Search Results for "open source laboratory lims"
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Showing 65 open source projects for "open source laboratory lims"
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Open Hospital
Open Hospital - Hospital Information System
Announcement: Since version 1.9.0, codebase is moved to GitHub https://github.com/informatici/ Click download button above for the latest release (GitHub mirror). Previous versions and different architectures under "Files" section. This application is the first of a series of software products that ISF[1] has developed to support the management and the activities of the St. Luke Hospital in Angal (Uganda). After the successful installation and use, the St. Luke Hospital is the first of... -
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Virtual Laboratory Environment
A multi-modeling and simulation environment to study complex systems
VLE is a multi-modeling and simulation environment to study complex dynamic systems. VLE is based on the discrete event specification DEVS. and it implements the DSDE formalism (A merge of Dynamic Structure DEVS, DSDEVS, with Parallel DEVS, PDEVS). VLE provides a complete set of C++ libraries, called VFL (VLE Foundation Libraries), to develop DEVS models, to gets results of simulations, to launch simulation on cluster. The models can be developed with the DEVS formalism or with the classical... -
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GMOL
A tool for 3D genome structure visualization
GMOL is an application designed to visualize genome structure in 3D. It allows users to view the genome structure at multiple scales, including: global, chromosome, loci, fiber, nucleosome, and nucleotide. This software was built upon the pre-existing Jmol package by Prof. Cheng's group. The software is developed in Prof. Jianlin Cheng's Bioinformatics, Data Mining and Machine Learning Laboratory in the Computer Science Department at the University of Missouri - Columbia, USA. The project... -
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CitLab
Combinatorial Interaction Testing Laboratory
Although the research community around combinatorial interaction testing has been very active for several years, it has failed to find common solutions on some issues. First of all, there is not a common abstract nor concrete language to express combinatorial problems. Combinatorial testing generator tools are strongly decoupled making difficult their interoperability and the exchange of models and data. In this project, we propose an abstract and concrete specific language for combinatorial... -
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Elexis Praxisprogramm
An Eclipse RCP program for all aspects of a (Swiss) medical practice
An Eclipse RCP program for all aspects of a medical practice: electronic medical record (EMR), laboratory findings etc., as well as accounting, billing (swiss TARMED-System, other systems to be developped) and other daily work. A fully functional version may be downloaded via http://download.elexis.info/3.1.0. Users may optionally include a demo database to have a playground for experiments. See also http://wiki.elexis.info/Installation_Elexis_3.0_OpenSource Elexis 3.1.0 was released... -
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This project proposes a virtual laboratory for social scientists interested in the modelling, analysis and behavioral simulation of power relationships within organizations and more generally in systems of collective action. This software is grounded on the works lead by Sibertin-Blanc and Roggero on the formalization of the Sociology of Organised Action [Crozier and Freidberg]. Visit the homepage of the project on soclabproject.wordpress.com for tutorials, examples and further...
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Storekeeper-Inventory Management System
Inventory Management System in JavaFX - Alpha -0.5 Release
You need java 1.8.0_45 or later to run this application. Successfully Tested on : Linux Mint/Ubuntu and Windows 8.1. Storekeeper is a small inventory management system. Planed for use in small shop to chain shop or Library to Laboratory. This application still in Alpha or Testing Version. I will fix bug and add more feature by your requirement (if i get much request). Storekeeper run with MySql DBMS server. So, Install Java 8u45 or latter and install MySql to Operate Storekeeper.... -
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ThéMA libs
Commons and utils Java classes used in ThéMA projects
This project contains 7 Java libraries developped in ThéMA laboratory : - common - data - parallel - drawshape - graph - network - msca -
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Open Cezeri Library
Effective Linear Algebra and Computer Vision Library with JAVA
OCL stands for Open Cezeri Library (yet another linear algebra and matrix library). This library provides rapid coding as matlab ease of use. To learn for library please try to use test examples at OpenCezeriLibrary\test\test. It is originally developed at el-cezeri laboratory of Siirt University, in order to establish generic framework of reusable components and software tools for machine vision, machine learning, AI and robotic applications. -
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OHP-M2M (Open Healthcare Machine to Machine) PLATFORM What is this? OHP-M2M Platform is an open source implementation of the international healthcare standards to develop IoT healthcare service. It is based on oneM2M and ISO/IEEE 11073 PHD standard. The platform was initiated by Advanced Information Network (AIN) Laboratory in Kyungpook National University, Korea.
