Search Results for "data structures" - Page 3

Showing 132 open source projects for "data structures"

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  • 1
    JBerd

    JBerd

    Java tools for decoding and manipulating BER encoded ASN.1 Files

    A simple Java ASN BER decoder and profiler A tool for easy manipulation of BER encoded files. An "awk" for ASN.1 BER (for Unix people) or maybe a "notepad" for ASN.1 BER (for Windows people). Jberd (Java BER decoder) is a lightweight BER decoder and associated tools for interpreting and processing BER encoded ASN.1 files. The following facilities are provided: • JBerd Profiler. A tool for profiling the contents of BER encoded files • JBerd Flattener. A tool for converting BER...
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  • 2

    XLogo4Schools

    A Logo interpreter and programming environment specialized for schools

    A Logo interpreter and programming environment specialized for schools. It is a revised version of XLogo, published on http://xlogo.tuxfamily.org/. The Logo dialect is almost the same as Xlogo's, but some Logo commands were reimplemented to fit with the new programming environment and workspace. Some commands which were buggy in the original XLogo have been fixed. The interpreter works now more efficient due to the usage of more suitable data structures. The output of turtle graphics...
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    Downloads: 2 This Week
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  • 3
    Software Engineering Environment(SEE) is a general frame to customize and manage information. The default information set is the data for software development. Users can manage tables like Problem Reports, Change Requests, Working Log and Plans, Testing Cases, etc. It is written in servlet and data are saved in XML. Any data structures can be added and customized.
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  • 4
    S-Match

    S-Match

    S-Match is a semantic matching framework.

    S-Match is a semantic matching framework. S-Match takes any two tree like structures (such as database schemas, classifications, lightweight ontologies) and returns a set of correspondences between those tree nodes which semantically correspond to one another. S-Match contains implementations of the semantic matching, minimal semantic matching and structure preserving semantic matching algorithms. S-Match applies as a solution in many fields, including: information integration...
    Downloads: 3 This Week
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  • 5

    Chordalysis

    Log-linear analysis (data modelling) for high-dimensional data

    ===== Project moved to https://github.com/fpetitjean/Chordalysis ===== Log-linear analysis is the statistical method used to capture multi-way relationships between variables. However, due to its exponential nature, previous approaches did not allow scale-up to more than a dozen variables. We present here Chordalysis, a log-linear analysis method for big data. Chordalysis exploits recent discoveries in graph theory by representing complex models as compositions of triangular structures...
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  • 6
    Graphical Grammar Studio

    Graphical Grammar Studio

    An user friendly grammar tool for natural language processing tasks

    ... and applied. A grammar is organized in graphs of nodes. Nodes are used for consuming words from the input, for executing jumps to other graphs in the grammar or for creating annotations etc. GGS has a unique feature: It allows the user to write JavaScript code to be executed for nodes of the grammar. This is useful for checking grammatical agreements but not only. The user can: declare variables (including complex js structures), check for boolean conditions, use variables in annotations etc.
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  • 7
    JavaFeedParserCommon

    JavaFeedParserCommon

    Provides common classes, which can be used to parse news feeds

    "JavaFeedParserCommon" is a Java-library, which provides common classes and interfaces, which can be used by projects, which should allow to parse XML-based news feeds, such like RSS- or Atom-feeds.
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  • 8
    Calculates Natural Product(NP)-likeness of a molecule, i.e. the similarity of the molecule to the structure space covered by known natural products. NP-likeness is a useful criterion to screen compound libraries and to design new lead compounds. Maven dependancy: <dependency> <groupId>uk.ac.ebi.cheminformatics</groupId> <artifactId>NP-Likeness</artifactId> <version>2.1</version> </dependency> Required repository: <repositories> ...
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  • 9
    SecStAnT

    SecStAnT

    Secondary Structure Analysis Tool for data selection and statistics

    SecStAnT is a tool for the automatic creation of data-sets of structures from Protein Data Bank (PDB) with user-defined structural composition, and for the calculation of their internal variables distributions. SecStAnT is able to 1. Select from PDB data sets of structures based on user specified secondary structures (defined based on internal PDB classification or on DSSP) and/or sequence motives. 2. Build Data-sets at different levels of resolution (all atoms, only backbone, only Cα...
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  • 10

    Big Sack

    Big Sack: A lightweight Java Key/Value store with undo and disk cache.

