Draw vector graphics to scale using a descriptive language
JaxoDraw: Feynman Diagrams made easy!
MiRDeep*
Particle Image Velocimetry
Generates custom astrolabe EPS files
A documentation and report generator for systems biological models
jchart2d is a real-time charting library written in java.
cy2fluxviz : Cytoscape 2 plugin for flux distribution visualization
Converts raster images into EPS (Encapsulated Post Script)