Showing 4992 open source projects for "research"

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  • 1
    SBSI
    SBSI (Systems Biology Software Infrastructure) is a suite of tools for systems biology, such as parallelized numerical algorithms, and a Java, Eclipse RCP based client for visualizing results, running simulations, and integrating SBML based plugins.
    Downloads: 0 This Week
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  • 2
    Rubato Composer
    Rubato Composer is a music software based on the concepts and models of mathematical music theory and equally suited for music composition, analysis, performance, and logical or geometric operations.
    Downloads: 0 This Week
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  • 3
    SterHemel

    SterHemel

    Volg de gebeurtenissen aan de sterrenhemel op je mobiel

    De gebeurtenissen aan de sterrenhemel in Nederland en België op je mobiel! SterHemel toont in een handomdraai wat er aan de sterrenhemel te zien is met het blote oog, een verrekijker of een kleine telescoop. De app is bedoeld voor waarnemers in Nederland en België en is daarom in het Nederlands/Vlaams gemaakt. De app toont de gebeurtenissen aan de sterrenhemel onder andere in de vorm van een astrokalender, de tab "Vannacht aan de hemel" met inforatie over Zon, Maan planeten en...
    Downloads: 0 This Week
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  • 4
    MathOCR

    MathOCR

    A printed document recognition system that can deal with formula

    MathOCR try to recognize printed scientific document including mathematical formula , result is available in LaTeX and HTML.
    Downloads: 2 This Week
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  • 5

    DiSir

    In-silico digestion of proteins.

    Downloads: 0 This Week
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  • 6
    PepSir

    PepSir

    PepSir checks and filters for peptide proteotypicity.

    PepSir checks and filters for peptide proteotypicity.
    Downloads: 0 This Week
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  • 7
    Auto Primer3

    Auto Primer3

    Automatically design primers to genes/coordinates using primer3.

    PLEASE NOTE: THIS PROJECT PAGE WILL NO LONGER BE UPDATED - PLEASE USE THE GITHUB PAGE (https://github.com/gantzgraf/autoprimer3) TO FIND THE LATEST RELEASE (https://github.com/gantzgraf/autoprimer3/releases/latest). AutoPrimer3 retrieves gene information, DNA sequences and SNP information from the UCSC genome browser and uses primer3 to automatically design primers to genes or genomic coordinate targets. Primers may be designed using information from any of the UCSC hosted genomes...
    Downloads: 0 This Week
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  • 8
    scipion-xmipp

    scipion-xmipp

    Image processing framework to integrate EM software packages.

    Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated...
    Downloads: 0 This Week
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  • 9
    p-TAREF

    p-TAREF

    Plant miRNA target prediction tool

    Developed by Dr Ravi Shankar (Corresponding author) and Ashwani Jha @ SCBB, CSIR-IHBT. p-TAREF stands for plant TARget REFiner. It identifies plant microRNA targets on the basis of multiple feature information. Read more http://www.biomedcentral.com/1471-2164/12/636 Query, comment etc please mail any one of us @ ashwanijha.bioinfo@gmail.com or ravish9@gmail.com
    Downloads: 0 This Week
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  • 10

    NexusDataLink

    Connect, monitor and control your (embedded) systems remotely. m2m/IoT

    Connect, monitor and control your systems or embedded devices remotely (m2m/IoT) - for example your Raspberry Pi. The communication interface is defined in XML automatically providing a REST interface. NexusDataLink integrates smoothly in existing software or firmware and significantly reduces connection- or communication-related source code.
    Downloads: 0 This Week
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  • 11
    Downloads: 0 This Week
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  • 12
    Vision2u

    Vision2u

    free image processing software

    Vision2u offers a free image processing software for personal use and research. Primary tasks of the image processing can be realized during simple operation of the software. Every Web cam owner can have simplest measuring, counting or tasks of monitoring done without high capital outlays.
    Downloads: 1 This Week
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  • 13
    dotCMS

    dotCMS

    dotCMS helps enterprises create, manage and deliver content anywhere.

    dotCMS is a visual, headless CMS built for compliance-led enterprises that need to manage and scale digital content across brands, regions, and channels. From streamlining governance to enabling visual editing at scale, dotCMS powers global organizations like Telus and BNP Paribas to consolidate platforms, reduce overhead, and launch faster. Whether you're managing 10 or 1,000+ sites, dotCMS brings flexibility, security, and efficiency to enterprise content operations.
    Downloads: 0 This Week
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  • 14

