Search Results for "graphs"
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Showing 19 open source projects for "graphs"
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plotly.py
The interactive graphing library for Python
plotly.py is a browser-based, open source graphing library for Python that lets you create beautiful, interactive, publication-quality graphs. Built on top of plotly.js, it is a high-level, declarative charting library that ships with more than 30 chart types. Everything from statistical charts and scientific charts, through to maps, 3D graphs and animations, plotly.py lets you create them all. Graphs made with plotly.py can be viewed in Jupyter notebooks, standalone HTML files, or hosted online using Chart Studio Cloud. -
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PyTorch Geometric
Geometric deep learning extension library for PyTorch
It consists of various methods for deep learning on graphs and other irregular structures, also known as geometric deep learning, from a variety of published papers. In addition, it consists of an easy-to-use mini-batch loader for many small and single giant graphs, a large number of common benchmark datasets (based on simple interfaces to create your own), and helpful transforms, both for learning on arbitrary graphs as well as on 3D meshes or point clouds. -
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PyG
Graph Neural Network Library for PyTorch
PyG (PyTorch Geometric) is a library built upon PyTorch to easily write and train Graph Neural Networks (GNNs) for a wide range of applications related to structured data. It consists of various methods for deep learning on graphs and other irregular structures, also known as geometric deep learning, from a variety of published papers. In addition, it consists of easy-to-use mini-batch loaders for operating on many small and single giant graphs, multi GPU-support, DataPipe support, distributed graph learning via Quiver, a large number of common benchmark datasets (based on simple interfaces to create your own), the GraphGym experiment manager, and helpful transforms, both for learning on arbitrary graphs as well as on 3D meshes or point clouds. ... -
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patent-disclosure-skill
Point excavation and submission book
...A separate reading mode turns patent numbers, PDFs, or full text into plain-language notes with claim structure, terminology, and supporting context. Obsidian integration can store the results as linked notes, canvases, and knowledge graphs for ongoing research. -
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Writer Framework
No-code in the front, Python in the back. An open-source framework
...It follows a hybrid approach where user interfaces are created using a drag-and-drop editor while business logic is implemented in Python, allowing teams to balance speed and flexibility without sacrificing control. The framework is particularly focused on AI use cases, enabling developers to integrate large language models, knowledge graphs, and custom machine learning workflows into user-facing applications. Its architecture enforces a clear separation of concerns between frontend and backend, which improves maintainability and scalability as applications grow in complexity. The system is designed to support rapid prototyping, enabling developers to iterate on UI and backend logic independently and deploy changes quickly. -
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Graph Notebook
Library extending Jupyter notebooks to integrate with Apache TinkerPop
...Using this open-source Python package, you can connect to any graph database that supports the Apache TinkerPop, openCypher or the RDF SPARQL graph models. These databases could be running locally on your desktop or in the cloud. Graph databases can be used to explore a variety of use cases including knowledge graphs and identity graphs. This project includes many examples of Jupyter notebooks. It is recommended to explore them. All of the commands and features supported by graph notebook are explained in detail with examples within the sample notebooks. You can find them here. As this project has evolved, many new features have been added. If you are already familiar with graph-notebook but want a quick summary of new features added, a good place to start is the Air-Routes notebooks in the 02-Visualization folder. -
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TensorFlow
TensorFlow is an open source library for machine learning
...The platform can be easily deployed on multiple CPUs, GPUs and Google's proprietary chip, the tensor processing unit (TPU). TensorFlow expresses its computations as dataflow graphs, with each node in the graph representing an operation. Nodes take tensors—multidimensional arrays—as input and produce tensors as output. The framework allows for these algorithms to be run in C++ for better performance, while the multiple levels of APIs let the user determine how high or low they wish the level of abstraction to be in the models produced. ... -
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Penzai
A JAX research toolkit to build, edit, & visualize neural networks
Penzai, developed by Google DeepMind, is a JAX-based library for representing, visualizing, and manipulating neural network models as functional pytree data structures. It is designed to make machine learning research more interpretable and interactive, particularly for tasks like model surgery, ablation studies, architecture debugging, and interpretability research. Unlike conventional neural network libraries, Penzai exposes the full internal structure of models, enabling fine-grained... -
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fvcore
Collection of common code shared among different research projects
...Its common modules include timers, logging, checkpoints, registry patterns, and configuration helpers that reduce boilerplate in research code. A standout capability is FLOP and activation counting, which analyzes arbitrary PyTorch graphs to report cost by operator and by module for precise profiling. The file I/O layer (PathManager) abstracts local/remote storage so the same code can read from disks, cloud buckets, or HTTP endpoints. Because it is small, stable, and well-tested, fvcore is frequently imported by projects like Detectron2 and PyTorchVideo to avoid duplicating infrastructure and to keep research repos. -
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DGL
Python package built to ease deep learning on graph
Build your models with PyTorch, TensorFlow or Apache MXNet. Fast and memory-efficient message passing primitives for training Graph Neural Networks. Scale to giant graphs via multi-GPU acceleration and distributed training infrastructure. DGL empowers a variety of domain-specific projects including DGL-KE for learning large-scale knowledge graph embeddings, DGL-LifeSci for bioinformatics and cheminformatics, and many others. We are keen to bringing graphs closer to deep learning researchers. We want to make it easy to implement graph neural networks model family. ... -
