Search Results for "fastq-join"
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Showing 157 open source projects for "fastq-join"
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BedrockConnect
Join any Minecraft Bedrock Edition server IP on Xbox One
On Minecraft Bedrock Edition, players on Xbox One, Nintendo Switch, and PS4/PS5 are limited to playing on 'Featured Servers' approved by Mojang/Microsoft. These players are not able to join servers via an IP/address. This is an issue for me and others, as the server community on Java edition was one of the major parts that made Minecraft what it was, and what also made the servers that are now considered 'Mojang Server Partners' what they are today. I wanted to fix this, so I made a solution that anyone can set up easily. -
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ViaVersion
Allows the connection of newer clients to older server versions
...The base ViaVersion jar runs on Paper and Velocity. We also have projects integrating ViaVersion to run on Fabric, Forge, Bungee, Sponge, or as a standalone proxy to join from basically any client version on any server version from the past decade. See HERE for an overview of the different Via* projects. Note that ViaVersion will be able to run best on either Paper servers or through ViaFabricPlus due to having direct access to client/server state and more extensive API. -
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Apache Drill
Apache Drill is a distributed MPP query layer for self describing data
...Drill supports a variety of NoSQL databases and file systems, including HBase, MongoDB, MapR-DB, HDFS, MapR-FS, Amazon S3, Azure Blob Storage, Google Cloud Storage, Swift, NAS and local files. A single query can join data from multiple datastores. For example, you can join a user profile collection in MongoDB with a directory of event logs in Hadoop. -
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123FASTQ
An intuitive and efficient tool for preprocessing Illumina FASTQ reads
123FASTQ performs all the pre-processes of Illumina next-generation sequencing reads (FASTQ files) easier than ever. Download the quick user manual for the latest version: https://dl.adbioinformatics.net/NGSNeeds/myTools/123Fastq_v1.3_Manual.pdf Authors: Milad Eidi, Samaneh Abdolalizadeh, Mohammad Hossein Nassirpour Supervisors: Javad Zahiri, PhD University of California San Diego Masoud Garshasbi, PhD Tarbiat Modares University, Tehran, Iran If you use 123FASTQ, please cite this preprint: 123FASTQ: an intuitive and efficient tool for preprocessing Illumina FASTQ reads https://www.biorxiv.org/content/10.1101/2024.03.08.584032v1 ########################################################## Take care of the details and ensure you use the latest version. ... -
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OpenAudible
Audiobook Manager for Audible Users
OpenAudible is a cross-platform audiobook manager designed for Audible users. Manage/Download all your audiobooks with this easy-to-use desktop application. Say goodbye to the hassle of managing your audiobooks across multiple devices. With OpenAudible, you can easily download, view, and manage all your Audible books in one place. Our lightning-fast conversion to MP3 and M4B audio formats makes it easy to enjoy your favorite books on any device. Plus, our automation features make it a breeze... -
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Datahike
A durable Datalog implementation adaptable for distribution
...We are building on the two projects and the storage backends for the hitchhiker-tree through konserve. We would like to hear experience reports and are happy if you join us. We provide a small stable API for the JVM at the moment, but the on-disk schema is not fixed yet. We will provide a migration guide until we have reached a stable on-disk schema. Take a look at the ChangeLog before upgrading. -
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adventure
A user-interface library, formerly known as text, for Minecraft
Adventure is a library for server-controllable user interface elements in Minecraft: Java Edition. The Adventure documentation should be used alongside the Javadocs. If you have further questions, feel free to join our Discord. Most users will want to use Adventure as a component of an existing modding platform. The best integrated are our Native Support, but we also support other platforms via adapters. -
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Pinot
Apache Pinot - A realtime distributed OLAP datastore
...Near Realtime ingestion with Apache Kafka, Apache Pulsar, Kinesissupports JSON, Avro, ProtoBuf, Thrift formats. Apache Pinot supports dimension lookup joins currently. Full SQL join support in Apache Pinot is coming soon. In the interim, full SQL joins can be performed by querying Pinot via the Trino or PrestoDB connector. Apache Pinot provides SQL interface for querying interactively, as well as programmatically via rest-api. -
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JSqlParser
JSqlParser parses an SQL statement and translate it into a hierarchy
...JSqlParser is not limited to one database but provides support for a lot of specials of Oracle, SqlServer, MySQL, PostgreSQL. To name some, it has support for Oracles join syntax using (+), PostgreSQLs cast syntax using ::, relational operators like != and so on. Then the result can be accessed in a structured way. The generated Java class hierarchy can be navigated using the Visitor Pattern. -
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TypeDB
TypeDB: a strongly-typed database
...TypeDB allows you to model your domain based on logical and object-oriented principles. Composed of entity, relationship, and attribute types, as well as type hierarchies, roles, and rules, TypeDB allows you to think higher-level, as opposed to join-tables, columns, documents, vertices, edges, and properties.Types provide a way to describe the logical structures of your data, allowing TypeDB to validate that your code inserts and queries data correctly. -
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OrientDB
DBMS supporting graph, document, full-text and geospatial models
OrientDB is an Open Source Multi-Model NoSQL DBMS with the support of Native Graphs, Documents, Full-Text search, Reactivity, Geo-Spatial and Object Oriented concepts. It's written in Java and it's amazingly fast. No expensive run-time JOINs, connections are managed as persistent pointers between records. You can traverse thousands of records in no time. Supports schema-less, schema-full and schema-mixed modes. Has a strong security profiling system based on user, roles and predicate... -
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BBMap
BBMap short read aligner, and other bioinformatic tools.