    PalOOCa OpenOffice Extension for Palo

    palo olap open office calc plugin for data analysis

    ...If used together with the Open Source Jedox/Palo OLAP Server it completes the Open Source MOLAP-Stack for Business Intelligence. Additionally to Jedox OLAP it is also (read-only) compatible to (almost) all OLAP servers supporting XMLA. Intended audiences are: - scientific research & teaching - financial analysis & controlling Consult the FAQ in the Wiki.
    Downloads: 0 This Week
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  • 15

    OntoMetriCalc

    A Java API for measuring OWL ontologies

    OntoMetriCalc (Ontology Metrics Calculator) is a Java API for measuring OWL ontologies based on Jena.
    Downloads: 0 This Week
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  • 16
    GESPA

    GESPA

    Accurately predicts disease association of single nucleotide mutations

    GESPA (GEnomic Single nucleotide Polymorphism Analyzer) is a bioinformatics tool for classifying Nonsynonymous Single Nucleotide Polymorphisms (nsSNPs). GESPA predicts if a nsSNP is pathogenic using reports from literature and various algorithms to assess conservation in orthologous and paralogous protein alignments. Using reports from literature, GESPA is also able to predict the phenotype of a nsSNP with high accuracy. The software can be used clinically to determine if observed nsSNPs are...
    Downloads: 1 This Week
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  • 17
    HaploView is a Java based tool for use by biologists in the study of genetic haplotype data. It provides a quick, easy interface to many common tasks involved in such analyses. Please go to the homepage below for the latest version!
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    Downloads: 27 This Week
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  • 18
    Exreco

    Exreco

    EXperimental REplicator COllider

    The project is moved to GitHub : https://github.com/bekisz/exreco/ Exreco is a agent based platform for the simulation and study of the Darwinian evolutionary process. It aims to support the exploration of genetically rooted phenomena like - aging (programmed cell death) - sexual and asexual reproduction - altruism of individuals - spread of diseases The typical way of using Exreco starts by defining the behavior of your replicators ( agents that can reproduce and evolve over...
    Downloads: 0 This Week
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  • 19

    gametes

    Generate complex SNP models and heterogeneous datasets

    Genetic Architecture Model Emulator for Testing and Evaluating Software (GAMETES) is an algorithm for the generation of complex single nucleotide polymorphism (SNP) models for simulated association studies. GAMETES is designed to generate epistatic models which we refer to as pure and strict, that constitute the worst-case in terms of detecting disease associations, since such associations may only be observed if all n-loci are included in the disease model. User friendly GAMETES software...
    Downloads: 10 This Week
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  • 20
    JInsect
    The JINSECT toolkit is a Java-based toolkit and library that supports and demonstrates the use of n-gram graphs within Natural Language Processing applications, ranging from summarization and summary evaluation to text classification and indexing.
    Downloads: 0 This Week
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  • 21
    Revolution Java Libraries

    Revolution Java Libraries

    Java libraries for creating applications

    Revolution Java libraries are downloadable .jar files used for creating applications. They are designed specifically for creating agent-based modelling applications. revolution.jar Contains the basic classes need to create an application. revolution-apps.jar Extends revolution.jar with a number of in-built application templates.
    Downloads: 0 This Week
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  • 22
    J-Syncker
    This application assists in generating pre-compositional material based on a computational interpretation of the 'Schillinger System of Musical Composition' (Schillinger 1946).
    Downloads: 0 This Week
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  • 23
    GenomeView
    GenomeView is a genome browser and annotation editor that displays reference sequence, annotation, multiple alignments, short read alignments and graphs. Most major data formats are supported. Local and internet files can be loaded. This project has moved to GitHub: https://github.com/GenomeView/genomeview
    Downloads: 0 This Week
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  • 24

    XLogo4Schools

    A Logo interpreter and programming environment specialized for schools

    A Logo interpreter and programming environment specialized for schools. It is a revised version of XLogo, published on http://xlogo.tuxfamily.org/. The Logo dialect is almost the same as Xlogo's, but some Logo commands were reimplemented to fit with the new programming environment and workspace. Some commands which were buggy in the original XLogo have been fixed. The interpreter works now more efficient due to the usage of more suitable data structures. The output of turtle graphics...
    Downloads: 2 This Week
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  • 25
    mathtoweb
    MathToWeb is a Java-based authoring tool that converts mathematical expressions written in AMS-Latex to presentation MathML. It can be applied to single equations or entire documents containing many hundreds of equations.
    Downloads: 3 This Week
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