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Executable program that measures sizes and other properties of colonies arrayed in a grid format (intended for 768, 384, or 96 colonies on agar plates) from jpeg images
The NITE XML Toolkit supports the creation, analysis, and browsing of annotated multimodal, text, or spoken language corpora, and represents both timing and rich linguistic structure. It contains libraries for developers and some end user tools.
This is a MATLAB toolbox for the quality control and scoring of EMAP and SGA genetic interaction data. It includes a graphical user interface and some automatic plot-generating tools.
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Siafu simulates individual agents and their context, from home to city-wide scenarios. As a developer, you use the API to write your simulation for the purposes of data-set generation, test or visualization, optionally hooking it to your own application.
Data mining tool for sequences (e.g. trajectories on a map, visited web pages, etc.) that creates a succinct description of the sequences, given a taxonomy (e.g. regions and sub-regions in the map, categories and sub-categories of pages, etc.).
Regexp testing tool allows to apply group of regexps to huge arrays of data (millions or so) in order to investigate search or search/replacement possibilities of regexp group.
library for capturing, storing and visualizing timeseries data
The JTimeSeries has moved to github
Please go to https://github.com/JTimeSeries/jtimeseries
The SourceForge copy has not been maintained since Sep 2012
A java library to assist with capturing and storing timeseries data/metrics. Provides facilities to publish timeseries data across a network, a lightweight server to persist series data, and client user interface components for real time visualization
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OpenSHORE is an XML based Semantic Document Repository (SDR) with a free definable meta model that builds up a semantic network from sections and relations in documents. The acronym SHORE means Semantic Hypertext Object Repository.
Ontea - Pattern based Semantic Annotation Platform. Ontea search or create semantic meta data from text or documents using pattern based approaches. Implementation currently includes regular expressions (regex) patterns
JGraph is the most powerful, lightweight, feature-rich, and thoroughly documented open-source graph component available for Java. See the project homepage at www.jgraph.com for information and downloads.
A lyrical analysis and classification tool focused specifically on rhyming style in rap lyrics. Functions include phonetic transcription, rhyme visualization, and rapper classification.
Contextor is a light-weight simple-to-use Java based library to help developers and researchers working with the general concept of a resource; as examples, resources can be text resources, web resources, images and videos.
Example-based Modeling (EMO) is an tool to create data models, with examples, using a web interface. You interactively create a web-accessible database of models and samples for those models. A white paper describes the underlying assumptions.
Ex-Crawler is divided into 3 subprojects (Crawler Daemon, distributed gui Client, (web) search engine) which together provide a flexible and powerful search engine supporting distributed computing. More informations: http://ex-crawler.sourceforge.net
Open data mining platform. Provides common architecture for algorithms of various types. Efficient processing of arbitrarily large volumes of data thanks to data streaming. Weka and Rseslib partially integrated. (www.debellor.org)
Cyberinfrastructure Shell (CIShell) is an open source, community-driven framework/application for the integration and utilization of datasets, algorithms, tools, and computing resources. Algorithms can be integrated using most programming languages.
With the "xix" library, GATE functionality is available in XQuery (via an MXQuery extension). OpenCalais invocation is supported, too. -- Source code at http://sgv-jenkins-01.ethz.ch/job/xixlib/ws/-- "Show project details" for instruction
ViSBARD (Visual System for Browsing, Analysis, and Retrieval of Data) is an interactive visualization and analysis tool for space physics data. It provides an integrated 3-D/2-D environment to analyze measurements across many spacecraft and MHD models.
easy fusion is a java-based framework that intends to automatically deploy and control information fusion systems (IFS) on distributed and dynamic resources.