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FONZIE is a bioinformatic tool written in Python developed for the genetic cartography speciality. FONZIE allow as well to find markers on a set of sequences than to find associate oligonucleotides. http://www.biomedcentral.com/1756-0500/3/322/abstra
Methods and testing of methods for automatic analysis of in situ cyclic
voltammetry data.
This, at least initially, is the code from my masters thesis, which was
done as a contribution to a larger project called Aevum. Aevum is being
developed at t
A python package to find repetitive format pattern in HTML pages and extract information from them using this pattern. The idea is that in pages that have some kind of a list, there will be a repetitive pattern for the human eye (the page format).
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Data mines the voting record and other actions of Members of the UK Parliament. Extracts information from the parliament website and stores it in a database. Provides tools to analyse the information, producing statistics and tables about the MPs.
ngram is a module to compute the similarity between two strings. It is different to python's "difflib.SequenceMatcher" in that it cares more about the size of both strings. ngram is an port and extension of the perl module called "String::Trigram
A spread sheet engine running over python. Any formula is pure python! You can do Macro in python and include any python package like NumPy. There is bult-in functions like D([list]) which automatically extend the list in cells.
Transana is a cross-platform tool for the transcription and qualitative analysis of audio and video data. It also provides the ability to identify and organize analytically interesting portions of videos, as well as attach keywords to those video clips.
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The Varro toolkit is a system for identifying and frequently recurring unordered subtrees in semi-structured data. It is mostly for linguistics but has applications in semi-structured data mining too.
FreeBrain will be an application for the analysis of 2D neurophysiological signals, like heart-rate, EEG or eyemovements. It is aimed at those who want intuitive or free software and those who want a customizeble tool that can handle mixed datasets.
A HTML scraper that uses machine learning frameworks to extract labelled fields from raw HTML. The project also involves the development of a tool to display the semi structured data generated by the scraper component.
A Python function library to extract EEG feature from EEG time series in standard Python and numpy data structure. Features include classical spectral analysis, entropies, fractal dimensions, DFA, inter-channel synchrony and order, etc.
ConDEnSE (Confidential Data Enabled Statistical Exploration) will be a web-based environment for statistical analysis of confidential data from various database sources, based on Plone and R, and using the Jackknife method of confidentiality protection.
Everyday Software for the Researcher of Restricted Means: This project is intended to offer scientists and students with small budgets advanced versions of aqua-built desktop-editing, graphics and statistical applications for MacOSX.
This project is a python script to abstract S.M.A.R.T. messages from /var/log/messages (from the smartd daemon) into .csv file(s), one for each disk, suitable for graphing.