Search Results for "fastq-join" - Page 3
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Showing 157 open source projects for "fastq-join"
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Twitch Streamer Bot And Loyality Manager
Manage chat and your viewers. JavaScript or Java based chat bot-
* Due low interest for this program the development has been discontinued for now. Sorry. * This program is like a swiss pocket knife. You can manage your viewers, add more functionality to your chat and your stream and more. Check out Wiki page for bot. This wiki is not up to date anymore. Please see all the news and updates at website: http://streambud.com/ - UI to keep an eye on your stream; - Stream events; - Plugins; Be a patreon:... -
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Grid
BOINC Java GUI (and much more)
...It's goal is to make the UI simpler and more elegant, and, in the future, include features that can make BOINC more fun to use, such as: - Rank system: rank up as you acquire more credit - Friend's list: add friends, track their progress, join in teams or compete - Facebook integration: share your achievements on Facebook -
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D3Kbot is a list handling chat bot for twitch.tv streamers The bot will allow chatters to join a waiting list to play on stream!! PLEASE READ THE WIKI vvvvvvvvvvvvvvvvvvvvvvvvv
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Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework with the Picard SAM JDK, and command line tools similar to SAMtools. The file formats currently supported are BAM, SAM, FASTQ, FASTA, QSEQ, BCF, and VCF. For a longer high-level description of Hadoop-BAM, refer to the article "Hadoop-BAM: directly manipulating next generation sequencing data in the cloud" in Bioinformatics Volume 28 Issue 6 pp. 876-877, available online at: http://dx.doi.org/10.1093/bioinformatics/bts054 Note that the library part of Hadoop-BAM is mainly for developers with experience in using Hadoop. ...
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SuRankCo
Supervised Ranking of Contigs in de novo Assemblies
...Renard (http://www.biomedcentral.com/1471-2105/16/240/abstract) PLEASE NOTE, it is recommended to read the paper and the readme.txt file before using SuRankCo. Update Jun2015: * Minor changes to enable BAM support. Update Feb2014: * Added support for FASTA/SAM assemblies in addition to ACE/FASTQ(QUAL). NOTE: features of FASTA/SAM assemblies do not include BaseCount, BaseSeqmentCount and ContigQualities yet. -
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An open source email archiving and e-discovery solution. * Join the conversation on linkedin http://www.linkedin.com/groups/Enkive-4078797?trk=myg_ugrp_ovr *Subscribe to mailing lists https://www.enkive.org/community/mailing-list-signup * contribute code, test, document
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UTServerStatus
Urban Terror Server Monitoring Program
...This does not require recon privileges, since most players do not have this level of access. The motivation for its creation was to eliminate the need to wait around on a server waiting for other players to join. This program makes it possible to monitor the server while browsing the web or even while away from the computer entirely. The program sends a notification popup to the OS when the server is active with players and also plays a short beep audio clip to get your attention if you are away from the computer. By entering your ut player name into the program you can ensure the program will not be triggered by your presence on the server, so you can join the server and safely minimize until another player joins without worrying about missing the moment when they join the server. -
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Android Video Editor for those who wants a simple video editor app. Function : Cut a video segment Join two videos Extract MP3 from Video Speed up Video Compress Video Resolution Change Video Extract Video from Video.
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aprioriProcess
Apriori is designed to operate on databases containing transactions.
...Key Concepts : • Frequent Itemsets: The sets of item which has minimum support (denoted by Li for i th -Itemset). • Apriori Property: Any subset of frequent itemset must be frequent. • Join Operation: To find Lk , a set of candidate k-itemsets is generated by joining Lk-1 with itself. -
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CommandCentre
Command Centre
Free to join for developers who support the Free Software Foundation cause. This is my research project from 2003, which I recently updated with acceleration- and console changes (Surround Sound, Doppler Effects, Device Updates, Physics) in a long weekend but project should be considered abandoned. Additionally, the Performer libraries have been abandoned by Silicon Graphics. -
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di-history-join-plugin
Plugin for Pentaho Data Integration used to supply a method to join tw
This plugin supply a method to join two tables using the date-from and date-to history. It use the two dates that indicate the life of the record and join using a query (like the database join plugin) to resolve the record's story of the two entities. -
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TriageTools
Tools for partitioning and prioritizing fastq data
TriageTools is a collection of tools for partitioning raw data (fastq reads) from high-throughput sequencing projects. The tools are designed for basic data management as well for prioritizing analysis of certain subsets. The project wiki contains usage information. -
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F-Split
This application can split and join any files
This is a simple Java application which can run on any platform with Java installed. It has the capacity to split any files regardless of its size. It can also join them to create the original one. It works very fast and also has the ability to show the current and overall progress of the task. This is multi-threaded and thus takes advantage of modern day CPU. -
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DimerRemover
Remove adapter dimers from NGS data
This program can be used to count or remove adapter dimers in fastq files. Using a provided adapter sequence, it generates variations of this sequence and stores them in a hash table. The reads can then be directly matched against the hash. It is far more time efficient than doing alignment. -
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ourfilesystem
Peer-to-peer file-sharing system.