...BBNorm: Kmer-based error-correction and normalization tool. Dedupe: Simplifies assemblies by removing duplicate or contained subsequences that share a target percent identity. Reformat: Reformats reads between fasta/fastq/scarf/fasta+qual/sam, interleaved/paired, and ASCII-33/64, at over 500 MB/s. BBDuk: Filters, trims, or masks reads with kmer matches to an artifact/contaminant file. ...and more! -
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FileCut
Simple cross-platform application to cut and join any text file.
FileCut is a simple easy-to-use cross-platform application to cut to a given line and then join any text file. It is also possible to join in normal or reverse order. Works also from command-line interface, e.g. 'java -jar filecut.jar -c file.txt . 10', to cut 'file.txt' at line 10, and 'java -jar filecut.jar -j . >file.txt', to join files in the current directory in 'file.txt'. FileCut is portable, does not need installation and is developed in Java, so needs the Java Virtual Machine (version 6 or higher) that, in the case, is very easy to download and install. -
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Eclipse Tomcat Plugin
Simple handling of a tomcat server in Eclipse IDE
The Eclipse Tomcat Plugin provides simple integration of a tomcat servlet container for the development of java web applications. You can join us for discussion in our IRC channel #tomcatplugin on Freenode. Please be patient if noone is answering instantly. You can also create a new ticket if you need help. This project is a fork of the original Sysdeo Tomcat Plugin. Please use http://tomcatplugin.sf.net/update for installation. -
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Openbravopos
Open Source Openbravo POS convert to Commercial Retail ERP and POS
...Configuration of keymaps for quick access to options and featured products. https://www.youtube.com/watch?v=Aai3iYLP2TQ&pp=ygUNb3BlbmJyYXZvIGtkcw%3D%3D Contact: both version of Openbravo POS osopenbravo@gmail.com Join Our Channel: https://whatsapp.com/channel/0029Vavg10ZIXnlvG5dUDu0x -
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Simple Russian Typing Trainer
A simple program to train to type in Russian.
...You do not need a real russian keyboard on your computer. See how-to-use-file. In case of needing help, bug report or translation mistakes, please use the forum here on sourceforge.net or join the Telegram group: https://t.me/+L2vWRB1tuuw3ZjMy -
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miRDeep*
MiRDeep*
Please cite: An, J., Lai, J., Lehman, M.L. and Nelson, C.C. (2013) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acids Res, 41, 727-737. We will create index for you if you tell us your interested species (j.an@qut.edu.au). download command line version "MDS_command_line_Vxx.zip" clicking "Browse All Files" please find miRPlant in sourceforge for plant miRNA prediction. -
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MekWars is a chat and campaign engine for MegaMek. Players join MekWars servers to find opponents for MegaMek games. MekWars servers can be configured to run campaigns and scenarios - tracking player's units, experience and funds.
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FastQC
A quality control analysis tool for high throughput sequencing data
...Its goal is to provide a simple way by which to check the quality of raw sequence data coming from high throughput sequencing pipelines. It does this by running a modular set of analyses on one or more raw sequence files in fastq or bam format. It then produces a report summarizing the results, and highlighting any areas where the library may appear unusual. This should then direct you to where your data may have problems and allow you to take necessary steps to correct it before doing any further analysis. FastQC is not tied to any specific type of sequencing technique, so it can be used to look at libraries of various experiment types (Genomic Sequencing, ChIP-Seq, RNA-Seq, BS-Seq etc etc). -
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Mycat2
MySQL Proxy using Java NIO based on Sharding SQL, Calcite
...Custom Calcite distributed query engine, edit SQL to relationship algebra expression, rule optimization engine, and cost optimization engine, generate physical execution plan, support logic view. Any cross-currant cross-table join query, support cross-currant cross-table non-associated query, support cross-currant cross-table association query, support cross-currant cross-table Window grammar, support global secondary index, limited support storage process, support visualization configuration. Support parallel extraction of result sets, support the automatic transfer of back-end result sets, support multiple routing notes, and optimizer notes. ... -
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TravBot | Free Travian Bot
A simple free travian bot
...The bot also has a builder that allows you to create unlimited build queues to upgrade your villages and build new buildings. There are more features like attack warnings and troop training. Offical site: https://travbot.eu/ Join the discord channel for more information and support! - - https://discord.gg/SVaZx3A - - -
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Develop an experimental framework for simulated multiplayer (model) railroads. It could be based on the VRML/X3D standard and it could use internal scripting with ECMAScript and MU systems that provide network sensor interfaces. Project Homepage: http://simulrr.sourceforge.net The SRR Framework has been used by the SrrTrains v0.01 project Demo 2012: https://www.youtube.com/watch?v=bHBwXmMfF1c Home of SrrTrains: https://lc-soc-lc.at/host
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Forum4U.ONLINE
Forum4U.ONLINE - Best Forum For Ever!
Forum4U.ONLINE - Best Forum site and Android-app for anyone! Join for free to our Command! App have full integration with Forum site! -
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TymeacDSE
Data Parallel Engine for JavaSE
TymeacDSE is a Fork-Join application server employing the Divide-and-Conquer methodology in either an embedded or remote (RMI) configuration. -
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TymeacSE
Task Parallel Engine for JavaSE
TymeacSE is a full-feature, multi-threading, fork-join framework for Java SE development (RMI and internal server). TymeacSE provides a high performance queuing facility, professional thread management and recursive processing that is easy to use.
