Search Results for "pdf data mining" - Page 2
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Showing 311 open source projects for "pdf data mining"
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A database administration tool, suitable as front-end for your Teradata relational database. Used to easily query, update and administer your database, create reports and synchronize data.
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miRDeep*
MiRDeep*
Please cite: An, J., Lai, J., Lehman, M.L. and Nelson, C.C. (2013) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acids Res, 41, 727-737. We will create index for you if you tell us your interested species (j.an@qut.edu.au). download command line version "MDS_command_line_Vxx.zip" clicking "Browse All Files" please find miRPlant in sourceforge for plant miRNA prediction. -
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ADAMS
ADAMS is a workflow engine for building complex knowledge workflows.
ADAMS is a flexible workflow engine aimed at quickly building and maintaining data-driven, reactive workflows, easily integrated into business processes. Instead of placing operators on a canvas and manually connecting them, a tree structure and flow control operators determine how data is processed (sequentially/parallel). This allows rapid development and easy maintenance of large workflows, with hundreds or thousands of operators. Operators include machine learning (WEKA, MOA, MEKA)... -
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123VCF
An Intuitive and Efficient Tool for VCF file filtration
123VCF has been developed to make the filtration step of VCF files efficient and more importantly easy to understand. It can be used in the most important step of whole exome/genome sequencing data analysis in the research and also clinical settings. User manual: https://dl.adbioinformatics.net/123VCF/123VCF_Manual.ver2.pdf If you use 123VCF, please cite its paper: Eidi, M., Abdolalizadeh, S., Moeini, S. et al. 123VCF: an intuitive and efficient tool for filtering VCF files. BMC Bioinformatics 25, 68 (2024). https://doi.org/10.1186/s12859-024-05661-5 _____________________________________ Authors: Milad Eidi, Samaneh Abdolalizadeh, Soheila Moeini Supervisors: Javad Zahiri, PhD - Masoud Garshasbi, PhD Department of Neuroscience, University of California San Diego, California, USA Department of Medical Genetics, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, Iran -
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DataMelt
Computation and Visualization environment
DataMelt (or "DMelt") is an environment for numeric computation, data analysis, computational statistics, and data visualization. This Java multiplatform program is integrated with several scripting languages such as Jython (Python), Groovy, JRuby, BeanShell. DMelt can be used to plot functions and data in 2D and 3D, perform statistical tests, data mining, numeric computations, function minimization, linear algebra, solving systems of linear and differential equations. ... -
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Merge to PDF
Simple portable Java app to merge single images and documents to PDF
Portable Java app to merge single PDF documents and JPG images to one PDF document. Standalone app include own Java. * Application is in the BETA version - please report bugs and issues on Tickets page. * -
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Rachota
Easy-to-use personal time tracking application for Windows and Unix
Rachota is a portable application for time-tracking your work on different projects. It runs on Windows, Linux, Solaris and Mac. Rachota displays time data in diagram form, creates customized reports or invoices and provides suggestions to increase your efficiency. -
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Common Resource Grep - crgrep
Common Resource Grep
CRGREP searches for matching text in databases, various document formats, archives and other difficult to access resources. A command line tool for name and content text matching in database tables, plain files, MS Office documents, PDF, archives, MP3 audio, image meta-data, scanned documents, maven dependencies and web resources. CRGREP will search resources within resources of any arbitrary combination or depth, so text within a document within a zip archive, and so on. Here you will find binary downloads and discussion (https://sourceforge.net/p/crgrep/discussion/) . ... -
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RTextDoc
An editor for structured documents
RTextDoc is an editor for structured text documents such as LaTeX, AsciiDoc, DocBook. RTextDoc has proofreading capabilities: on-the-fly spelling, instant grammar checking and built-in free dictionaries. RTextDoc has syntax highlighting, bracket matching, folding, document structure browser for sections and labels, bookmarks, manager for LaTeX symbols, an editor for mathematical equations,integrated BibTeX database manager and several tools to convert LaTeX to HTML and back. AsciiDoc... -
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Divide and Conquer Treemaps
Divide and Conquer Treemap Visualisation
The project develops new new techniques and algorithms for quickly partitioning and visualizing very large hierarchical structures within a variety of arbitrary shapes and space using Divide and Conquer approach for Treemaps. Related publications: https://www.sciencedirect.com/science/article/pii/S1045926X1500066X https://dl.acm.org/doi/pdf/10.1145/2493102.2493112 -
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OpenVigil
Open pharmacovigilance data extraction, mining and analysis tool
OpenVigil provides a webinterface to analyse pharmacovigilance data, i.e., spontanous or systematic collections of treatments (drugs) and observed adverse events ("drug side effects"). FDA Adverse Event Reporting System (AERS) and other pharmacovigilance data (e.g., Canadian or German) are supported. The OpenVigil web-based analysis tools offer several analysis modes like extraction, filtering, mining of data and analyses via measurements of disproportionality like proportional reporting ratio or reporting odds ratios) and export to spreadsheets programs like Microsoft Excel or statistics programs like R. ... -
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JKlubTV
Java Schach Turnierverwaltung / Java Chess Tournament Management
Manage chess round robin tournaments with JKlubTV Version 3.0.0-beta This application stores the data belonging to round robin into a SQLite database. It is intended for webmasters who want to easily manage a club tournament in their own chess club. The HTML tables that are to be published for the website will be created easily by the application. Automatically calculate the total points, Sonneborn Berger points of each player, as well as their sequence DWZ, and sorts the HTML table by the calculated Rangliste.Desweiteren it is possible the tables as to save PDF file. ... -
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The Lemur Project
Search engine and data mining applications and ClueWeb datasets.