...You can search information people have shared about their files and download a file from them if you do not already have it. Files are shared within groups. Anyone can create a group and only allow whom they wish to join. Public and private messages are also supported. -
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Data Matrix
Java Api to manipulate simple on data of Matrix Type
Java Api to manipulate simple on data of Matrix Type. There is lot of usefull methods like resize, insert , remove, sort and lot of other methods. Usefull methods to manipulate with diagonals. For example you can create block diagonal matrix. There is lot of usefull methods to manipulate on mathematic matrix also, like determinant , norm , minor , cofactor , solveLienarSystem , arithmetic operations also and lot more. -
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GrandTestAuto (GTA) is a simple tool for the complete testing of Java software - a kind of JUnit on steroids. GTA has been in development for a number of years. This sourceforge project makes it easier for other developers to join in.
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Inter FTP Transfer
Transfer files between FTP servers
iftpt is a Java CLI application that allows one to transfer files from one FTP server to another without having to download the files to a computer and then uploading them again to the target server one by one. NOTE: This project was created in time of desperation so it may not fulfill all your FTP needs. If that's the case, you are welcome to modify it or you can simply join the project and apply your fixes. -
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Super Battleship World
Battleship through network
...Main Features: - Player VS PC - Player VS Player through network - Chat available in PvP mode. For playing through network, first you have to create the server and then ask Player 2 to enter the host IP in order to join the game. Attached you'll find the compiled code (JAR) and the sources (Netbeans project). Currently it needs a lot of improvements which I can't find the time to do. Here are the most critical: - It's sometimes too slow when you're playing through network; - The game sometimes crashes when the second player enters the room; - It's not possible for the other player to receive messages while it's his/her turn. ... -
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BACnet Web Services Simulator (ampii)
A Simulator/Tester for the BACnet/WS 2 protocol.
...PLEASE NOTE: this implements "PPR1" of the protocol that will go into public review in spring 2014. It is currently a committee draft. If you would like a copy, please join the BACnet Data Modeling Working Group by contacting its convener. See www.bacnet.org for info. The primary purpose for writing this was to spur development of prototypes to test the protocol. However, it has a BSD license, so you can do whatever you want with it. -
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Hokan is an IRC bot developed using Java programming language and using PircBot framework. First version development was started around year 2001. Join #HokanDEV@IRCNet to find out more! Current version of Hokan is maintained in GitHub: https://github.com/petria/hokan_ng
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FU-18-newsuperyoshi
Fly, bomb, shoot sh*t.
FU-18 is an open source, micro-transactioned arcade style game. If you would like to join the project, shoot me an email at newsuperyoshi@icloud.com and I'll get back to you. -
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JFileSplitter
a java tool to split and join huge files
Using this app you can easily split huge files so that you can easily transfer them in to drives. CHECK OUT AND SUPPORT MY LATEST ANDROID PROJECTS IN HERE: https://play.google.com/store/apps/developer?id=Deepak+PK -
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JFileSplit3.00g
Split your files with GUI Platform Independent Tool
JFileSplit3.00g ===================================== -->All new Lightweight Swing based GUI -->Platform Independent Tool -->Split and Join Using same Tool -->Portable!! no need to install -->Small in Size(as small as 16KB!!!!) -->Fast execution of splitting and joining Requirements:: All you need is JAVA or JRE. You can download the latest JRE from Oracle http://java.com/en/download/windows_ie.jsp -
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Aliza Gaming API
An extensible development framework for roleplay games.
...Key Features: Modular Architecture, Rich Graphics and UI Components, Comprehensive Game Logic and Character Management, Environment and World-Building Tools, Statistical and Mathematical Utilities, Enhanced Debugging and Logging, Data Management and Integration, Integrated LLM for NPC Dialog, Cross-Platform Compatibility Dive into the world of game development with AlizaGameAPI. Download the latest version, explore the detailed documentation, and join the community of developers pushing the boundaries of gaming technology.
