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Evoker is a graphical tool for plotting genotype intensity data in order to assess quality of genotype calls. It implements a compact, binary format which allows rapid access to data, even with hundreds of thousands of observations.
PLEASE NOTE: This source repository is no longer active. See the github link above for the latest version.
SWORD (Simple Web-service Offering Repository Deposit) is a protocol for interoperable deposit between repository platforms. It was developed by a JISC project during 2007, followed by the SWORD v2 project in 2011. See www.swordapp.org for further info.
This project aims the requirement of managed informations / documents in the treatment of patients, i.e. integrated care. The underlaying data model implements standards of electronic health recording, the project is based on a SQL db and Java EE framework. This is currently a student driven project for educational purposes.
This project aims to build a suite of Natural Language Processing tools. Modules will include corpus indexing and access tools, a part-of-speech tagger, tokenisers, text classification software, etc.
WideStudio is an Integrated Development Environment (IDE) for building window applications in C++, Ruby, Python an Perl for Windows, MacOSX, Linux, FreeBSD, SOLARIS and other unix and BTRON and T-Engine. This is open and free (under MIT/X Consortiun Lice
Analogical Modeling is an exemplar-based approach to machine learning which imitates human behavior in outcome prediction. Its design has been applied to many natural language and other phenomena which exhibit variable behavior. A Perl XS implementation is available from http://humanities.byu.edu/am/ . This project is a Java implementation of the same. For more information on Analogical Modeling, see http://en.wikipedia.org/wiki/Analogical_modeling .
This is a Java-based project for complex event extraction from text and co-reference resolution. Currently the code can read BioNLP shared task format (http://2011.bionlp-st.org/) and i2b2 Natural Language Processing for Clinical Data shared task format (https://www.i2b2.org/NLP/DataSets/Main.php). Event extraction includes finding events and the parameters for an event in a text.
The method is based on SVM but other ML algorithms can be adopted. The method details are explained in the...
TPoX is an XML database benchmark based on a financial application scenario. It is used to evaluate the performance of XML database systems, focusing on XQuery, SQL/XML, XML storage, XML indexing, XML Schema support, XML updates, and other aspects.
Server per servizi Javascript dal browser. Nato come "educativo" è diventato utile per applicazioni Ajax e potenziare le JQuery.
Non serve più per fare le pagine dinamiche di un sito conoscere linguaggi ad alto livello ma solo Javascript e HTML
Framework for making Windows applications that are one .exe file in AutoHotKey_L,C++,C#, VB.NET,Java,Groovy,Common Lisp,Nemerle,Ruby,Python,PHP,Lua,Tcl,Perl,Jint,S#,WSH VBScript,HTML/JavaScript/CSS,COM, PowerShell without compiling . For .NET 4.
Abuild is no longer being maintained. In the years since its creation, better options have emerged. Even so....
Abuild is a scalable build system that applies Object-Oriented principles to the build problem. It is powerful and flexible and helps ensure build integrity while simplifying the user's view of the build. A thorough user's manual is included.
Soaplab is a generator of Web Services providing a programmatic access to command-line (and other) applications on remote computers (an example of its usage is available at http://www.ebi.ac.uk/soaplab/)
A set of software utilities for processing and analyzing 16S rRNA genes including generating NAST alignments, chimera checking, and assembling paired 16S rRNA reads according to reference sequence homology.
This is a strategy game written in java, with earlier versions in perl. You must enter co-ordinates, to build up stacks, set up chain reactions and eventually annihilate the computer player
Arabisc is speaker independent large vocabulary continuous speech recognizer for Arabic language released under GNU license.It is also a collection of open source tools that allows researchers and developers to build speech recognition systems for Arab
GPL-licensed Electronic Medical Record and Practice Management system for medical providers that runs in any web browser in multiple languages. It provides an XML-RPC backend and multiple import and export formats, as well as reporting and other features
...You type your regex, type a string to match and, for every characters entered you'll see if it matches and also see a full description of the matching. It's a NFA-based matching as in Perl 5.
Parsers for biological data based on scanner generators like Flex (C), Re2c(C), Jflex (Java) and Ifickle (Tcl). This scanner generators are providing easier maintainance, development and higher speed than hand written scanners. Scanner output is SQL.
VI Compute Server (VICS) is a collection of grid-enabled bioinformatics tools with HTTP (browser) and Web Services (scriptable) interfaces. JCVI VICS is licensed under the Perl Foundation Artistic License 2.0.