The Lemur Project develops search engines, browser toolbars, text analysis tools, and data resources that support research and development of information retrieval and text mining software, including the Indri search engine in C++, the Galago search engine research framework in Java, the RankLib learning to rank library, ClueWeb09 and ClueWeb12 datasets and the Sifaka data mining application. -
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Swagger2Markup
Swagger to AsciiDoc or Markdown converter
The primary goal of this project is to simplify the generation of up-to-date RESTful API documentation by combining documentation that’s been hand-written with auto-generated API documentation produced by Swagger. The result is intended to be an up-to-date, easy-to-read, on- and offline user guide, comparable to GitHub’s API documentation. The output of Swagger2Markup can be used as an alternative to swagger-UI and can be served as static content. Swagger2Markup converts a Swagger JSON or... -
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proreports
Simple Reporting System
ProReports is simple reporting system designed to generate reports in popular office formats - PDF, XLS, RTF, HTML, TXT, XML, JSON, CSV, PNG, GIF. These reports are generated based on the definition in the internal database system. ProReports supports jrxml (JasperReport) format. This type of report templates can be prepared in external editor, such as iReport. Also user can prepare report in internal format of ProReports (simple Visual Programming Language mixed with PHP5 and JAVA or... -
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MagicalPdfEditor
This is a small PDF editor based on OpenPdf core and AndroidPdfViewer
This is a small PDF editor based on OpenPDF Core and AndroidPdfViewer. As there is not many open-source easy working PDF editors and PDF wizards, I decided to create a simple directory to resolve my issues. Here I have worked on two separate cores, add some functionality to them, and combined them together to achieve my target. I am working on this repo, any help will be appreciated. Just clone the project and trance the source code, It's really easy and clear. All functionality in... -
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PDFLayoutTextStripper
Converts a pdf file into a text file while keeping the layout
Converts a PDF file into a text file while keeping the layout of the original PDF. Useful to extract the content from a table or a form in a PDF file. PDFLayoutTextStripper is a subclass of PDFTextStripper class (from the Apache PDFBox library). -
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ADaMSoft
Open Source and data mining software
ADaMSoft is a free and Open Source Data Mining software developed in Java. It contains data management methods and it can create ready to use reports. It can read data from several sources and it can write the results in different formats. -
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DynaQ
Innovative text document search. http://dynaq.opendfki.de for details.
The goal of DynaQ is to develop an inquiry system to explore the personal information space, supporting you with the searching paradigm 'orienteering'. DynaQ is a (desktop)search engine with enhanced functionality for file, email and blog search. Look at our GitLab homepage for sourcecode and documentation: http://dynaq.opendfki.de -
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VIKAMINE is a flexible environment for visual analytics, data mining and business intelligence - implemented in pure Java. It features several powerful visualization and mining methods, and can utilize background knowledge.
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EncCon Tree Visualization
A Enclosure+Connection technique
An Enclosure+Connection technique for layout and navigation of Hierarchical Information. The layout uses rectangular enclosure partitioning to ensure the space efficiency, and the navigation is a focus+context navigation technique using semi-transparency approach. Related Publications: https://opus.lib.uts.edu.au/bitstream/10453/4003/3/2005003228.pdf -
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latexdraw
A vector drawing editor for LaTeX (JavaFX)
LaTeXDraw is a graphical drawing editor for LaTeX. LaTeXDraw can be used to 1) generate PSTricks code; 2) directly create PDF or PS pictures. LaTeXDraw runs on top of Linux, Windows, and Mac OS X. Using the MacOSX installer, you may face this error: “LaTeXDraw” is damaged and can't be opened. You should eject the disk image. -
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Open Source Data Quality and Profiling
World's first open source data quality & data preparation project
This project is dedicated to open source data quality and data preparation solutions. Data Quality includes profiling, filtering, governance, similarity check, data enrichment alteration, real time alerting, basket analysis, bubble chart Warehouse validation, single customer view etc. defined by Strategy. This tool is developing high performance integrated data management platform which will seamlessly do Data Integration, Data Profiling, Data Quality, Data Preparation, Dummy Data... -
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LaTeXDraw
Vector drawing program for LaTeX using PSTricks
LaTeXDraw is a graphical drawing editor for LaTeX. LaTeXDraw can be used to 1) generate PSTricks code; 2) directly create PDF or PS pictures. -
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PDF Guru
Merge images and PDFs to a single PDF
PDF Guru is a simple in use program for merging multiple images and PDF files into a single compact PDF file. It is capable of selecting specific PDF pages or range of pages, which lets you have more control on the output file. Be able to produce compacted, smaller sized files in any operating system. Its features makes it a great, must have, tool for everyone.