    Big Sack is a Java persistence mechanism that allows storage of key value pairs following the popular Big Data paradigms. Its a very simple and straightforward way to bridge the gap between in-memory data structures and long-term storage. It has the convenience of Java SDK TreeMap and TreeSet classes and is used the same easy way, but it includes rollback through undo logging to checkpoint data so it does not wind up in an unknown state regardless of failures. Data storage in the exabyte range...
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  • 11

    Systems Glycobiology

    Glycosylation Network Analysis Toolbox (GNAT)

    GNAT is an open source, platform-independent MATLAB based toolbox. It is written in MATLAB and Java. It has been tested in Windows (Windows 7), Linux (Ubuntu), and Mac OS (X Lion) platforms. The original GNAT package (file GNAT.zip) provides functions for reading, writing, manipulation, visualization and simulation of glycan structures and glycosylation reaction networks (citation [1]). The second version of this software (GNATv2beta.zip) upgrades the original GNAT program with additional...
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  • 12
    SPARGEL

    SPARGEL

    An opensource Java graph library. Abandoned, ignore.

    Spargel is a Java graph library that puts its effort in having a rather small but powerful code basis. This is achieved by extending graphs via properties in form of vertice and edge maps. Because these maps are an individual implementation depending on the graph datastructure used, they are more memory efficient than using a Java HashMap. Currently spargel is in its early stages, but will soon support more tasks. As now, implemented are: * Adjecency graph data structures * Algorithms...
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  • 13
    earmark
    *** IMPORTANT NOTICE *** The source code of the earliest version of the EARMARK Data Structure is now available at http://www.github.com/essepuntato/EarmarkDataStructure Even if the SourceForge repository is still active, it concerns old versions of the API and it is not maintained anymore. *** SERVICE DESCRIPTION *** Extremely Annotational RDF Markup (EARMARK) is an ontological approach to the specification of markup structures on text content. It allows not only documents...
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  • 14

    XTarget

    Java API and Groovy Library for XML Scripting

    XTarget is an Groovy Library for automated editing of small XML Databases with Groovy scripts. It focuses on simultaneous editing of data, including structures like lists and maps, and linking between various XML files.
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  • 15
    Java library for operations with Iterables and other data structures in functional way.
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  • 16

    cognity

    A neural network library for Java.

    Cognity is an object-oriented neural network library for Java. It's goal is to provide easy-to-use, high level architecture for neural network computations along with reasonable performance.
    Downloads: 0 This Week
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  • 17
    Analysis

    Analysis

    Application to creating charts.

    The goal of project is delivering useful and simple tools to creating charts. Functionality is provided by modules/plugins (OSGi technology). It allows you to create your plugins or customize Analysis application (by changing installed plugins in application). The Application, thanks to JAVA technology, is portable on the most operating system. In Files page you can find the application and also patches to its.
    Downloads: 2 This Week
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  • 18
    This project provides a set of libraries written in Java to easily manipulate Multi-Criteria Decision Aid (MCDA) concepts, especially related to outranking methods, and XMCDA files.
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  • 19
    Information System to get an inventory about Prehistoric Enclosures.
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  • 20
    Project provides a set of concurrent building blocks (Java & C/C++) that can be used to develop parallel/multi-threaded applications. Components are grouped into 4 categories: 1.Data Structures 2. Parallel Patterns 3.Parallel functions 4.Atomics and STM
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  • 21
    Gavrog stands for "Generation, Analysis and Visualization of Reticular Ornaments using Gavrog". It is a Java library together with a suite of interactive applications for the study of periodic net-like structures in space and their applications.
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  • 22

    opmarshall

    code generator to marshall/unmarshall C and C++ data structures

    Opmarshall can encode/decode C and C++ data structures from/to a binary buffer. It's like CORBA or Google Protocol Buffer, but does not require an IDL (interface description language). Instead, your objects are simply defined in C/C++, which means that you use the SAME types in your code and on the wire (if you want to call remote systems).
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  • 23
    AlgoExplorer is a dynamic data structures viewer for Java. It allows the visualization of data structure of a Java program, allowing you to see how objects, handled by the algorithms, interact with each other and how they are related and linked. The project has been moved on: http://code.google.com/p/algoexplorer/
    Downloads: 0 This Week
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  • 24
    Geom4J is a computational geometry library for Java. It contains implementation of the most important computational geometry data structures and algorithms coded in pure Java, designed for ease of use and optimized for performance.
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  • 25
    A simple tool for sketching out ontology structures, including OWL export. Developed at the University of Manchester as a third-year project.
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