Search Results for "file identification"
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Showing 23 open source projects for "file identification"
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miRDeep*
MiRDeep*
Please cite: An, J., Lai, J., Lehman, M.L. and Nelson, C.C. (2013) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acids Res, 41, 727-737. We will create index for you if you tell us your interested species (j.an@qut.edu.au). download command line version "MDS_command_line_Vxx.zip" clicking "Browse All Files" please find miRPlant in sourceforge for plant miRNA prediction. -
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mirplant
miRPlant: An Integrated Tool for Identification of Plant miRNA
please cite: An J, Lai J, Sajjanhar A, Lehman ML, Nelson CC: miRPlant: an integrated tool for identification of plant miRNA from RNA sequencing data. BMC bioinformatics 2014, 15(1):275. We will create index for you if you tell us your interested plants (j.an@qut.edu.au). -
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JLibModbus - Java Modbus Library
A modbus library implemented in Java.
...The library supports the most popular communication libraries (jssc, rxtx, jSerialComm, purejavacomm, java comm api); Maven dependency: <dependency> <groupId>com.intelligt.modbus</groupId> <artifactId>jlibmodbus</artifactId> <version>1.2.9.7</version> </dependency> Implemented MODBUS functions: 0x01 Read Coils 0x02 Read Discrete Inputs 0x03 Read Holding Registers 0x04 Read Input Registers 0x05 Write Single Coil 0x06 Write Single Register 0x07 Read Exception Status 0x08 Diagnostics 0x0B Get Comm Event Counter 0x0C Get Comm Event Log 0x0F Write Multiple Coils 0x10 Write Multiple Registers 0x11 Report Slave Id 0x14 Read File Record 0x15 Write File Record 0x16 Mask Write Register 0x17 Read Write Multiple Registers 0x18 Read Fifo Queue 0x2B Encapsulated Interface Transport (Read Device Identification interface) -
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OpenChrom is a tool for gas chromatography and mass spectrometry. The focus is to handle data files from different GC/MS and GC/FID systems and vendors. Its functionality and algorithms can be extended using a flexible plugin approach, based on Eclipse RCP.
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JHOVE
File validation and characterization
JHOVE provides functions to perform format-specific identification, validation, and characterization of digital objects. JHOVE should not be confused with JHOVE2, a product with similar aims but a completely separate code base. -
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IngestList is a java based tool to perform automated batch identification of file formats and to characterise some important properties. It is designed to meet the fundamental requirement of any digital repository.
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MARF is a general cross-platform framework with a collection of algorithms for audio (voice, speech, and sound) and natural language text analysis and recognition along with sample applications (identification, NLP, etc.) of its use, implemented in Java.
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HomSI
Homozygous Stretch Identifier from next-generation sequencing data
...The researchers typically use SNP arrays to determine the homozygous regions and then search for the disease gene by sequencing the genes within this candidate disease loci. Recently, the advent of next generation sequencing enables the concurrent identification of homozygous regions and the detection of mutations relevant for diagnosis, using data from a single sequencing experiment. In this respect, we have developed a novel tool that identifies homozygous regions using deep sequence data. Using *.vcf files as an input file, our program identifies the majo -
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ANNFiD
A forensic file identification tool using neural networks
Just carved a bunch of bytes and have no idea what they could be? Maybe ANNFiD can help. ANNFiD uses neural network to identify byte patterns. It can be trained and has a GUI to help in the process. The tool is still on a very early stage, but could improve exponentially with the help of the developer community -
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HTMLify
Convert into HTML faster!
HTMLify is a Java based text to HTML converter that can identify headers, paragraphs, ordered and unordered lists and tables in simple text such as that received in e-mail, and converts it into HTML. Currently, it uses a Swing GUI Client but can be integrated as an applet in a web page. -
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k-fileserverDB
Store files into Database.
...ITS A: Java Based Software. Opensource Postgresql Database. Store you files into Database. Make Single/Multiple identification. A Network Based Software Accessible to authorized Users only. Database replication. Assign Permission. -
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Exact Subgraph Matching Algorithm
Exact Subgraph Matching Algorithm for Dependency Graphs
...We have demonstrated the successful usage of our algorithm in three biomedical relation and event extraction applications: BioNLP 2011 shared tasks on event extraction, Protein-Residue association detection and Protein-Protein interaction identification. This Java implementation implements our ESM algorithm. See README file: https://sourceforge.net/projects/esmalgorithm/files/ If you use our ESM implementation to support academic research, please cite the following paper: Haibin Liu, Vlado Keselj, and Christian Blouin. Exploring a Subgraph Matching Approach for Extracting Biological Events from Literature. ... -
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A new open-source tool that integrates pipeline automated identification and phylogenetic studies of microbial communities using genes sequences
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An android application and supporting webservice and data import applications that allow users to identify plants based on their characteristics.
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clinicalStudyTracker
Clinical study tracker tracks case study members through activities.
Developed at Medical Research Council UK to meet a common clinical trial need to track various types of clinical data. Users log dates of completed tasks against participant ID. Simple, useable, reduces lost data! Makes graphical progress reports. -
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[2014-10-31] This project is obsolete, for latest version (6.1.3) see GitHub https://github.com/digital-preservation/droid (source) and http://www.nationalarchives.gov.uk/information-management/manage-information/preserving-digital-records/droid/ (binary) DROID (Digital Record Object Identification) is an automatic file format identification tool. It is the first in a planned series of tools developed by The National Archives under the umbrella of its PRONOM technical registry service. [2013-01-24] The binary download of the latest version of DROID has now been moved to The National Archives website: http://www.nationalarchives.gov.uk/information-management/projects-and-work/droid.htm The source code for the latest version of DROID remains available via Github: http://digital-preservation.github.com/droid/ [2012-09-07] DROID 6.1 has been released. ...
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D-finder is a bioinformatic search algorithm for the identification of D-sites in JNK interacting proteins. The algorithm is a combination of pattern matching and a hidden markov model (HMM) based on a training set of known JNK D-sites.
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Tools for the generation of content identification records. Examples of tool usage for the creation of file databases included.
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Jeck is a Java-based file identification project which comes as library, as a Swing application and as a console application.
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The main goal is to provide an API for processing files (images of scanned documents, etc) by adding a qr code to each document for posterior identification. The API provides functionality to encode and decode tagged documents.
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Pixy
java client for udp anidb api using Java AniDB API
...The following paragraphs are a description of the planned software, not of the software 'as is'. Pixy is an AniDB UDP Client written in java and based on the Java AniDB API by grizzlyxp. Pixy supports file hashing using various hash algorithms, file identification via AniDB, folder monitoring and regex-based moving of files. The goal of Pixy is to provide a lightweight application that can run on any OS supporting java and allow a high degree of automation. -
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This project will be used for the identification of the thumb impression. We will be having a image of thumb in our database and will use another image for matching purpose. We can also match the images which are not in the data base.
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AutoCloner4Oracle-SAP
Oracle RDBMS B&R Cloning Installation Systemcopy
This software help to clone complex Oracle Databases fast and with nearby no effort in EMC^2 Networker or IBM Tivoli environments. IT's also great for fast restore of database cause it generates required RMAN scripts for your needs. It also help to clone whole database with Backup plus Oracle Agents for OEM/GC/CC. It manages oratab file in AIX, Solaris and LINUX based environments and create a standard directory tree below ~/admin/$ORACLE_SID to have a look and feel for all of your...
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