlation Coefficient (MCC) score, calculated over 10-fold cross-validation, has been used as the measure of quality of an ensemble. DE/rand/1/bin algorithm has been utilised to maximize the average MCC score calculated using 10-fold cross-validation on training dataset. The voting weights of base classifiers are optimized for the heterogeneous ensemble of classifiers aiming to attain better generalization performances on testing datasets. -
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Editor.md
The open source embeddable online markdown editor (component)
...You can enable HTML tags decode, TeX, Flowchart, sequence diagram, Emoji, FontAwesome, task lists. You can also enable image upload, [TOCM], search replace features, code fold, etc. Combine multiple JS module files used by CodeMirror to greatly reduce HTTP requests and speed up downloading. In addition, when using Require.js, because of CodeMirror's strict module dependency restrictions, the merged module files cannot be used, and multiple module files are still dynamically loaded. Newly added images, links, anchor links, code blocks, pre-formatted text and other operations pop-up dialog layers and examples. -
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Vim Markdown
Markdown Vim Mode
This is a Vim syntax file for the Markdown text-to-HTML conversion tool. Syntax highlighting, matching rules and mappings for the original Markdown and extensions. Folding is enabled for headers by default. Options are available to disable folding or change folding style. Concealing is set for some syntax such as bold, italic, code block and link. Concealing lets you conceal text with other text. The actual source text is not modified. If you put your cursor on the concealed line, the... -
Ship Agents FasterGemini Enterprise Agent Platform lets you rapidly build, scale, govern and optimize production-ready agents grounded in your organization's data. The platform enables developers to build custom or pre-built agents for virtually any use case. New customers get $300 in free credits.
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PlaTec
Plate Tectonics simulator
PlaTec is a 2D terrain generator that uses a simplified model of plate tectonics to produce realistic heightmaps in real time. The simulator starts with a flat fractal map and splits it randomly into plates. Plates are moved around the map. If continents of two plates collide, they fold creating mountain belts. If oceanic crust of one plate collides with another plate, subduction occurs resulting in coastal mountain ranges or island chains. This project is part of my Bachelor of Engineering thesis in Metropolia University of Applied Sciences, Helsinki, Finland. The thesis is freely downloadable from http://urn.fi/URN:NBN:fi:amk-201204023993 . ... -
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CURIPS is a dictionary based lossless compression scheme for identifying the long range repetitions in large protein data set so as to reduce the memory foot print. CURIPS reported a 23 fold reduction in memory size for influenza dataset.
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mahasona
Mahasona engine is an open source game engine.
...Find the wiki page for howto's Ubuntu Video http://www.youtube.com/watch?v=y5OSCTb_aNA Windows Video http://www.youtube.com/watch?v=dS_YwzyCjn4 Projects using Mahasona Engine- 1. Snap-n-fold: origami pattern generation based real-life object structure http://dl.acm.org/citation.cfm?id=2223800 -
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WigMaker
make wiggle file from bed file for ChIP-seq samples
This application takes bed file(or gzip bed, with .gz extension) as input, it creats a single file or a fold like 'wigs for xxx' in which the chromosome separated wiggle files will be saved. Users can set the wigextend value and step value for the output wig files. By default, they are 200 and 25. The application requires a lot of memory (about 2GB) -
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This vim plugin provides the ability to convert current file to colored HTML, BBcode, (in future) LaTeX or whatever you have written specification for.
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99.99% Uptime for MySQL and PostgreSQL DatabasesCloud SQL Enterprise Plus delivers near-zero downtime with 35 days of point-in-time recovery. Supports MySQL, PostgreSQL, and SQL Server.
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MICA-aligner
Next-generation sequencing short reads aligner based on Intel® MIC
...Experiments on aligning 150bp paired-end reads show that MICA using one MIC board is ~4.85 times faster than the CPU-(multi-core)-based BWA-MEM and about the same speed as the GPU-based SOAP3-dp. Furthermore, MICA’s simplicity allows very efficient scale-up when multiple MIC boards are used in a node (3 cards gives a 14-fold speedup over 6-core BWA-MEM). -
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oriDomi
Fold up DOM elements like paper
oriDomi is a JavaScript library that visually "folds" DOM elements like paper, creating origami-style transitions using CSS transforms and JavaScript. Use your mouse or touch to manipulate the images on the website, or press the fold button to see a random effect. Create an OriDomi instance by passing your target element to the constructor. When creating a new OriDomi composition, you can pass a map of options as the second argument. -
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Digital Expression on the Web
DEW is a platform that allows users to explore RNA-Seq data
...For each gene the user provides, DEW computes coverage descriptive statistics (RPKM, FKMP and total, mean and median corrected counts), expression profiles (normalized as R/FPKM and trimmed mean of fold change). DEW allows users to explore the data by providing interactive graphs. -
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qPMerge
phospho-peptide merge tools for Galaxy
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traph
A tool for transcript identification and quantification with RNA-Seq
Traph is a novel tool for transcript identification and quantification with RNA-Seq data, based on minimum-cost flows. Our method has a two-fold advantage: on the one hand, it translates the problem as an established one in the field of network flows, which can be solved in polynomial time, with different existing solvers; on the other hand, it is general enough to encompass many of the previous proposals under the least sum of squares model. -
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DNAcompact
Genome compression algorithm with/without reference (Linux/Windows)
...The proposed method without a reference led to bit rates of 1.720 and 1.838 bits per base for bacteria and yeast, which are approximately 3.7% and 2.6% better than the state-of-the-art algorithm. Regarding performance with reference, we tested on the first Korean personal genome sequence data set, and the proposed method demonstrated a 189-fold compression rate, reducing the raw file size from 2986.8 MB to 15.8 MB. -
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Into The Unknown
This is a game of a robot that crashes on an alien world...
An Earth robot from the middle ages crash-lands on an alien world, a world that has been overrun by the Seen. Now our hero must stop the seen before it's to late! Now in story fold 1! -
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GEAX is a Java application used to visualize and analyze cross-species gene expression microarray data.The program allows comparisons based on fold-change, p-value, quantile matching, or a combination of criteria.
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This project is a helper, that created pagin index printer for duplex printers which doesn't have this formation. With this it's possible to print and fold documents in a book format
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JOrigami is a collection of algorithms for computational origami. Some algorithms studied by computational origami does not have an implementation. JOrigami solves the famous and funny fold-and-cut using Demaine's disk packing implementation.
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ea-fold is a platform to perform protein folding simulations by means of evolutionary algorithms. The program implements a parallelized distributed evolutionary algorithms and a flexible force field.
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GNU-Darwin aims to be the most free software distribution. Our mission is two-fold: Focus on projects that leverage our unique combination of Darwin and GNU, and help users to enjoy the benefits of software freedom. Digital liberties, and in general.
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Similar to Robert Lang's TreeMaker software, this program will figure out how to fold a square piece of paper such that the inputted shape can be cut with just one cut. See http://theory.lcs.mit.edu/~edemaine/foldcut/ for details.
