Showing 19 open source projects for "net-tools"

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    miRDP2

    miRDP2

    Accurately and fast analyzing microRNAs transcriptome in plants

    ...We have tested miRDP2 to analyze miRNA transcriptomes in such plants with gradually increased genome size as Arabidopsis, rice, tomato, maize and wheat. Compared with miRDeep-P and several other computational tools, miRDP2 processed NGS data with superior speed. By incorporating newly updated plant miRNA annotation criteria, the accuracy of miRDP2 is also markedly improved. Our results demonstrate miRDP2 as a fast and accurate tool for analyzing the miRNA transcriptome in plants. Reference: https://doi.org/10.1093/bioinformatics/bty972
    Downloads: 4 This Week
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  • 2

    BioC

    We describe a simple XML format to share text documents and annotation

    ...Allows a large number of different annotations to be represented. Project files contain: - simple code to hold/read/write data and perform sample processing. - BioC-formatted corpora - BioC tools that work with BioC corpora BioC goals - simplicity - interoperability - broad use - reuse There should be little investment required to learn to use a format or a software module to process that format. We are interested in reuse, and we focus on common NLP tasks that are broadly useful for textmining.
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    Downloads: 24 This Week
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  • 3

    Automalator

    State Dependency deconstructor and mapper for C source code.

    ...Implicit in the definition of a state machine is a network of dependencies between the states. The Automalator * deconstructs the C code into the core state machine * collates the transactions into the dependency net * generates a diagram-format file with the states and dependencies as the nodes and edges. Pre-requisites * Perl - tested with versions 5.12.3, 5.14.2 and 5.20.2, Windows, Linux and MAC * Get the Automalator by downloading the zip, or checking out or exporting the SVN trunk * copy the source code of interest into "project.c" * windows - double-click "src2map.bat" * linux & MAC - navigate the command line to the "project" folder, then run "src2map.sh" * open "project.gml" file with diagramming software.
    Downloads: 0 This Week
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  • 4
    NG-CloudMS

    NG-CloudMS

    Next Gen Cloud Management System (NG-CloudMS)

    Next Gen Cloud Management System (NG-CloudMS) is a new web based end-to-end OCX management tool that is distributed by Opt/Net under GNU Public License (GPL). This prototype provides near real-time visibility of the networks and cloud infrastructures and interconnected computing and data storage resources. It therefore can assist the operators with visualisation and localization of the causes of potential incidents.
    Downloads: 0 This Week
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  • 5
    A resource for political accountability; a compilation of statistics and information on Canadian Members of Parliament, and possibly other levels of government. The project includes the website code, as well as the tools used to extract the informati
    Downloads: 0 This Week
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  • 6
    A set of Unix command line tools for quick and convenient batch processing of tabular text files (a.k.a., tab-delimited, csv, or flat file format) with a header line. Provides delimiter and compression detection, column reference by name. * tblmap: per-line ("map") computation: derive columns through an expression, delete, reorder, filter rows. * tblred: compute ("reduce") aggregations (e.g., sum, average) over groups defined by key columns
    Downloads: 0 This Week
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  • 7
    A set of command line tools to extract, manipulate, and present multidimensional data. These tools are targeted specifically at summarizing results of simulation experiments.
    Downloads: 0 This Week
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  • 8
    Data mines the voting record and other actions of Members of the UK Parliament. Extracts information from the parliament website and stores it in a database. Provides tools to analyse the information, producing statistics and tables about the MPs.
    Downloads: 0 This Week
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  • 9

    Byte Investigator

    Scripts for parsing and general use in Computer Forensics - Octane Lab

    ...Byte Investigator The Byte Investigator project from Octane Labs was born in order to be a parsing toolkit for several Windows structures (files and file system structures). These Perl script tools are useful tools for Computer Forensics professionals and Information Security researchers.
    Downloads: 0 This Week
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  • 10
    The project is aiming to do two things: track the total transit time it takes a news story to travel from site A to site Z across the net and we'll be indexing the content of the article at each hop and tracking the morphing of the content as it goes
    Downloads: 0 This Week
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  • 11
    Neurospaces is a development center for tools in computational neuroscience. See http://www.neurospaces.org/
    Downloads: 0 This Week
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  • 12
    A generic geospatial analysis and viewing capability using Perl scripts that provides the foundation and structure for readily creating KML data files from disparate data sources. KML files can be read and viewed by Google Earth and other tools.
    Downloads: 1 This Week
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  • 13
    TextMine is for the Perl hacker who is grappling with the problems of managing unstructured text from various sources. You can use these text mining tools to search the Web, index text, extract entities, categorize your e-mail, and summarize documents.
    Downloads: 0 This Week
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  • 14
    LT4eL (Language Technology for e-Learning) develops a framework of multilingual language technology tools and semantic web techniques for improving the retrieval and the metadata annotation of learning material.
    Downloads: 0 This Week
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  • 15
    We moved to https://github.com/sueswe/pzgtools Perl-Programs to extract information (and visualize them with gnuplot) from data-files from the PZG Particle Sampler from "rr-elektronik" (see http://www.rr-elektronik.de). Linux/KDE-version, GUI written in QT or Gambas. Win32-ver: pzg-tools.npage.de
    Downloads: 0 This Week
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  • 16
    hypKNOWsys aims at developing a Java-based workbench for knowledge discovery and knowledge management. Currently, hypKNOWsys has released two intermediate tools: DIAsDEM Workbench (text mining for semantic tagging) and WUMprep (Web mining pre-processing)
    Downloads: 0 This Week
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  • 17
    The Genomic Diversity and Phenotype Data Model (GDPDM) captures molecular and phenotypic diversity data. MySQL databases are used to implement the schema. This project develops software tools (written in Java, Perl, etc.) associated with this model.
    Downloads: 0 This Week
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  • 18
    BEE
    The BEE Project is a suite of tools supporting Business Intelligence project implementation including ETL tool and OLAP server and a thin client. The ROLAP server ensures multipass SQL generation and powerful cache management (utilizes MySQL RDBMS).
    Downloads: 0 This Week
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  • 19
    Basti Tools
    Downloads: 0 This Week
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