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Theseus
A library for differentiable nonlinear optimization
Theseus is a library for differentiable nonlinear optimization that lets you embed solvers like Gauss-Newton or Levenberg–Marquardt inside PyTorch models. Problems are expressed as factor graphs with variables on manifolds (e.g., SE(3), SO(3)), so classical robotics and vision tasks—bundle adjustment, pose graph optimization, hand–eye calibration—can be written succinctly and solved efficiently. Because solves are differentiable, you can backpropagate through optimization to learn cost weights, feature extractors, or initialization networks end-to-end. ... -
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DIG
A library for graph deep learning research
The key difference with current graph deep learning libraries, such as PyTorch Geometric (PyG) and Deep Graph Library (DGL), is that, while PyG and DGL support basic graph deep learning operations, DIG provides a unified testbed for higher level, research-oriented graph deep learning tasks, such as graph generation, self-supervised learning, explainability, 3D graphs, and graph out-of-distribution. If you are working or plan to work on research in graph deep learning, DIG enables you to develop your own methods within our extensible framework, and compare with current baseline methods using common datasets and evaluation metrics without extra efforts. It includes unified implementations of data interfaces, common algorithms, and evaluation metrics for several advanced tasks. ... -
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Jraph
A Graph Neural Network Library in Jax
...It provides an efficient and flexible framework for representing, manipulating, and training models on graph-structured data. The core of Jraph is the GraphsTuple data structure, which enables users to define graphs with arbitrary node, edge, and global attributes, and to batch variable-sized graphs efficiently for JAX’s just-in-time compilation. The library includes a comprehensive set of utilities for batching, padding, masking, and partitioning graph data, making it ideal for distributed and large-scale GNN experiments. Jraph also comes with a model zoo—a collection of forkable reference implementations of common message-passing GNN architectures, such as Graph Networks, Graph Convolutional Networks, and Graph Attention Networks. -
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Whisper Library
Whisper is a file-based time-series database format for Graphite
Whisper is one of three components within the Graphite project. Whisper is a fixed-size database, similar in design and purpose to RRD (round-robin-database). It provides fast, reliable storage of numeric data over time. Whisper allows for higher resolution (seconds per point) of recent data to degrade into lower resolutions for long-term retention of historical data. Copies data from src in dst, if missing. Unlike whisper-merge, don't overwrite data that's already present in the target... -
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algo
50 Code Implementations You Must Know About Data Structures
...It organizes roughly fifty core exercises by topic rather than presenting a single reusable software library. The material covers arrays, linked lists, stacks, queues, recursion, sorting, binary search, hash tables, strings, trees, heaps, and graphs. More advanced examples address backtracking, divide-and-conquer methods, dynamic programming, shortest paths, topological sorting, caches, and priority queues. Solutions are available across numerous languages, including C, C++, Java, Go, Python, JavaScript, Rust, Swift, Kotlin, and TypeScript. This multilingual layout helps learners compare syntax and implementation choices while studying the same concepts. ... -
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gradslam
gradslam is an open source differentiable dense SLAM library
...However, learning representations for SLAM has been an open question, because traditional SLAM systems are not end-to-end differentiable. In this work, we present gradSLAM, a differentiable computational graph take on SLAM. Leveraging the automatic differentiation capabilities of computational graphs, gradSLAM enables the design of SLAM systems that allow for gradient-based learning across each of their components, or the system as a whole. -
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Graph Nets library
Build Graph Nets in Tensorflow
Graph Nets, developed by Google DeepMind, is a Python library designed for constructing and training graph neural networks (GNNs) using TensorFlow and Sonnet. It provides a high-level, flexible framework for building neural architectures that operate directly on graph-structured data. A graph network takes graphs as inputs, consisting of edges, nodes, and global attributes, and produces updated graphs with modified feature representations at each level. This library implements the foundational ideas from DeepMind’s paper “Relational Inductive Biases, Deep Learning, and Graph Networks”, offering tools to explore relational reasoning and message-passing neural networks. ... -
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ComplexEventExtraction
Expression pattern collection of Chinese compound event extraction
...It defines patterns for causal, conditional, sequential, contrastive, and parallel event structures. The system uses explicit connective words and phrase combinations to split text into linked event pairs. Extracted results can support event graphs that represent how situations develop, conflict, or depend on one another. The repository catalogs hundreds of linguistic patterns and demonstrates them on a large Chinese news corpus. It also discusses several event representations, including clauses, token sequences, and syntactic phrases. The project is intended as a research reference for event extraction, knowledge modeling, forecasting, and language-resource development. -
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node2vec
Learn continuous vector embeddings for nodes in a graph using biased R
...The algorithm is designed to learn continuous vector representations of nodes in a graph by simulating biased random walks and applying skip-gram models from natural language processing. These embeddings capture community structure as well as structural equivalence, enabling machine learning on graphs for tasks such as classification, clustering, and link prediction. The repository contains reference code accompanying the research paper node2vec: Scalable Feature Learning for Networks (KDD 2016). It allows researchers and practitioners to apply node2vec to various graph datasets and evaluate embedding quality on downstream tasks. ...
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