Search Results for "ekho-data" - Page 48
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Showing 6133 open source projects for "ekho-data"
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A tool for extracting and preprocessing spectral count data for label-free quantitative proteomic analysis. This program is designed to be used with the Trans-Proteomic Pipeline (TPP).
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JSONjuicer
JSON parser and encoder
A Java open-source library which makes encoding and decoding Java data-structures to and from JSON text easy and intuitive. -
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A lightweight IDE for Artificial Intelligence. Started as GUI for the Euler reasoning engine. The sources can be N3, RDF, OWL, UML, eCore, plain XML or XSD, files or URL's. Wraps Drools (or CWM, FuXi) as N3 rules engines. Model based app. generation.
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SolfegeME
Java ME ear trainer
...One can make her own music pieces to learn, using JFugue (http://www.jfugue.org/) syntax and convenient text editor. Base libraries: GUI: Thinlet (http://sourceforge.net/projects/thinlet) Sound: JFugue2ME (http://sourceforge.net/projects/jfugue2me/) Data management: BinGear (http://sourceforge.net/projects/bingear) Thanks to www.iconirchive.com for images. -
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Waterloo
Java-based scientific graphics
Java-based scientific graphics with support for Java, Groovy, MATLAB, Python, the R statistical environment, Scala and SciLab. -
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LAML:Linear Algebra and Machine Learning
A stand-alone Java library for linear algebra and machine learning
...The goal is to build efficient and easy-to-use linear algebra and machine learning libraries. The reason why linear algebra and machine learning are built together is that full control of the basic data structures for matrices and vectors is required to have fast implementation for machine learning methods. Additionally, LAML provides a lot of commonly used matrix functions in the same signature to MATLAB, thus can also be used to manually convert MATLAB code to Java code. -
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GNomEx
A Genomic LIMS and Data Repository
Our source code is now on GitHub: https://github.com/hci-gnomex/gnomex. Please refer to GitHub for the latest code. GNomEx is Genomic LIMS and Data Repository. It holds annotated experiments and downstream analysis and serves data tracks to popular genome browsers such as IGB, IGV, and UCSC genome browser. The LIMS handles all aspects of the experiment from order through results delivery. Experiment platforms supported include Illumina HiSeq, MiSeq, iScan, ABI Sanger sequencing, Affy and Agilent Microarrays, Sequenom MassArray and Bioanalyzer. ... -
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Cress Tool Suite
Cress is a comprehensive toolset for graphical service/workflow design
Cress (Communication Representation Employing Systematic Specification) allows graphical description of a wide variety of services such as in data communications/telecommunications, but Cress is not limited to this. The approach allows services to be described graphically as (work)flows of activities. Cress diagrams are automatically translated into formal languages for rigorous analysis and verification, and are also automatically translated into implementation languages for deployment and validation. ... -
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DataMakerApi
An API for Java programmers to make test data
DataMakerApi is an API packaged as a jar for Java programmers to use in generating randomized test data in any quantity desired. An API is used because the output can take so many forms (SQL for traditional databases, JSON text for NoSQL databases, XML or delimited text for flat files, etc...). This API will facilitate the work of creating test data for a wide range of applications. -
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blitz-image
GPU-accelerated image processing for java
blitz-image is a library to support extremely fast image processing in java, harnessing GPU acceleration via OpenCL. Although more features will be added in time, the initial focus is on very fast high-quality image resizing, including bicubic resizing (both upscale and downscale). The performance of a typical bicubic upscale operation is typically in the order of 10 times faster than via the standard AWT mechanism using RenderingHints.VALUE_INTERPOLATION_BICUBIC. The library... -
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Mauve computes and interactively visualizes genome sequence comparisons. Using FastA or GenBank sequence data, Mauve constructs multiple genome alignments that identify large-scale rearrangement, gene gain, gene loss, indels, and nucleotide substutit
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A library of utility classes that simplify working with the XML APIs provided by the JDK. These have largely been developed to meet specific needs in the maintainers' other professional and personal projects. Requires JDK 1.5 or later. Available from Maven Central: <groupId>net.sf.practicalxml</groupId> <artifactId>practicalxml</artifactId>