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SITools2 is a new CNES generic tool performed by a joint effort between CNES and scientific laboratories. The aim of SITools is to provide a self-manageable data access layer deployed on already existing scientific laboratory databases.
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adLIMS
adLIMS: a Laboratory Information Management System with ADempiere
Many biological laboratories dealing with genomic samples are facing the problem of sample tracking, both for pure laboratory management and efficiency, and for internal policies, such as Good Laboratory Practices (GLP). Our laboratory exploits PCR techniques and next-generation sequencing (NGS) methods, to perform high-throughput integration site monitoring in different clinical trials and scientific projects, based on the delivery of therapeutic genes by viral vectors integrating into the... -
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Debian Unstable/testing alpha.
Pre-Alpha Console distro for high performance Linux computing.
Basic Debian INTEL/AMD HPC console/desktop multi purpose. Linux for software devs/QA and thin laboratory clusters. MIC hardware, NUMA and live network memory and full IPv6 are supported. Final alpha release features: ======== * Usb image * General debian repos * VM optimizations * Hugepages by default * CGROUPs optimized by default * ALSA * Latest Debugging / Baremetal kernels * Full Haswell and MIC support in test * Full optimized python support * Full... -
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Proteus
Proteus is an interactive Laboratory Journal for Gel-based Proteomics
Proteus is an interactive Laboratory Journal for Gel-based Proteomics. It features integration with the Delta2D software for peak import and annotation export. -
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LIMS-A
Laboratory Information Management System with Complete Lab. Automation
Laboratory Information Management System with Complete Laboratory Automation. This Project is created by Fatih University Computer Engineering Students .. Hasan SARMAN Hamadou Doudoun Niangadou Feugang Kemegni Fabrice it helps to automate complete lab system. its originally created to use on a R&D lab. if you wish you can use it on every kind of labs. it comes with Client Server based Access control Mechanism which cordinate access control with registered projects. -
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The LabLog is a free tool to document projects running in a lab and to manage experimentally obtained data and its metadata. LabLog interfaces to a mySQL database that stores this information. Allows easy searching and retrieval of once recorded data.
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SAHARA Labs
Enables the development of remote labs.
SAHARA Labs provides a generic framework for setting up a heterogeneous remote laboratory of physical apparatuses containing many labs of many types. SAHARA Labs is now developed on the following Github projects: * Scheduling Server - https://github.com/mdiponio/sahara-labs-scheduling-server * Rig Client - https://github.com/mdiponio/sahara-labs-rig-client * Rig Client Commons - https://github.com/mdiponio/sahara-labs-rig-client-commons * Web Interface -... -
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SipnLab
Signal Interpreted Petri Net Laboratory
SipnLab (Signal Interpreted Petri Net Laboratory) creates SIPN and generate AWL-Code for SPS. This tool is based on open source Project "Pipe 2.5". Version 1.1 of SipnLab integraded a Sipn to Ardunio translater and several bugfixes. -
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RODS (Real-time Outbreak and Disease Surveillance) is a real-time computer-based public health surveillance system initially developed at the RODS Laboratory, University of Pittsburgh for the early detection of disease outbreaks .
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SeqWare has moved to GitHub, see https://github.com/SeqWare SeqWare is a project to create a tool set to work with next generation genome sequencers (SOLiD & Illumina). It includes a LIMS, Pipeline, and Query Engine. Check out the wiki link below to see documentation. You can get the source from the Develop link.
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A web based, Java system to display the laboratory results, medicines, letters and treatments for patients.
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Onco-STS
A web-based Laboratory Information Management System
Onco-STS is a web-based Laboratory Information Management System for sample and analysis tracking in oncogenomic experiments. The systematic sequencing and analysis of tumour samples, as well other oncogenomic experiments, necessitates the tracking of relevant sample information throughout the investigative process. These meta-data of the sequencing and analysis procedures include information about the samples and projects as well as the sequencing centers, platforms, data locations,... -
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Bayesian Network tools in Java (BNJ) is an open-source suite of software tools for research and development using graphical models of probability. It is published by the Kansas State University Laboratory for Knowledge Discovery in Databases (KDD).
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HIVCD
Informatics tool for contamination screening in the HIV sequencing lab
HIVCD is an informatics tool developed to identify patient sequences that are too similar to happen by chance alone. Highly similar sequences are likely to occur from contamination or other situations like geographic linkage. Full details can be found in our paper titled "Application of a new informatics tool for contamination screening in the HIV sequencing laboratory" The code provided is a simple user interface to the underlying algorithm. We provide it as a convenience but it comes...
