Search Results for "sequence scaffold, java" - Page 9

primejobs is program to control and visualize user's commands execution flow. The commands (jobs) are to be executed at specified time in specified sequence. Unlike usual crontab/scripting primejobs allows direct control of the execution flow, setting notifications related to job events, stop/resume execution at any point etc. primejobs design is influenced by OddJob (http://rgordon.co.uk/oddjob/index.html) which is regarded as major breakthrough in understanding how practical job...

Java Chaotic Random Number Generator - Inspired by chaos theory, the intent of this generator is to produce unseeded, unpredictable numbers. The numbers will not follow a predictable sequence and will not rely on a pseudorandom algorithm.

MARSHAL (Managing Additional References in Short-Read Alignment) enables short-read nucleotide sequence aligners to simultaneously analyze multiple references, facilitating the detection of structural variation.

Danaides stores meta-data from biological banks in a graph databases as well as OBO formatted ontologies. It also provides a web query interface to parse ontologies or extract nodes based on ontology requirements. Example: Get all known elements that are in family of Fish (species ontology) AND a RNA (sequence ontology).

Given a String , returns the next logically sequential string defined by a rule. The basic rule is, given a sequence of alphabets, it checks the string and returns a new string with one or more alteration. javadocs and source codes available inside.

PARPs database is a web-based tool whose features include experiment annotation, protein database searching, protein sequence management.Statistical validation, , visualization, and converters from raw MS data open mzXML mzData format