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XSD Orphan Remover
Java application that removes XML Schema orphan structures
This is a Java application that removes XML Schema orphan structures including complex and simple types, and groups. Orphan means that it is not used by any other structure within the same XML Schema namespace. -
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GEDI (Groundtruthing Environment for Document Images) is a highly configurable document image annotation tool. Its basic structure involves two types of files, an Image file, and a corresponding .XML file in GEDI format. LAMP Univ of MD, College Park, MD
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XAware Data Integration Project
Create XML and JSON data services from any data source
Create services to integrate applications & move data of any type. Build data views across DBMS, SOAP, HTTP/REST, Salesforce, SAP, Microsoft, SharePoint, Text, LDAP, FTP sources to read, write & transfer data. Eclipse designer & run-time engine. -
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CoNet
Find relationships between repeatedly observed items
CoNet is a Cytoscape plugin that detects significant non-random patterns of co-occurrence (copresence and mutual exclusion) in incidence and abundance data. It has been designed with (microbial) ecological data in mind, but can be applied in general to infer relationships between objects observed in different samples (for example between genes present or absent across organisms). -
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IO-Tools
Java utilities for byte streams, readers and format detection
Io-tools is a group of libraries written in java for dealing with streams. * Easystream is a set of utilities to connect streams and to transform OutputStreams into InputStreams. In order to to find wiki, forums and issue trackers please refer to the subproject home page: http://io-tools.sourceforge.net/easystream/index.html * Wazformat is focused on format detection of input streams. In order to to find wiki, forums and issue trackers please refer to the subproject home page:... -
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Generic REST Fetcher
Execute a cascading sequence of REST calls to a common end-point
REST API's often require multiple calls to achieve a business objective. Eg get a list of objects, then get data for each object. This application allows you to transform data received from one REST call to determine other methods to call. All this is configured via an XML file. A simple example is fetching data for all respondents to a Survey Monkey survey. You need to get the set of respondent ids, then call the API passing in the list of respondent ids. ... -
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Sesame
Java RDF Framework
...It is succeeded by the Eclipse RDF4J project, which can be found at GitHub and at http://www.rdf4j.org/. Sesame is a de-facto standard framework for processing RDF data. This includes parsing, scalable storage, reasoning and full SPARQL 1.1 query/update support. Sesame offers a fully modular toolkit and an easy-to-use Java API that can be connected to all leading RDF storage solutions. -
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Stock ReturnAnalysis
Java program that uses Monte Carlo
This program uses the Monte Carlo simulation to calculate the stock returns .It uses the historical data . -
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Freemind Search Plugin
Plugin to allow search from multiple Freemind maps
This is a plugin for FreeMind ( https://sourceforge.net/projects/freemind ) The main app only allows you to search the current open map. This plugin will allow you to search multiple maps for chosen key words. Code now at https://github.com/leonarduk/freemindsearchplugin -
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Limpopo is a library for MAGE-TAB parsing and validation that will read mage-tab files into an object model, and includes a plugin mechanism that is open and extensible for writing MAGE-TAB data to other data resources such as a database.
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NORD POS
Enhanced mobile version of POS
NORD POS Web Application Platform was based on a fork of Openbravo POS. NORD POS Web Application Platform includes Jetty 9 and Apache Derby embedded servers, device drivers, Pentaho Data Integration engine, new Java Swing interface and more the other changes as opposed to Openbravo POS. NORD POS presents a new interface, full cross-platform and support of the many mobile web applications. All in one platform based on Stripes JavaEE Framework. The cashiers and storekeepers have access to data from a tablets or smartphones. -
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JTurboExplorer
Database explorer to MySQL, Oracle, Sybase & others. Source maker JSF.
It is a tool to help programmers to check your databases and generate code so easily. Lists the tables and views of databases, MySQL, Oracle and Sybase. Load Data from Excel 97-2003 files, exports the data from the table to Excel 97-2003 file. Generate Stored Procedures from table to insert, update, delete, query and paging. Generates code JSF2.0 (Action) and PrimeFaces (xhtml) from the table, code for Struts 1.3, etc.
